Skip to main content

Transport Assays and Permeability in Pathogenic Mycobacteria

  • Protocol
  • First Online:
Mycobacteria Protocols

Part of the book series: Methods in Molecular Biology ((MIMB,volume 465))

Abstract

Mycobacteria produce an effective permeability layer that consists of a mycolic acid–containing cell wall. This protection confers a natural resistance to many chemical agents and results in a low permeability toward both hydrophilic and lipophilic agents. The permeability of cells is classically measured using methods that generally need cell suspensions and are hazardous with pathogens (e.g., nutrient and antibiotic uptake). A major problem encountered with mycobacteria is their propensity to form aggregates; the addition of detergent to the cell suspension is not recommended as this disorganizes the cell envelope, rendering it more permeable to antibiotics. To circumvent this problem, growing cells are uniformly labeled with [3H]-uracil, allowing a quantification of the aliquots; then, the uptake of [14C]-labeled probes is followed during the first minutes. To avoid the generation of aerosols associated with the commonly used filtration methods, centrifugation through an oil mixture is the preferred alternative technique for use with Mycobacterium tuberculosis.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Daffé, M., and Draper, P. (1998) The envelope layers of mycobacteria with reference to their pathogenicity. Adv. Microbiol. Physiol. 39, 131–203.

    Article  Google Scholar 

  2. Goren, M. B. and Brennan P. J. (1979) Mycobacterial lipids: chemistry and biological activities, in Tuberculosis (Youmans, G. P., ed.) W.B. Saunders, Philadelphia, pp 63–193.

    Google Scholar 

  3. Brennan, P., and Nikaido, H. (1995) The envelope of mycobacteria. Annu. Rev. Biochem. 64, 29–63.

    Article  PubMed  CAS  Google Scholar 

  4. Draper, P. (1998) The outer parts of the mycobacterial envelope as permeability barriers. Frontiers Biosci. 3:d1253–d1261.

    Google Scholar 

  5. Draper, P. and Daffé, M. (2005) The cell envelope of M. tuberculosis with special reference to the capsule and the outer permeability barrier, in Tuberculosis (Cole, S. T. et al., eds.) ASM Press, Washington, DC, pp 261–273.

    Google Scholar 

  6. Jarlier, V., Gutman L. and Nikaido, H. (1991) Interplay of cell wall barrier and beta-lactamase activity determines high resistance to beta-lactam antibiotics in Mycobacterium chelonae. Antimicrob. Agents Chemother. 35, 1937–1939.

    Article  PubMed  CAS  Google Scholar 

  7. Trias, J., Jarlier, V., Benz, R. (1992) Porins in the cell wall of Mycobacterium chelonae. Science 258, 1479–1481.

    CAS  Google Scholar 

  8. Niederweis M. (2003) Mycobacterial porins—new channel proteins in unique outer membranes. Mol. Microbiol. 49, 1167–1177.

    Article  PubMed  CAS  Google Scholar 

  9. Nikaido, H., Kim S. H., and Rosenberg E.Y. (1993) Physical organization of lipids in the cell wall of Mycobacterium chelonae. Mol. Microbiol. 8, 1025–1030.

    Article  PubMed  CAS  Google Scholar 

  10. Jarlier, V. and Nikaido, H. (1994) Mycobacterial cell wall: structure and role in natural resistance to antibiotics. FEMS Microbiol. Lett. 123, 11–18.

    Article  PubMed  CAS  Google Scholar 

  11. Liu, J., Barry C. E. III, Besra, G. S., and Nikaido, H. (1996) Mycolic acid structure determines the fluidity of the mycobacterial cell wall. J. Biol. Chem. 271, 29545–29551.

    Article  PubMed  CAS  Google Scholar 

  12. Nikaido, H., (2001) Preventing drug access to targets: cell surface permeability barriers and active efflux in bacteria. Semin. Cell Dev. Biol. 12, 215–223.

    Article  PubMed  CAS  Google Scholar 

  13. Ortalo-Magné, A., Lemassu, A., Lanéelle, M.-A., Bardou, F., Silve, G., Gounon P., Marchal, G., and Daffé, M. (1996) Identification of the surface-exposed lipids on the cell envelopes of Mycobacterium tuberculosis and other mycobacterial species. J. Bacteriol. 178, 456–461.

