Abstract
Molecular motors move processively along cytoskeletal filaments through stepping of their catalytic head domains. Observation of the stepping movement of the heads reveals the mechanism of motor processivity and how they coordinate the cycles of the catalytic heads during processive motility. This chapter will discuss recent developments in simultaneous observation of the stepping motions of the two heads using multicolor single particle tracking microscopy.
Techniques Presented: FIONA, multicolor tracking/image registration.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Yildiz A, Tomishige M, Vale RD, Selvin PR (2004) Kinesin walks hand-over-hand. Science 303:676–678
Thompson RE, Larson DR, Webb WW (2002) Precise nanometer localization analysis for individual fluorescent probes. Biophys J 82:2775–2783
Churchman LS, Okten Z, Rock RS, Dawson JF, Spudich JA (2005) Single molecule high-resolution colocalization of Cy3 and Cy5 attached to macromolecules measures intramolecular distances through time. Proc Natl Acad Sci U S A 102:1419–1423
Warshaw DM, Kennedy GG, Work SS, Krementsova EB, Beck S, Trybus KM (2005) Differential labeling of myosin V heads with quantum dots allows direct visualization of hand-over-hand processivity. Biophys J 88:L30–L32
Nishikawa S, Arimoto I, Ikezaki K, Sugawa M, Ueno H, Komori T, Iwane AH, Yanagida T (2010) Switch between large hand-over-hand and small inchworm-like steps in Myosin VI. Cell 142:879–888
DeWitt MA, Chang AY, Combs PA, Yildiz A (2012) Cytoplasmic dynein moves through uncoordinated stepping of the AAA+ ring domains. Science 335:221–225
Cleary FB, Dewitt MA, Bilyard T, Htet ZM, Belyy V, Chan DD, Chang AY, Yildiz A (2014) Tension on the linker gates the ATP-dependent release of dynein from microtubules. Nat Commun 5:4587
Qiu W, Derr ND, Goodman BS, Villa E, Wu D, Shih W, Reck-Peterson SL (2012) Dynein achieves processive motion using both stochastic and coordinated stepping. Nat Struct Mol Biol 19:193–200
Can S, Dewitt MA, Yildiz A (2014) Bidirectional helical motility of cytoplasmic dynein around microtubules. elife 3:e03205. https://doi.org/10.7554/eLife.03205
Gibbons IR, Fronk E (1979) A latent adenosine triphosphatase form of dynein 1 from sea urchin sperm flagella. J Biol Chem 254:187–196
Castoldi M, Popov AV (2003) Purification of brain tubulin through two cycles of polymerization- depolymerization in a high-molarity buffer. Protein Expr Purif 32:83–88
MoberlyChan WJ, Adams DP, Aziz MJ, Hobler G, Schenkel T (2007) Fundamentals of focused ion beam nanostructural processing: below, at, and above the surface. MRS Bull 32:424–432
Kalafut B, Visscher K (2008) An objective, model-independent method for detection of non-uniform steps in noisy signals. Comput Phys Commun 179:716–723
Yu I, Garnham CP, Roll-Mecak A (2015) Writing and reading the tubulin code. J Biol Chem 290:17163–17172
Acknowledgments
This work was supported by a grant from the NIH (GM094522) and the NSF (MCB-1617028) to AY.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2018 Springer Science+Business Media, LLC, part of Springer Nature
About this protocol
Cite this protocol
Wichner, S.M., Yildiz, A. (2018). Multicolor Tracking of Molecular Motors at Nanometer Resolution. In: Lavelle, C. (eds) Molecular Motors. Methods in Molecular Biology, vol 1805. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-8556-2_8
Download citation
DOI: https://doi.org/10.1007/978-1-4939-8556-2_8
Published:
Publisher Name: Humana Press, New York, NY
Print ISBN: 978-1-4939-8554-8
Online ISBN: 978-1-4939-8556-2
eBook Packages: Springer Protocols