Abstract
Linkers of nucleoskeleton and cytoskeleton (LINC) complexes are conserved nuclear envelope (NE) spanning molecular bridges which mechanically integrate the nucleus with the cytoskeleton and mediate force transmission into the nucleoplasm. Despite their critical roles in fundamental cellular processes such as meiotic chromosome and nuclear positioning, the mechanism of LINC complex assembly in cells remains unclear. To begin to address this deficit, we recently developed z-scan fluorescence fluctuation spectroscopy (FFS) and brightness analysis as a method for quantifying the oligomeric states of fluorescent protein-tagged NE proteins including nesprins and SUN proteins. Since the homo-oligomerization of SUN2 is critical for its ability to interact with nesprins within the perinuclear space, the knowledge obtained through quantitative brightness experiments reveals important insights into the in vivo mechanisms of LINC complex assembly. Here we describe the procedure we use to determine the brightness of proteins in the NE of living cells. In addition to the measurement procedure, we discuss the instrumentation requirements and present the results of applying this procedure to measure the brightness of nesprin-2 and SUN2.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Abbreviations
- b :
-
Normalized brightness
- KASH:
-
Klarsicht, ANC-1, SYNE homology
- LINC:
-
Linker of nucleoskeleton and cytoskeleton
- N :
-
Number concentration
- NE:
-
Nuclear envelope
- SUN:
-
Sad1/UNC-84
References
Starr DA, Fridolfsson HN (2010) Interactions between nuclei and the cytoskeleton are mediated by SUN-KASH nuclear-envelope bridges. Annu Rev Cell Dev Biol 26:421–444
Alam S, Lovett DB, Dickinson RB et al (2014) Nuclear forces and cell mechanosensing. Prog Mol Biol Transl Sci 126:205–215
Kaminski A, Fedorchak GR, Lammerding J (2014) The cellular mastermind(?)—mechanotransduction and the nucleus. Prog Mol Biol Transl Sci 126:157–203
Luxton GWG, Starr DA (2014) KASHing up with the nucleus: novel functional roles of KASH proteins at the cytoplasmic surface of the nucleus. Curr Opin Cell Biol 28:69–75
Meinke P, Schirmer EC (2015) LINC’ing form and function at the nuclear envelope. FEBS Lett 589:2514–2521
Horn HF (2014) LINC complex proteins in development and disease. Curr Top Dev Biol 109:287–321
Crisp M, Liu Q, Roux K et al (2006) Coupling of the nucleus and cytoplasm: role of the LINC complex. J Cell Biol 172:41–53
Starr DA, Han M (2002) Role of ANC-1 in tethering nuclei to the actin cytoskeleton. Science 298:406–409
Malone CJ, Fixsen WD, Horvitz HR et al (1999) UNC-84 localizes to the nuclear envelope and is required for nuclear migration and anchoring during C. elegans development. Dev Camb Engl 126:3171–3181
Kim DI, Birendra KC, Roux KJ (2015) Making the LINC: SUN and KASH protein interactions. Biol Chem 396:295–310
Chang W, Worman HJ, Gundersen GG (2015) Accessorizing and anchoring the LINC complex for multifunctionality. J Cell Biol 208:11–22
Sosa BA, Rothballer A, Kutay U et al (2012) LINC complexes form by binding of three KASH peptides to domain interfaces of trimeric SUN proteins. Cell 149:1035–1047
Zhou Z, Du X, Cai Z et al (2012) Structure of Sad1-UNC84 homology (SUN) domain defines features of molecular bridge in nuclear envelope. J Biol Chem 287:5317–5326
Wang W, Shi Z, Jiao S et al (2012) Structural insights into SUN-KASH complexes across the nuclear envelope. Cell Res 22:1440–1452
Hennen J, Saunders CA, Mueller JD, Luxton GWG (2018) Fluorescence fluctuation spectroscopy reveals differential SUN protein oligomerization in living cells. Mol Biol Cell 29:1003–1011. PMID 29514929
Slaughter BD, Li R (2010) Toward quantitative “in vivo biochemistry” with fluorescence fluctuation spectroscopy. Mol Biol Cell 21:4306–4311
Hennen J, Hur K-H, Saunders CA et al Quantitative brightness analysis of protein oligomerization in the nuclear envelope. Biophys J (in press) Biophys J 113:138–147
Chen Y, Wei L-N, Müller JD (2003) Probing protein oligomerization in living cells with fluorescence fluctuation spectroscopy. Proc Natl Acad Sci U S A 100:15492–15497
Sanchez-Andres A, Chen Y, Müller JD (2005) Molecular brightness determined from a generalized form of Mandel’s Q-parameter. Biophys J 89:3531–3547
Macdonald PJ, Chen Y, Wang X et al (2010) Brightness analysis by Z-scan fluorescence fluctuation spectroscopy for the study of protein interactions within living cells. Biophys J 99:979–988
Chen Y, Müller JD (2007) Determining the stoichiometry of protein heterocomplexes in living cells with fluorescence fluctuation spectroscopy. Proc Natl Acad Sci U S A 104:3147–3152
Saunders CA, Harris NJ, Willey PT et al (2017) TorsinA controls TAN line assembly and the retrograde flow of dorsal perinuclear actin cables during rearward nuclear movement. J Cell Biol 216:657–674
Smith EM, Hennen J, Chen Y et al (2015) Z-scan fluorescence profile deconvolution of cytosolic and membrane-associated protein populations. Anal Biochem 480:11–20
Luxton GWG, Gomes ER, Folker ES et al (2010) Linear arrays of nuclear envelope proteins harness retrograde actin flow for nuclear movement. Science 329:956–959
Ostlund C, Folker ES, Choi JC et al (2009) Dynamics and molecular interactions of linker of nucleoskeleton and cytoskeleton (LINC) complex proteins. J Cell Sci 122:4099–4108
Denk W, Strickler JH, Webb WW (1990) Two-photon laser scanning fluorescence microscopy. Science 248:73–76
Squirrell JM, Wokosin DL, White JG et al (1999) Long-term two-photon fluorescence imaging of mammalian embryos without compromising viability. Nat Biotechnol 17:763–767
Guild JB, Xu C, Webb WW (1997) Measurement of group delay dispersion of high numerical aperture objective lenses using two-photon excited fluorescence. Appl Opt 36:397–401
Gibson SF, Lanni F (1992) Experimental test of an analytical model of aberration in an oil-immersion objective lens used in three-dimensional light microscopy. J Opt Soc Am A 9:154–166
Nasse MJ, Woehl JC (2010) Realistic modeling of the illumination point spread function in confocal scanning optical microscopy. J Opt Soc Am A Opt Image Sci Vis 27:295–302
Patterson GH, Piston DW (2000) Photobleaching in two-photon excitation microscopy. Biophys J 78:2159–2162
Delon A, Usson Y, Derouard J et al (2004) Photobleaching, mobility, and compartmentalisation: inferences in fluorescence correlation spectroscopy. J Fluoresc 14:255–267
Berland K, Shen G (2003) Excitation saturation in two-photon fluorescence correlation spectroscopy. Appl Opt 42:5566–5576
Hur K-H, Macdonald PJ, Berk S et al (2014) Quantitative measurement of brightness from living cells in the presence of photodepletion. PLoS One 9:e97440
Acknowledgments
This work was financially supported in part by the NIH (J.D.M. (GM064589), and C.A.S. (AR007612)), and the Dystonia Medical Research Foundation (G.W.G.L. and J.D.M.).
Author information
Authors and Affiliations
Corresponding authors
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2018 Springer Science+Business Media, LLC, part of Springer Nature
About this protocol
Cite this protocol
Hennen, J., Angert, I., Hur, KH., Gant Luxton, G.W., Mueller, J.D. (2018). Investigating LINC Complex Protein Homo-oligomerization in the Nuclear Envelopes of Living Cells Using Fluorescence Fluctuation Spectroscopy. In: Gundersen, G., Worman, H. (eds) The LINC Complex. Methods in Molecular Biology, vol 1840. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-8691-0_11
Download citation
DOI: https://doi.org/10.1007/978-1-4939-8691-0_11
Published:
Publisher Name: Humana Press, New York, NY
Print ISBN: 978-1-4939-8690-3
Online ISBN: 978-1-4939-8691-0
eBook Packages: Springer Protocols