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Analysis of Lipid Biosynthesis and Location

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Mycobacteria Protocols

Part of the book series: Methods in Molecular Biology ((MIMB,volume 465))

Abstract

A procedure for metabolic labeling of all cellular lipids starting with a culture of mycobacteria is described in this chapter using either a pulse-chase or a simple labeling experimental design. Three fractions are produced for subsequent lipid analysis: (1) the culture filtrate; (2) a readily released surface lipid fraction; and (3) the killed, labeled bacteria. A standardized, TLC-based method for general lipid analysis that can be used to quantify the labeling of all the mycobacterial lipids is given as well as a protocol for analyzing the fatty acyl moieties of the lipids.

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References

  1. Camacho LR, Constant P, Raynaud C, Laneelle MA, Triccas JA, Gicquel B, Daffe M & Guilhot C (2001). Analysis of the phthiocerol dimycocerosate locus of Mycobacterium tuberculosis: evidence that this lipid is involved in the cell wall permeability barrier. J Biol Chem; 276: 19845–19854.

    Article  PubMed  CAS  Google Scholar 

  2. Converse SE, Mougous JD, Leavell MD, Leary JA, Bertozzi CR & Cox JS (2003). MmpL8 is required for sulfolipid-1 biosynthesis and Mycobacterium tuberculosis virulence. Proc Nat Acad Sci USA; 100: 6121–6126.

    Article  PubMed  CAS  Google Scholar 

  3. Cox JS, Chen B, McNeil M & Jacobs WR Jr (1999). Complex lipid determines tissue-specific replication of Mycobacterium tuberculosis in mice. Nature; 402: 79–83.

    Article  PubMed  CAS  Google Scholar 

  4. Minnikin DE, Kremer L, Dover LG & Besra GS (2002). The methyl-branched fortifications of Mycobacterium tuberculosis. Chem Biol; 9: 545–553.

    Article  PubMed  CAS  Google Scholar 

  5. Mostowy S, Inwald J, Gordon S, Martin C, Warren R, Kremer K, Cousins D & Behr MA (2005). Revisiting the evolution of Mycobacterium bovis. J Bacteriol; 187: 6386–6395.

    Article  PubMed  CAS  Google Scholar 

  6. Schnappinger D, Ehrt S, Voskuil MI, Liu Y, Mangan JA, Monahan I, Dolganov G, Efron B, Butcher PD, Nathan C & Schoolnik GK (2003). Transcriptional adaptation of Mycobacterium tuberculosis within macrophages: insights into the phagosomal environment. J Exp Med; 198: 693–704.

    Article  PubMed  CAS  Google Scholar 

  7. Bloch K (1975). Fatty acid synthases from Mycobacterium phlei. Methods Enzymol; 35: 84–90.

    Article  PubMed  CAS  Google Scholar 

  8. Wood WI & Peterson DO (1981). Fatty acid synthase from Mycobacterium smegmatis. Methods Enzymol; 71: 110–116.

    Article  CAS  Google Scholar 

  9. Wheeler PR, Bulmer K & Ratledge C (1990). Enzymes for biosynthesis de novo and elongation of fatty acids in mycobacteria grown in host cells: is Mycobacterium leprae competent in fatty acid biosynthesis? J Gen Microbiol; 136: 211–217.

    PubMed  CAS  Google Scholar 

  10. Bloch K (1977). Control mechanisms for fatty acid synthesis in Mycobacterium smegmatis. Adv Enzymol Relat Areas Mol Biol; 45: 1–84.

    PubMed  CAS  Google Scholar 

  11. Fernandes ND & Kolattukudy PE (1998). A newly identified methyl-branched chain fatty acid synthesizing enzyme from Mycobacterium tuberculosis var. bovis BCG. J Biol Chem; 273: 2820–2828.

    Article  Google Scholar 

  12. Rainwater DL & Kolattukudy PE (1983). Synthesis of mycocerosic acids from methylmalonyl coenzyme A by cell-free extracts of Mycobacterium tuberculosis var. bovis BCG. J Biol Chem; 258: 2979–2985.

    PubMed  CAS  Google Scholar 

  13. Trivedi OA, Arora P, Vats A, Tickoo R, Sridharan V, Mohanty D & Gokhale RS (2005). Dissecting the mechanism and assembly of a complex virulence mycobacterial lipid. Mol Cell; 17: 631–643.

    Article  PubMed  CAS  Google Scholar 

  14. Slayden RA, Lee RE, Armour JW, Cooper AM, Orme IM, Brennan PJ & Besra GS (1996). Antimycobacterial action of thiolactomycin: an inhibitor of fatty acid and mycolic acid synthesis. Antimicrob Agents Chemother; 40: 2813–2819.

