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Isolation and Identification of Innate Lymphoid Cells (ILCs) for Immunotoxicity Testing

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Immunotoxicity Testing

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1803))

Abstract

Innate lymphoid cells (ILCs) comprise a family of innate immune cells that orchestrate mucosal immune responses: initiating, sustaining, and even curbing immune responses. ILCs are relatively rare (≤1% of lymphocytes in mucosal tissues), lack classical cell-surface markers, and can be divided into three subsets (type 1-3 ILCs) based on differences in cytokine production, phenotype, and developmental pathway. Because ILCs can only be identified by combinations of cell-surface markers and cytokine production, multicolor flow cytometry is the most reliable method to purify, characterize, and assess the functionality of ILCs. Here, we describe the methods for cell preparation, flow cytometric analysis, and purification of murine ILCs from the lung.

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References

  1. Yazdani R, Sharifi M, Shirvan AS, Azizi G, Ganjalikhani-Hakemi M (2015) Characteristics of innate lymphoid cells (ILCs) and their role in immunological disorders (an update). Cell Immunol 298(1–2):66–76. https://doi.org/10.1016/j.cellimm.2015.09.006

    Article  PubMed  CAS  Google Scholar 

  2. Walker JA, Barlow JL, McKenzie AN (2013) Innate lymphoid cells: how did we miss them? Nat Rev Immunol 13(2):75–87. https://doi.org/10.1038/nri3349

    Article  CAS  PubMed  Google Scholar 

  3. Spits H, Di Santo JP (2011) The expanding family of innate lymphoid cells: regulators and effectors of immunity and tissue remodeling. Nat Immunol 12(1):21–27. https://doi.org/10.1038/ni.1962

    Article  PubMed  CAS  Google Scholar 

  4. Mackay LK, Kallies A (2017) Transcriptional regulation of tissue-resident lymphocytes. Trends Immunol 38(2):94–103. https://doi.org/10.1016/j.it.2016.11.004

    Article  PubMed  CAS  Google Scholar 

  5. Tait Wojno ED, Artis D (2016) Emerging concepts and future challenges in innate lymphoid cell biology. J Exp Med 213(11):2229–2248. https://doi.org/10.1084/jem.20160525

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  6. Klose CS, Artis D (2016) Innate lymphoid cells as regulators of immunity, inflammation and tissue homeostasis. Nat Immunol 17(7):765–774. https://doi.org/10.1038/ni.3489

    Article  PubMed  CAS  Google Scholar 

  7. Gasteiger G, Fan X, Dikiy S, Lee SY, Rudensky AY (2015) Tissue residency of innate lymphoid cells in lymphoid and nonlymphoid organs. Science 350(6263):981–985. https://doi.org/10.1126/science.aac9593

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  8. Constantinides MG, McDonald BD, Verhoef PA, Bendelac A (2014) A committed precursor to innate lymphoid cells. Nature 508(7496):397–401. https://doi.org/10.1038/nature13047

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  9. Spits H, Cupedo T (2012) Innate lymphoid cells: emerging insights in development, lineage relationships, and function. Annu Rev Immunol 30:647–675. https://doi.org/10.1146/annurev-immunol-020711-075053

    Article  PubMed  CAS  Google Scholar 

  10. Spits H, Di Santo JP (2011) The expanding family of innate lymphoid cells: regulators and effectors of immunity and tissue remodeling. Nat Immunol 12(1):21–27. https://doi.org/10.1038/ni.1962

    Article  PubMed  CAS  Google Scholar 

  11. Kim HY, Lee HJ, Chang YJ, Pichavant M, Shore SA, Fitzgerald KA, Iwakura Y, Israel E, Bolger K, Faul J, DeKruyff RH, Umetsu DT (2014) Interleukin-17-producing innate lymphoid cells and the NLRP3 inflammasome facilitate obesity-associated airway hyperreactivity. Nat Med 20(1):54–61. https://doi.org/10.1038/nm.3423

    Article  PubMed  CAS  Google Scholar 

  12. Marashian S, Mortaz E, Jamaati H, Alavi-Moghaddam M, Kiani A, Abedini A, Garssen J, Adcock IM, Velayati A (2015) Role of innate lymphoid cells in lung disease. Iran J Allergy Asthma Immunol 14(4):346–360

    PubMed  Google Scholar 

  13. Lai DM, Shu Q, Fan J (2016) The origin and role of innate lymphoid cells in the lung. Mil Med Res 3:25. https://doi.org/10.1186/s40779-016-0093-2

    Article  PubMed  PubMed Central  Google Scholar 

  14. Withers DR (2016) Innate lymphoid cell regulation of adaptive immunity. Immunology 149(2):123–130. https://doi.org/10.1111/imm.12639

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  15. Woo Y, Jeong D, Chung DH, Kim HY (2014) The roles of innate lymphoid cells in the development of asthma. Immune Netw 14(4):171–181. https://doi.org/10.4110/in.2014.14.4.171

    Article  PubMed  PubMed Central  Google Scholar 

  16. Taube C, Tertilt C, Gyulveszi G, Dehzad N, Kreymborg K, Schneeweiss K, Michel E, Reuter S, Renauld JC, Arnold-Schild D, Schild H, Buhl R, Becher B (2011) IL-22 is produced by innate lymphoid cells and limits inflammation in allergic airway disease. PLoS One 6(7):e21799. https://doi.org/10.1371/journal.pone.0021799

