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A Survey of Web-Based Chemogenomic Data Resources

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Computational Chemogenomics

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1825))

Abstract

Chemogenomics is a comparatively nascent branch dealing with the effects of drugs and chemicals on molecular level systems. With the emergence of this new epoch, the quantity of data sources is also unprecedentedly increasing. Despite having a plethora of a databases, the variation in bioactivity measurement as well as bias toward specific protein studies, varied computational procedures and redundant information make data mining tedious, especially for newcomers in the field. In this chapter, we give an overview of hands-on data collection and domains of applicability from some useful Web-based chemogenomic resources that are accessible with nothing more than a Web browser. This overview can help assist users in acquiring chemogenomic datasets for their project at hand.

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Author notes

  1. Rasel Al Mahmud, Rifat Ara Najnin, and Ahsan Habib Polash contributed equally to the chapter.

Authors and Affiliations

  1. Department of Radiation Genetics, Graduate School of Medicine, Kyoto University, Kyoto, Japan

    Rasel Al Mahmud, Rifat Ara Najnin & Ahsan Habib Polash

Authors
  1. Rasel Al Mahmud
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  2. Rifat Ara Najnin
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  3. Ahsan Habib Polash
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Corresponding author

Correspondence to Rifat Ara Najnin .

Editor information

Editors and Affiliations

  1. Life Science Informatics Research Unit, Laboratory of Molecular Biosciences, Kyoto University Graduate School of Medicine, Kyoto, Japan

    J.B. Brown

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Al Mahmud, R., Najnin, R.A., Polash, A.H. (2018). A Survey of Web-Based Chemogenomic Data Resources. In: Brown, J. (eds) Computational Chemogenomics. Methods in Molecular Biology, vol 1825. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-8639-2_1

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  • DOI: https://doi.org/10.1007/978-1-4939-8639-2_1

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  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-8638-5

  • Online ISBN: 978-1-4939-8639-2

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