    PubMed  CAS  Google Scholar 

  15. Wheeler PR, Besra GS, Minnikin DE & Ratledge C (1993). Stimulation of mycolic acid biosynthesis by incorporation of cis-tetracos-5-enoic acid in a cell-wall preparation from Mycobacterium smegmatis. Biochim Biophys Acta; 1167: 182–188.

    Article  PubMed  CAS  Google Scholar 

  16. Lacave C, Quemard A & Laneelle G (1990). Cell-free synthesis of mycolic acids in Mycobacterium aurum: radioactivity distribution in newly synthesized acids and presence of cell wall in the system. Biochim Biophys Acta; 1045: 58–68.

    Article  PubMed  CAS  Google Scholar 

  17. Salman M, Lonsdale JT, Besra GS & Brennan PJ (1999). Phosphatidylinositol synthesis in mycobacteria. Biochim Biophys Acta; 1436: 437–450.

    Article  PubMed  CAS  Google Scholar 

  18. Banerjee A, Dubnau E, Quemard A, Balasubramanian V, Um KS, Wilson T, Collins D, de Lisle G & Jacobs WR Jr. (1994). InhA, a gene encoding a target for isoniazid and ethionamide in Mycobacterium tuberculosis. Science; 263: 200–227.

    Article  Google Scholar 

  19. Salman M, Brennan PJ & Lonsdale, JT (1999). Synthesis of mycolic acids of mycobacteria: an assessment of the cell-free system in light of the whole genome. Biochim Biophys Acta; 1437: 325–332.

    Article  PubMed  CAS  Google Scholar 

  20. Besra GS (1998). Preparation of cell-wall fractions from mycobacteria. Parish T & Stoker N, eds. Mycobacteria protocols, vol. 101. Humana Press, Totowa, NJ: 91–107.

    Google Scholar 

  21. Dobson G, Minnikin DE, Minnikin SM, Parlett JH & Goodfellow M (1985). Systematic analysis of complex mycobacterial lipids. Goodfellow M & Minnikin DE, eds. Chemical methods in bacterial systematics. Academic Press, London: 207–265.

    Google Scholar 

  22. Wheeler PR & Anderson PM (1996). Determination of the primary target for isoniazid in mycobacterial mycolic acid biosynthesis with Mycobacterium aurum A+. Biochem J; 318: 451–457.

    PubMed  CAS  Google Scholar 

  23. Kremer L & Besra GS (2005). A waxy tale, by Mycobacterium tuberculosis. Cole ST, Eisenach KD, McMurray DN & Jacobs WR, eds. Tuberculosis and the tubercle bacillus. ASM Press, Washington, DC: 287–307.

    Google Scholar 

  24. Draper P & Daffe M (2005). The cell envelope of Mycobacterium tuberculosis with special reference to the capsule and outer permeability barrier. Cole ST, Eisenach KD, McMurray DN & Jacobs WR, eds. Tuberculosis and the tubercle bacillus. ASM Press, Washington, DC: 261–274.

    Google Scholar 

  25. Goren MB (1970). Sulfolipid I of Mycobacterium tuberculosisstrain H37Rv. Purification and properties. Biochim Biophys Acta; 210: 116–126.

    Article  PubMed  CAS  Google Scholar 

  26. Sirakova TD, Thirumala AK, Dubey VS, Sprecher H & Kolattukudy PE (2001). The Mycobacterium tuberculosis pks2 gene encodes the synthase for the hepta- and octamethyl-branched fatty acids required for sulfolipid synthesis. J Biol Chem; 276: 16833–16839.

    Article  PubMed  CAS  Google Scholar 

  27. Qureshi N, Takayama K & Schnoes HK (1980). Purification of C30-56 fatty acids from Mycobacterium tuberculosis H37Ra. J Biol Chem; 255: 182–189.

    PubMed  CAS  Google Scholar 

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Acknowledgment

P.R.W. was supported through DEFRA funding.

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Correspondence to Paul Robert Wheeler Ph.D .

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© 2009 Humana Press, a part of Springer Science+Business Media, LLC

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Wheeler, P.R. (2009). Analysis of Lipid Biosynthesis and Location. In: Parish, T., Brown, A. (eds) Mycobacteria Protocols. Methods in Molecular Biology, vol 465. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-59745-207-6_5

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  • DOI: https://doi.org/10.1007/978-1-59745-207-6_5

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  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-58829-889-8

  • Online ISBN: 978-1-59745-207-6

  • eBook Packages: Springer Protocols

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