    Google Scholar 

  14. Camacho, L. R., Constant, P., Raynaud, C., Lanéelle, M. A., Triccas, J., A., Gicquel, B., Daffé, M., and Guilhot, C. (2001) Analysis of the phthiocerol dimycocerosate locus of Mycobacterium tuberculosis. J. Biol. Chem. 276, 19845–19854.

    Article  PubMed  CAS  Google Scholar 

  15. Jarlier, V. and Nikaido, H. (1990) Permeability barrier to hydrophilic solutes in Mycobacterium chelonei. J. Bacteriol. 172, 1418–1423.

    PubMed  CAS  Google Scholar 

  16. Jackson, M., Raynaud, C., Lanéelle, M.-A., Guilhot, C., Laurent-Winter, C., Ensergueix, D., Gicquel, B., and Daffé, M. (1999) Inactivation of the antigen 85C gene profoundly affects and alters the permeability of the Mycobacterium tuberculosis cell envelope. Mol. Microbiol. 31, 1573–1587.

    Article  PubMed  CAS  Google Scholar 

  17. Liu, J., and Nikaido, H. (1999) A mutant of Mycobacterium smegmatis defective in the biosynthesis of mycolic acids accumulates meromycolates. Proc. Natl. Acad. Sci. U. S. A. 96, 4011–4016.

    Article  PubMed  CAS  Google Scholar 

  18. Wang, L., Slayden, R. A., Barry, C. E. III and Liu, J. (2000) Cell wall structure of a mutant of Mycobacterium smegmatis defective in the biosynthesis of mycolic acids. J. Biol. Chem. 10, 7224–7229.

    Article  Google Scholar 

  19. Liu, J., Rosenberg, Y. and Nikaido, H. (1995) Fluidity of the lipid domain of cell wall from Mycobacterium chelonae. Proc. Natl. Acad. Sci. U. S. A. 92, 11254–11258.

    Article  PubMed  CAS  Google Scholar 

  20. Yuan, Y., Crane D. C., Musser, J. M., Sreevatsan, S. and Barry, C. E. III (1997) MMAS-1, the branch point between cis- and trans- cyclopropane-containing oxygenated mycolates in Mycobacterium tuberculosis. J. Biol. Chem. 272, 10041–10049.

    Article  PubMed  CAS  Google Scholar 

  21. Dubnau, E., Chan, J., Raynaud, C., Mohan, V. P., Lanéelle, M.A., Yu, K., Quémard, A., Smith, I., and Daffé, M. (2000) Oxygenated mycolic acids are necessary for virulence of Mycobacterium tuberculosis in mice. Mol. Microbiol. 36, 630–637.

    Article  PubMed  CAS  Google Scholar 

  22. Stephan, J., Mailaender, C., Etienne, G., Daffé, M. and Niederweis, M. (2004) Multidrug resistance of a porin deletion mutant of Mycobacterium smegmatis. Antimicrob. Agents Chemother. 48, 4163–4170.

    Article  CAS  Google Scholar 

  23. Bardou, F., Raynaud, C., Ramos, C., Lanéelle, M.A., and Lanéelle, G. (1998) Mechanism of isoniazid uptake in Mycobacterium tuberculosis. Microbiology 144, 2539–2544.

    Article  PubMed  CAS  Google Scholar 

  24. Raynaud, C., Papavinasasundaram, K.G., Speight, R.A., Springer, B., Sander, P., Böttger, E.C., Colston, J.C. and Draper, P. (2002) The function of OmpATb, a pore- forming protein of Mycobacterium tuberculosis. Mol. Microbiol. 46, 191–201.

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Mamadou Daffé PhD .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2009 Humana Press, a part of Springer Science+Business Media, LLC

About this protocol

Cite this protocol

Lanéelle, MA., Daffé, M. (2009). Transport Assays and Permeability in Pathogenic Mycobacteria. In: Parish, T., Brown, A. (eds) Mycobacteria Protocols. Methods in Molecular Biology, vol 465. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-59745-207-6_9

Download citation

  • DOI: https://doi.org/10.1007/978-1-59745-207-6_9

  • Published:

  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-58829-889-8

  • Online ISBN: 978-1-59745-207-6

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics