Skip to main content

Purification of Developing Enamel Matrix Proteins Using Preparative SDS-PAGE

  • Protocol
  • First Online:

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1922))

Abstract

In this chapter we discuss the potential of preparative SDS-PAGE for use in purifying native developing enamel matrix proteins. We believe that the methodology has the potential to provide the relatively large-scale single-step purification of any enamel protein that can be resolved as a single band during analytical SDS-PAGE. Of course, a single band on analytical SDS-PAGE does not guarantee absolute purity as the band may be comprised of two or more proteins migrating at the same apparent molecular weight on the gel. Where absolute purity is required, the methodology can be used in conjunction with other techniques such as ion-exchange chromatography or reverse-phase chromatography. We do not see preparative SDS-PAGE replacing chromatographic methodologies but believe that it can provide another powerful tool to add to the battery of purification techniques already available to researchers in the field.

This is a preview of subscription content, log in via an institution.

Buying options

Protocol
USD   49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   169.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Hardcover Book
USD   219.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Springer Nature is developing a new tool to find and evaluate Protocols. Learn more

References

  1. Mechanic GL, Katz EP, Glimcher MJ (1967) The Sephadex gel filtration characteristics of the neutral soluble proteins of embryonic bovine enamel. Biochim Biophys Acta 133:97–113

    Article  CAS  Google Scholar 

  2. Belcourt AB, Fincham AG, Termine JD (1983) Bovine high molecular weight amelogenin proteins. Calcif Tissue Int 35:111–114

    Article  CAS  Google Scholar 

  3. Eggert FM, Allen GA, Burgess RC (1973) Amelogenins. Purification and partial characterization of proteins from developing bovine dental enamel. Biochem J 131:471–484

    Article  CAS  Google Scholar 

  4. Fincham AG (1979b) A simple procedure for the isolation of a major amelogenin polypeptide component. Biochem J 181:171–175

    Article  CAS  Google Scholar 

  5. Fukae M, Ijiri H, Tanabe T, Shimizu M (1979) Partial amino acid sequences of two proteins in developing porcine enamel. J Dent Res 58:1000–1001

    Article  CAS  Google Scholar 

  6. Shimazu S, Fukae M (1983) Enamel proteins. In: Suga S (ed) Mechanisms of tooth enamel formation. Quintessence Publishing Co, Inc, Tokyo

    Google Scholar 

  7. Hu CC, Fukae M, Uchida T, Qian Q, Zhang CH, Ryu OH, Tanabe T, Yamakoshi Y, Murakami C, Dohi N, Shimizu M, Simmer JP (1997) Sheathlin: cloning, cDNA/polypeptide sequences, and immunolocalization of porcine enamel sheath proteins. J Dent Res 76:648–657

    Article  CAS  Google Scholar 

  8. Hu JC, Yamakoshi Y, Yamakoshi F, Krebsbach PH, Simmer JP (2005) Proteomics and genetics of dental enamel. Cells Tissues Organs 181:219–231

    Article  CAS  Google Scholar 

  9. Limeback H, Simic A (1990) Biochemical characterization of stable high molecular-weight aggregates of amelogenins formed during porcine enamel development. Arch Oral Biol 35:459–468

    Article  CAS  Google Scholar 

  10. Yamakoshi Y, Hu JCC, Ryu OH, Tanabe T, Oida S, Fukae M, et al. (2001) A comprehensive strategy for purifying pig enamel proteins. In: Kobayashi I, Ozawa H (eds) Biomineralization: formation, diversity, evolution and application; Proceedings of the 8th International Symposium on Biomineralization; Niigata, Japan; Hadano, Japan: Tokai University Press; 2004

    Google Scholar 

  11. Yamakoshi Y, Tanabe T, Fukae M, Shimizu M (1994) Porcine amelogenins. Calcif Tissue Int 54:69–75

    Article  CAS  Google Scholar 

  12. Simmer JP, Fukae M, Tanabe T, Yamakoshi Y, Uchida T, Xue J, Margolis HC, Shimizu M, Dehart BC, Hu CC, Bartlett JD (1998) Purification, characterization, and cloning of enamel matrix serine proteinase 1. J Dent Res 77:377–386

    Article  CAS  Google Scholar 

  13. Yamakoshi Y, Hu JC, Zhang H, Iwata T, Yamakoshi F, and Simmer JP (2006) Proteomic analysis of enamel matrix using a two-dimensional protein fractionation system. Eur J Oral Sci 114 Suppl 1, 266–271. https://doi.org/10.1111/j.1600-0722.2006.00279.x

    Article  CAS  Google Scholar 

  14. Fincham AG (1979a) The amelogenin problem: a comparison of purified enamel matrix proteins. Calcif Tissue Int 27:65–73

    Article  CAS  Google Scholar 

  15. Fukae M, Tanabe T (1987) Nonamelogenin components of porcine enamel in the protein fraction free from the enamel crystals. Calcif Tissue Int 40:286–293

    Article  CAS  Google Scholar 

  16. Brookes SJ, Kirkham J, Lyngstadaas SP, Shore RC, Wood SR, Robinson C (2000) Spatially related amelogenin interactions in developing rat enamel as revealed by molecular cross-linking studies. Arch Oral Biol 45:937–943

    Article  CAS  Google Scholar 

  17. Gabe CM, Brookes SJ, Kirkham J (2017) Preparative SDS PAGE as an alternative to His-Tag purification of recombinant amelogenin. Front Physiol 8:424

    Article  Google Scholar 

  18. Sutton RMC, Stalcup AM (2000) Preparative electrophoresis. In: Wilson ID, Adlard ER, Cooke M, Poole CF (eds) Encyclopedia of separation science. Academic Press, San Diego, London

    Google Scholar 

Download references

Acknowledgments

Claire Gabe was supported by a University of Leeds 110 Anniversary Research Scholarship.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Steven J. Brookes .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2019 Springer Science+Business Media, LLC, part of Springer Nature

About this protocol

Check for updates. Verify currency and authenticity via CrossMark

Cite this protocol

Brookes, S.J., Gabe, C.M. (2019). Purification of Developing Enamel Matrix Proteins Using Preparative SDS-PAGE. In: Papagerakis, P. (eds) Odontogenesis. Methods in Molecular Biology, vol 1922. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-9012-2_25

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-9012-2_25

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-9011-5

  • Online ISBN: 978-1-4939-9012-2

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics