Skip to main content

Construction of Human Naïve Antibody Gene Libraries

  • Protocol
  • First Online:

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1827))

Abstract

Size and variability often represent an obstacle in generating an effective antibody gene library for the detection of an abundant repertoire of antigens. Therefore, optimizing the construction of a large library is essential for the selection of high-affinity reactive fragments. Here, we report a highly efficient method for the construction of a human naïve antibody gene library for the selection of antibodies as single-chain variable fragments. This protocol is based on many different sets of oligonucleotide primers and multistep electroporation and ligation reactions.

This advanced method can be adopted by any molecular biology laboratory to generate a naïve library for use in isolating single-chain fragment variables against specific targets.

This is a preview of subscription content, log in via an institution.

Buying options

Protocol
USD   49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD   279.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Springer Nature is developing a new tool to find and evaluate Protocols. Learn more

References

  1. Hust M, Frenzel A, Meyer T, Schirrmann T, Dubel S (2012) Construction of human naive antibody gene libraries. Methods Mol Biol 907:85–107. https://doi.org/10.1007/978-1-61779-974-7_5

    Article  PubMed  CAS  Google Scholar 

  2. Pini A, Viti F, Santucci A, Carnemolla B, Zardi L, Neri P, Neri D (1998) Design and use of a phage display library. Human antibodies with subnanomolar affinity against a marker of angiogenesis eluted from a two-dimensional gel. J Biol Chem 273(34):21769–21776

    Article  CAS  PubMed  Google Scholar 

  3. Silacci M, Brack S, Schirru G, Marlind J, Ettorre A, Merlo A, Viti F, Neri D (2005) Design, construction, and characterization of a large synthetic human antibody phage display library. Proteomics 5(9):2340–2350. https://doi.org/10.1002/pmic.200401273

    Article  PubMed  CAS  Google Scholar 

  4. Frenzel A, Kugler J, Wilke S, Schirrmann T, Hust M (2014) Construction of human antibody gene libraries and selection of antibodies by phage display. Methods Mol Biol 1060:215–243. https://doi.org/10.1007/978-1-62703-586-6_12

    Article  PubMed  CAS  Google Scholar 

  5. Weber M, Bujak E, Putelli A, Villa A, Matasci M, Gualandi L, Hemmerle T, Wulhfard S, Neri D (2014) A highly functional synthetic phage display library containing over 40 billion human antibody clones. PLoS One 9(6):e100000. https://doi.org/10.1371/journal.pone.0100000

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  6. Pasello M, Zamboni S, Mallano A, Flego M, Picci P, Cianfriglia M, Scotlandi K (2016) Design and construction of a new human naive single-chain fragment variable antibody library, IORISS1. J Biotechnol 224:1–11. https://doi.org/10.1016/j.jbiotec.2016.02.034

    Article  PubMed  CAS  Google Scholar 

  7. Kim SJ, Jang MH, Stapleton JT, Yoon SO, Kim KS, Jeon ES, Hong HJ (2004) Neutralizing human monoclonal antibodies to hepatitis A virus recovered by phage display. Virology 318(2):598–607. https://doi.org/10.1016/j.virol.2003.10.014

    Article  PubMed  CAS  Google Scholar 

  8. Ayat H, Burrone OR, Sadghizadeh M, Jahanzad E, Rastgou N, Moghadasi S, Arbabi M (2013) Isolation of scFv antibody fragments against HER2 and CEA tumor antigens from combinatorial antibody libraries derived from cancer patients. Biologicals 41(6):345–354. https://doi.org/10.1016/j.biologicals.2013.05.004

    Article  PubMed  CAS  Google Scholar 

  9. Pelat T, Hust M, Thullier P (2009) Obtention and engineering of non-human primate (NHP) antibodies for therapeutics. Mini Rev Med Chem 9(14):1633–1638

    Article  CAS  PubMed  Google Scholar 

  10. Marks JD, Hoogenboom HR, Bonnert TP, McCafferty J, Griffiths AD, Winter G (1991) By-passing immunization. Human antibodies from V-gene libraries displayed on phage. J Mol Biol 222(3):581–597

    Article  CAS  PubMed  Google Scholar 

  11. Vaughan TJ, Williams AJ, Pritchard K, Osbourn JK, Pope AR, Earnshaw JC, McCafferty J, Hodits RA, Wilton J, Johnson KS (1996) Human antibodies with sub-nanomolar affinities isolated from a large non-immunized phage display library. Nat Biotechnol 14(3):309–314. https://doi.org/10.1038/nbt0396-309

    Article  PubMed  CAS  Google Scholar 

  12. de Haard HJ, van Neer N, Reurs A, Hufton SE, Roovers RC, Henderikx P, de Bruine AP, Arends JW, Hoogenboom HR (1999) A large non-immunized human Fab fragment phage library that permits rapid isolation and kinetic analysis of high affinity antibodies. J Biol Chem 274(26):18218–18230

    Article  PubMed  Google Scholar 

  13. Griffiths AD, Malmqvist M, Marks JD, Bye JM, Embleton MJ, McCafferty J, Baier M, Holliger KP, Gorick BD, Hughes-Jones NC et al (1993) Human anti-self antibodies with high specificity from phage display libraries. EMBO J 12(2):725–734

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  14. Hoogenboom HR (2002) Overview of antibody phage-display technology and its applications. Methods Mol Biol 178:1–37

    PubMed  CAS  Google Scholar 

  15. Sblattero D, Bradbury A (1998) A definitive set of oligonucleotide primers for amplifying human V regions. Immunotechnology 3(4):271–278

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgment

This work was supported by the Italian Association for Cancer Research (IG2016_18451 to KS) and by a grant from the Regione Emilia Romagna Project: POR-FESR2007-2013 (PR WEB IOR 1654/2010).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Michela Pasello .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2018 Springer Science+Business Media, LLC, part of Springer Nature

About this protocol

Check for updates. Verify currency and authenticity via CrossMark

Cite this protocol

Pasello, M., Mallano, A., Flego, M., Zamboni, S., Giudice, A.M., Scotlandi, K. (2018). Construction of Human Naïve Antibody Gene Libraries. In: Nevoltris, D., Chames, P. (eds) Antibody Engineering. Methods in Molecular Biology, vol 1827. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-8648-4_4

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-8648-4_4

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-8647-7

  • Online ISBN: 978-1-4939-8648-4

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics