A Survey of Web-Based Chemogenomic Data Resources

  • Rasel Al Mahmud
  • Rifat Ara NajninEmail author
  • Ahsan Habib Polash
Part of the Methods in Molecular Biology book series (MIMB, volume 1825)


Chemogenomics is a comparatively nascent branch dealing with the effects of drugs and chemicals on molecular level systems. With the emergence of this new epoch, the quantity of data sources is also unprecedentedly increasing. Despite having a plethora of a databases, the variation in bioactivity measurement as well as bias toward specific protein studies, varied computational procedures and redundant information make data mining tedious, especially for newcomers in the field. In this chapter, we give an overview of hands-on data collection and domains of applicability from some useful Web-based chemogenomic resources that are accessible with nothing more than a Web browser. This overview can help assist users in acquiring chemogenomic datasets for their project at hand.

Key words

Chemogenomic resources World Wide Web Ligand-target data ChemProt STITCH PubChem ChEMBL ChEBI ChemSpider PharmGKB 


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Copyright information

© Springer Science+Business Media, LLC, part of Springer Nature 2018

Authors and Affiliations

  • Rasel Al Mahmud
    • 1
  • Rifat Ara Najnin
    • 1
    Email author
  • Ahsan Habib Polash
    • 1
  1. 1.Department of Radiation Genetics, Graduate School of MedicineKyoto UniversityKyotoJapan

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