Skip to main content

Investigating Central Tolerance With Reaggregate Thymus Organ Cultures

  • Protocol
Immunological Tolerance

Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 380))

Abstract

In the thymus, immature CD4+8+ thymocytes expressing randomly rearranged T-cell receptor α- and β-chain genes undergo positive and negative selection events based on their ability to recognize self-peptide/major histocompatibility complex (MHC) molecules expressed by thymic stromal cells. In vivo analysis of the role of thymic stromal cells during intrathymic selection is made difficult by the cellular complexity of the thymic microenvironment in the steady-state adult thymus, and by the lack of appropriate targeting strategies to manipulate gene expression in particular thymic stromal compartments. We have shown that the thymic microenvironment can be readily manipulated in vitro through the use of reaggregate thymus organ cultures, which allow the preparation of three-dimensional thymus lobes from defined stromal and lymphoid cells. Although other in vitro systems support some aspects of T-cell development, reaggregate thymus organ culture remains the only in vitro system able to support efficient MHC class I and II-mediated thymocyte selection events, and so can be used as an effective tool to study the cellular and molecular regulation of positive and negative selection in the thymus.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Surh, D. and Sprent, J. (1995) T-cell apoptosis detected in situ during positive and negative selection in the thymus. Nature 372, 100–103.

    Article  Google Scholar 

  2. Jameson, S. C., Hogquist, K. A., and Bevan, M. J. (1995) Positive selection of thymocytes. Ann. Rev. Immunol. 13, 93–126.

    Article  CAS  Google Scholar 

  3. Palmer, E. (2003) Negative selection: clearing out the bad apples from the T-cell repertoire. Nat. Rev. Immunol. 3, 383–391.

    Article  PubMed  CAS  Google Scholar 

  4. Hogquist, K. A., Baldwin, T. A., and Jameson, S. C. (2005) Central tolerance: learning self-control in the thymus. Nat. Rev. Immunol. 5, 772–782.

    Article  PubMed  CAS  Google Scholar 

  5. von Boehmer, H., Teh, H. S., and Kisielow, P (1989) The thymus selects the use-ful, neglects the useless and destroys the harmful. Immunol. Today 10, 57–61.

    Article  Google Scholar 

  6. Anderson, G. and Jenkinson, E. J. (2001) Lymphostromal interactions in thymic development and function. Nat. Rev. Immunol. 1, 31–40.

    Article  PubMed  CAS  Google Scholar 

  7. Levin, S. D., Anderson, S. J., Forbush, K. A., and Perlmutter, R. M. (1993) A dominant-negative transgene defines a role for p56lck in thymopoiesis. EMBO J. 12, 1671–1680.

    PubMed  CAS  Google Scholar 

  8. Wolfer, A., Wilson, A., Nemir, M., MacDonald, H. R., and Radtke, F. (2002) Inactivation of Notch 1 impairs VDJbeta rearrangement and allows pre-TCR-independent survival of early alpha beta Lineage Thymocytes. Immunity 16, 869–879.

    Article  PubMed  CAS  Google Scholar 

  9. Zuniga-Pflucker, J. (2004) T-cell development made simple. Nat. Rev. Immunol. 4, 67–72.

    Article  PubMed  CAS  Google Scholar 

  10. Schmitt, T. M. and Zuniga-Pflucker, J. (2002) Induction of T cell develop-ment from hematopoietic progenitor cells by delta-like-1 in vitro. Immunity 17, 749–756.

    Article  PubMed  CAS  Google Scholar 

  11. Jenkinson, E. J., Anderson, G., and Owen, J. J. T. (1992) Studies on T cell maturation on defined thymic stromal cell populations in vitro. J. Exp. Med. 176, 845–853.

    Article  PubMed  CAS  Google Scholar 

  12. Anderson, G., Partington, K. M., and Jenkinson, E. J. (1998) Differential effects of peptide diversity and stromal cell type in positive and negative selection in the thymus. J. Immunol. 161, 6599–6603.

    PubMed  CAS  Google Scholar 

  13. Hare, K. J., Pongrac’z, J., Jenkinson, E. J., and Anderson, G. (2003) Modeling TCR signaling complex formation in positive selection. J. Immunol. 171, 2825–2831.

    PubMed  CAS  Google Scholar 

  14. Jenkinson, E. J., Franchi, L. L., Kingston, R., and Owen, J. J. T. (1982) Effect of deoxyguanosine on lymphopoiesis in the developing thymus rudiment in vitro: application in the production of chimeric thymus rudiments. Eur. J. Immunol. 12, 583–587.

    Article  PubMed  CAS  Google Scholar 

  15. Volkmann, A., Zal, T., and Stockinger, B. (1997) Antigen-presenting cells in the thymus that can negatively select MHC class II-restricted T cells recognizing a circulating self-antigen. J. Immunol. 158, 693–706.

    PubMed  CAS  Google Scholar 

  16. Hare, K. J., Jenkinson, E. J., and Anderson, G. (1999) CD69 expression discriminates MHC-dependent and-independent stages of thymocyte positive selection. J. Immunol. 162, 3978–3983.

    PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2007 Humana Press Inc., Totowa, NJ

About this protocol

Cite this protocol

Anderson, G., Jenkinson, E.J. (2007). Investigating Central Tolerance With Reaggregate Thymus Organ Cultures. In: Fairchild, P.J. (eds) Immunological Tolerance. Methods in Molecular Biology™, vol 380. Humana Press. https://doi.org/10.1007/978-1-59745-395-0_11

Download citation

  • DOI: https://doi.org/10.1007/978-1-59745-395-0_11

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-58829-652-8

  • Online ISBN: 978-1-59745-395-0

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics