Skip to main content

Flow Cytometry-Based Cell Type-Specific Assessment of Target Regulation by Pulmonary siRNA Delivery

  • Protocol
  • First Online:
Nanotechnology for Nucleic Acid Delivery

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1943))

  • 1479 Accesses

Abstract

Pulmonary siRNA delivery has attracted strong interest and has been reported to successfully mediate target gene knockdown in a number of disease models. However, the nature of the epithelial cells that eventually take up siRNA and the question if other lung cell types may also be transfected has so far been neglected. Therefore, we describe here a flow cytometry-based method using transgenic enhanced green fluorescence protein (EGFP) expressing mice for the differentiation of transfected lung cell populations based on their antigen expression.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Elbashir SM et al (2001) Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells. Nature 411:494–498

    Article  CAS  Google Scholar 

  2. Watts JK, Corey DR (2010) Clinical status of duplex RNA. Bioorg Med Chem Lett 20:3203–3207

    Article  CAS  Google Scholar 

  3. Dykxhoorn DM, Palliser D, Lieberman J (2006) The silent treatment: siRNAs as small molecule drugs. Gene Ther 13:541–552

    Article  CAS  Google Scholar 

  4. Lam JK-W, Liang W, Chan H-K (2012) Pulmonary delivery of therapeutic siRNA. Adv Drug Deliv Rev 64(1):1–15

    Article  CAS  Google Scholar 

  5. World Health Organization (2008) The top 10 causes of death (N°310, F. s., Ed.). WHO, New York City

    Google Scholar 

  6. Durcan N, Murphy C, Cryan SA (2008) Inhalable siRNA: potential as a therapeutic agent in the lungs. Mol Pharm 5:559–566

    Article  CAS  Google Scholar 

  7. Cryan SA, Sivadas N, Garcia-Contreras L (2007) In vivo animal models for drug delivery across the lung mucosal barrier. Adv Drug Deliv Rev 59:1133–1151

    Article  CAS  Google Scholar 

  8. Oberdorster G, Oberdorster E, Oberdorster J (2005) Nanotoxicology: an emerging discipline evolving from studies of ultrafine particles. Environ Health Perspect 113:823–839

    Article  CAS  Google Scholar 

  9. Birchall J (2007) Pulmonary delivery of nucleic acids. Expert Opin Drug Deliv 4:575–578

    Article  CAS  Google Scholar 

  10. Ferrari S et al (2001) Mucus altering agents as adjuncts for nonviral gene transfer to airway epithelium. Gene Ther 8:1380–1386

    Article  CAS  Google Scholar 

  11. Rosenecker J et al (2003) Interaction of bronchoalveolar lavage fluid with polyplexes and lipoplexes: analysing the role of proteins and glycoproteins. J Gene Med 5:49–60

    Article  CAS  Google Scholar 

  12. Dames P et al (2007) Targeted delivery of magnetic aerosol droplets to the lung. Nat Nanotechnol 2:495–499

    Article  Google Scholar 

  13. Jiang HL et al (2009) The suppression of lung tumorigenesis by aerosol-delivered folate-chitosan-graft-polyethylenimine/Akt1 shRNA complexes through the Akt signaling pathway. Biomaterials 30:5844–5852

    Article  CAS  Google Scholar 

  14. Davies LA et al (2007) Identification of transfected cell types following non-viral gene transfer to the murine lung. J Gene Med 9:184–196

    Article  CAS  Google Scholar 

  15. Merkel OM et al (2009) Nonviral siRNA delivery to the lung: investigation of PEG-PEI polyplexes and their in vivo performance. Mol Pharm 6:1246–1260

    Article  CAS  Google Scholar 

  16. Glud SZ et al (2009) Naked siLNA-mediated gene silencing of lung bronchoepithelium EGFP expression after intravenous administration. Oligonucleotides 19:163–168

    Article  CAS  Google Scholar 

  17. Howard KA et al (2006) RNA interference in vitro and in vivo using a novel chitosan/siRNA nanoparticle system. Mol Ther 14:476–484

    Article  CAS  Google Scholar 

  18. Nielsen EJ et al (2010) Pulmonary gene silencing in transgenic EGFP mice using aerosolised chitosan/siRNA nanoparticles. Pharm Res 27:2520–2527

    Article  CAS  Google Scholar 

  19. Corti M, Brody AR, Harrison JH (1996) Isolation and primary culture of murine alveolar type II cells. Am J Respir Cell Mol Biol 14:309–315

    Article  CAS  Google Scholar 

  20. Beyerle A et al (2011) Comparative in vivo study of poly(ethylene imine)/siRNA complexes for pulmonary delivery in mice. J Control Release 151(1):51–56

    Article  CAS  Google Scholar 

  21. Marsh LM et al (2009) Surface expression of CD74 by type II alveolar epithelial cells: a potential mechanism for macrophage migration inhibitory factor-induced epithelial repair. Am J Physiol Lung Cell Mol Physiol 296:L442–L452

    Article  CAS  Google Scholar 

  22. Rose SD et al (2005) Functional polarity is introduced by Dicer processing of short substrate RNAs. Nucleic Acids Res 33:4140–4156

    Article  CAS  Google Scholar 

Download references

Acknowledgments

This work was supported by “Meditrans,” an Integrated Project funded by the European Commission under the Sixth Framework (NMP4-CT-2006-026668). The authors are grateful to Tanja Dicke and Matthias Schiller for expert support.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Olivia M. Merkel .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2019 Springer Science+Business Media, LLC, part of Springer Nature

About this protocol

Check for updates. Verify currency and authenticity via CrossMark

Cite this protocol

Merkel, O.M., Marsh, L.M., Garn, H., Kissel, T. (2019). Flow Cytometry-Based Cell Type-Specific Assessment of Target Regulation by Pulmonary siRNA Delivery. In: Ogris, M., Sami, H. (eds) Nanotechnology for Nucleic Acid Delivery. Methods in Molecular Biology, vol 1943. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-9092-4_24

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-9092-4_24

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-9091-7

  • Online ISBN: 978-1-4939-9092-4

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics