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In Vitro Assays to Measure SNARE-Mediated Vesicle Fusion

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Part of the book series: Methods in Molecular Biology ((MIMB,volume 440))

Summary

Membrane fusion is fundamental for a broad variety of physiological processes, such as synaptic transmission, fertilization, and viral entry. Intracellular fusion along the secretory and endocytic pathway is mediated by SNARE (soluble N-ethylmaleimide-sensitive factor attachment protein receptor) proteins. When recombinant v- and t-SNAREs are reconstituted into distinct liposome populations, membrane fusion can be monitored by either lipid or content mixing. The in vitro assays use fluorescence dequenching to measure vesicle fusion. The lipid-mixing assay is based on fluorescence resonance energy transfer between the fluorophores 7-nitro-2–1,3-benzoxadiazol-4-yl (NBD) and rhodamine, which are covalently coupled to lipids. Fusion of labeled v-SNARE liposomes with unlabeled t-SNARE liposomes increases the distance between NBD and rhodamine, increasing the NBD fluorescence. In the content-mixing assay, the water-soluble fluorophore 8-Hydroxypyrene-1,3,6-trisulfonic acid trisodium salt (HPTS) (pyranine) and its quencher p-Xylene-bis-pyridinium bromide (DPX) are incorporated into v-SNARE vesicles. The fusion of labeled v-SNARE vesicles with unlabeled t-SNARE vesicles dilutes the quencher and thus increases HPTS fluorescence. By controlling the lipid and protein composition, these assays provide important tools to detect fusion intermediates (e.g., hemifusion), and to elucidate the molecular mechanisms that regulate membrane fusion.

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References

  1. 1. Söllner, T., Whiteheart, S.W., Brunner, M., et al. (1993) SNAP receptors implicated in vesicle targeting and fusion. Nature 362, 318–324.

    Article  PubMed  Google Scholar 

  2. 2. Sutton, R.B., Fasshauer, D., Jahn, R., and Brunger, A.T. (1998) Crystal structure of a SNARE complex involved in synaptic exocytosis at 2.4 Å resolution. Nature 395, 347–353.

    Article  CAS  PubMed  Google Scholar 

  3. 3. Parlati, F., McNew, J.A., Fukuda, R., Miller, R., Söllner, T.H., and Rothman, J.E. (2000) Topological restriction of SNARE-dependent membrane fusion. Nature 407, 194–198.

    Article  CAS  PubMed  Google Scholar 

  4. 4. Weber, T., Zemelman, B.V., McNew, J.A., et al. (1998) SNAREpins: minimal machinery for membrane fusion. Cell 92, 759–772.

    Article  CAS  PubMed  Google Scholar 

  5. 5. Hu, C., Ahmed, M., Melia, T.J., Sollner, T.H., Mayer, T., and Rothman, J.E. (2003) Fusion of cells by flipped SNAREs. Science 300, 1745–1749.

    Article  CAS  PubMed  Google Scholar 

  6. 6. Struck, D.K., Hoekstra, D., and Pagano, R.E. (1981) Use of resonance energy transfer to monitor membrane fusion. Biochemistry 20, 4093–4099.

    Article  CAS  PubMed  Google Scholar 

  7. 7. Stryer, L., and Haugland, R.P. (1967) Energy transfer: a spectroscopic ruler. Proc. Natl. Acad. Sci. U. S. A. 58, 719–726.

    Article  CAS  PubMed  Google Scholar 

  8. 8. Parlati, F., Weber, T., McNew, J.A., Westermann, B., Söllner, T.H., and Rothman, J.E. (1999) Rapid and efficient fusion of phospholipid vesicles by the alpha-helical core of a SNARE complex in the absence of an N-terminal regulatory domain. Proc. Natl. Acad. Sci. U. S. A. 96, 12565–12570.

    Article  CAS  PubMed  Google Scholar 

  9. 9. Takamori, S., Holt, M., Stenius, K., et al. (2006) Molecular anatomy of a trafficking organelle. Cell 127, 831–846.

    Article  CAS  PubMed  Google Scholar 

  10. 10. Tucker, W.C., Weber, T., and Chapman, E.R. (2004) Reconstitution of Ca2+-regulated membrane fusion by Synaptotagmin and SNAREs. Science 304, 435–438.

    Article  CAS  PubMed  Google Scholar 

  11. 11. Schiavo, G., Matteoli, M., and Montecucco, C. (2000) Neurotoxins affecting neuroexocytosis. Physiol. Rev. 80, 717–766.

    CAS  PubMed  Google Scholar 

  12. 12. Yamasaki, S., Baumeister, A., Binz, T., et al. (1994) Cleavage of members of the Synaptobrevin/VAMP family by types D and F botulinal neurotoxins and tetanus toxin. J. Biol. Chem. 269, 12764–12772.

    CAS  PubMed  Google Scholar 

  13. 13. Daleke, D. L., Hong, K., and Papahadjopoulos, D. (1990) Endocytosis of liposomes by macrophages: binding, acidification and leakage of liposomes monitored by a new fluorescence assay. Biochim. Biophys. Acta 1024, 352–366.

    Article  CAS  PubMed  Google Scholar 

  14. 14. Barreto, J., and Lichtenberger, L.M. (1992) Vesicle acidification driven by a millionfold proton gradient: a model for acid influx through gastric cell membranes. Am. J. Physiol. 262, G30–G34.

    CAS  PubMed  Google Scholar 

  15. 15. Fukuda, R., McNew, J.A., Weber, T., et al. (2000) Functional architecture of an intracellular membrane t-SNARE. Nature 407, 198–202.

    Article  CAS  PubMed  Google Scholar 

  16. 16. McNew, J.A., Parlati, F., Fukuda, R., et al. (2000) Compartmental specificity of cellular membrane fusion encoded in SNARE proteins. Nature 407, 153–159.

    Article  CAS  PubMed  Google Scholar 

  17. 17. Schaffner, W., and Weissmann, C. (1973) A rapid, sensitive, and specific method for the determination of protein in dilute solution. Anal. Biochem. 56, 502–514.

    Article  CAS  PubMed  Google Scholar 

  18. 18. Nagle, J.F., and Tristram-Nagle, S. (2000) Structure of lipid bilayers. Biochim. Biophys. Acta 1469, 159–195.

    CAS  PubMed  Google Scholar 

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Acknowledgements

We would like to thank Jean Michel Krause for technical assistance. The work was support by National Institutes of Health grant NS 43391 (to T.H. Söllner).

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© 2008 Humana Press, a part of Springer Science+Business Media, LLC

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Kreye, S., Malsam, J., Söllner, T.H. (2008). In Vitro Assays to Measure SNARE-Mediated Vesicle Fusion. In: Ivanov, A.I. (eds) Exocytosis and Endocytosis. Methods in Molecular Biology, vol 440. Humana Press. https://doi.org/10.1007/978-1-59745-178-9_3

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  • DOI: https://doi.org/10.1007/978-1-59745-178-9_3

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-58829-865-2

  • Online ISBN: 978-1-59745-178-9

  • eBook Packages: Springer Protocols

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