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  17. Zenewicz LA, Flavell RA (2011) Recent advances in IL-22 biology. Int Immunol 23(3):159–163. https://doi.org/10.1093/intimm/dxr001

    Article  PubMed  CAS  Google Scholar 

  18. Hwang YY, McKenzie AN (2013) Innate lymphoid cells in immunity and disease. Adv Exp Med Biol 785:9–26. https://doi.org/10.1007/978-1-4614-6217-0_2

    Article  PubMed  CAS  Google Scholar 

  19. Huntington ND, Carpentier S, Vivier E, Belz GT (2016) Innate lymphoid cells: parallel checkpoints and coordinate interactions with T cells. Curr Opin Immunol 38:86–93. https://doi.org/10.1016/j.coi.2015.11.008

    Article  PubMed  CAS  Google Scholar 

  20. Mjosberg J, Bernink J, Peters C, Spits H (2012) Transcriptional control of innate lymphoid cells. Eur J Immunol 42(8):1916–1923. https://doi.org/10.1002/eji.201242639

    Article  PubMed  CAS  Google Scholar 

  21. Saenz SA, Noti M, Artis D (2010) Innate immune cell populations function as initiators and effectors in Th2 cytokine responses. Trends Immunol 31(11):407–413. https://doi.org/10.1016/j.it.2010.09.001

    Article  PubMed  CAS  Google Scholar 

  22. Diefenbach A, Colonna M, Koyasu S (2014) Development, differentiation, and diversity of innate lymphoid cells. Immunity 41(3):354–365. https://doi.org/10.1016/j.immuni.2014.09.005

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  23. Cortez VS, Robinette ML, Colonna M (2015) Innate lymphoid cells: new insights into function and development. Curr Opin Immunol 32:71–77. https://doi.org/10.1016/j.coi.2015.01.004

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  24. Spits H, Artis D, Colonna M, Diefenbach A, Di Santo JP, Eberl G, Koyasu S, Locksley RM, McKenzie AN, Mebius RE, Powrie F, Vivier E (2013) Innate lymphoid cells: a proposal for uniform nomenclature. Nat Rev Immunol 13(2):145–149. https://doi.org/10.1038/nri3365

    Article  CAS  PubMed  Google Scholar 

  25. McKenzie AN, Spits H, Eberl G (2014) Innate lymphoid cells in inflammation and immunity. Immunity 41(3):366–374. https://doi.org/10.1016/j.immuni.2014.09.006

    Article  PubMed  CAS  Google Scholar 

  26. Licona-Limon P, Kim LK, Palm NW, Flavell RA (2013) TH2, allergy and group 2 innate lymphoid cells. Nat Immunol 14(6):536–542. https://doi.org/10.1038/ni.2617

    Article  PubMed  CAS  Google Scholar 

  27. Melo-Gonzalez F, Hepworth MR (2017) Functional and phenotypic heterogeneity of group 3 innate lymphoid cells. Immunology 150(3):265–275. https://doi.org/10.1111/imm.12697

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  28. Artis D, Spits H (2015) The biology of innate lymphoid cells. Nature 517(7534):293–301. https://doi.org/10.1038/nature14189

    Article  PubMed  CAS  Google Scholar 

  29. Kim CH, Hashimoto-Hill S, Kim M (2016) Migration and tissue tropism of innate lymphoid cells. Trends Immunol 37(1):68–79. https://doi.org/10.1016/j.it.2015.11.003

    Article  PubMed  CAS  Google Scholar 

  30. Cheng H, Jin C, Wu J, Zhu S, Liu YJ, Chen J (2017) Guards at the gate: physiological and pathological roles of tissue-resident innate lymphoid cells in the lung. Protein Cell 8(12):878–895. https://doi.org/10.1007/s13238-017-0379-5

    Article  PubMed  PubMed Central  Google Scholar 

  31. Dumoutier L, de Heusch M, Orabona C, Satoh-Takayama N, Eberl G, Sirard JC, Di Santo JP, Renauld JC (2011) IL-22 is produced by gammaC-independent CD25+ CCR6+ innate murine spleen cells upon inflammatory stimuli and contributes to LPS-induced lethality. Eur J Immunol 41(4):1075–1085. https://doi.org/10.1002/eji.201040878

    Article  PubMed  CAS  Google Scholar 

  32. Eberl G (2012) Development and evolution of RORgammat+ cells in a microbe’s world. Immunol Rev 245(1):177–188. https://doi.org/10.1111/j.1600-065X.2011.01071.x

    Article  PubMed  CAS  Google Scholar 

  33. Wojno ED, Monticelli LA, Tran SV, Alenghat T, Osborne LC, Thome JJ, Willis C, Budelsky A, Farber DL, Artis D (2015) The prostaglandin D(2) receptor CRTH2 regulates accumulation of group 2 innate lymphoid cells in the inflamed lung. Mucosal Immunol 8(6):1313–1323. https://doi.org/10.1038/mi.2015.21

    Article  PubMed  CAS  Google Scholar 

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Correspondence to Celine A. Beamer .

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Tait Wojno, E.D., Beamer, C.A. (2018). Isolation and Identification of Innate Lymphoid Cells (ILCs) for Immunotoxicity Testing. In: DeWitt, J., Rockwell, C., Bowman, C. (eds) Immunotoxicity Testing. Methods in Molecular Biology, vol 1803. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-8549-4_21

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  • DOI: https://doi.org/10.1007/978-1-4939-8549-4_21

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  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-8548-7

  • Online ISBN: 978-1-4939-8549-4

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