Skip to main content

Modification of Protein Scaffolds via Copper-Catalyzed Azide–Alkyne Cycloaddition

  • Protocol
  • First Online:
Protein Scaffolds

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1798))

Abstract

The copper-catalyzed azide–alkyne cycloaddition (CuAAC) has proven to be a reliable, high-efficiency method for modification of protein scaffolds. This “click” reaction offers specificity and nearly quantitative yields even at low reagent concentrations. While robust, CuAAC still requires proper setup to achieve the high efficiency characteristic of this reaction, as well as to avoid degradation of sensitive substrates. Detailed herein is a generic CuAAC protocol for protein modification. Key features include the use of DMSO and triazole-based accelerating ligands for protection against reactive oxygen species, as well as aminoguanidine for intercepting deleterious ascorbate by-products formed during the bioconjugation.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Tornøe CW, Christensen C, Meldal M (2002) Peptidotriazoles on solid phase: [1,2,3]-triazoles by regiospecific copper(I)-catalyzed 1,3-dipolar cycloadditions of terminal alkynes to azides. J Org Chem 67:3057–3064

    Article  CAS  PubMed  Google Scholar 

  2. Rostovtsev VV, Green LG, Fokin VV et al (2002) A stepwise Huisgen cycloaddition process: copper(I)-catalyzed regioselective ligation of azides and terminal alkynes. Angew Chem Int Ed 41:2596–2599

    Article  CAS  Google Scholar 

  3. Kolb HC, Finn MG, Sharpless KB (2001) Click chemistry: diverse chemical function from a few good reactions. Angew Chem Int Ed 40:2004–2021

    Article  CAS  Google Scholar 

  4. Meldal M, Tornøe CW (2008) Cu-catalyzed azide–alkyne cycloaddition. Chem Rev 108:2952–3015

    Article  CAS  PubMed  Google Scholar 

  5. McKay CS, Finn MG (2014) Click chemistry in complex mixtures: bioorthogonal bioconjugation. Chem Bio 21:1075–1101

    Article  CAS  Google Scholar 

  6. Haldón E, Nicasio MC, Pérez PJ (2015) Copper-catalysed azide–alkyne cycloadditions (CuAAC): an update. Org Biomol Chem 13:9528–9550

    Article  CAS  PubMed  Google Scholar 

  7. Presolski SI, Hong V, Cho S-H et al (2010) Tailored ligand acceleration of the Cu-catalyzed azide–alkyne cycloaddition reaction: practical and mechanistic implications. J Am Chem Soc 132:14570–14576

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  8. Worrell BT, Malik JA, Fokin VV (2013) Direct evidence of a dinuclear copper intermediate in Cu(I)-catalyzed azide–alkyne cycloadditions. Science 340:457–460

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  9. Jin L, Tolentino DR, Melaimi M et al (2015) Isolation of bis(copper) key intermediates in Cu-catalyzed azide–alkyne “click reaction”. Sci Adv 1:e1500304

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  10. Hong V, Presolski SI, Ma C et al (2009) Analysis and optimization of copper-catalyzed azide–alkyne cycloaddition for bioconjugation. Angew Chem Int Ed 48:9879–9883

    Article  CAS  Google Scholar 

  11. Presolski SI, Hong VP, Finn MG (2011) Copper-catalyzed azide–alkyne click chemistry for bioconjugation. Curr Protoc Chem Biol 3:153–162

    PubMed  PubMed Central  Google Scholar 

  12. Abel GR Jr, Calabrese ZA, Ayco J et al (2016) Measuring and suppressing the oxidative damage to DNA during Cu(I)-catalyzed azide−alkyne cycloaddition. Bioconj Chem 27:698–704

    Article  CAS  Google Scholar 

  13. Hong V, Steinmetz NF, Manchester M et al (2010) Labeling Live cells by copper-catalyzed alkyne–azide click chemistry. Bioconj Chem 21:1912–1916

    Article  CAS  Google Scholar 

  14. Uttamapinant C, Tangpeerachaikul A, Grecian S et al (2012) Fast, cell-compatible click chemistry with copper-chelating azides for biomolecular labeling. Angew Chem Int Ed 51:5852–5856

    Article  CAS  Google Scholar 

  15. Sivakumar K, Xie F, Cash BM et al (2004) A fluorogenic 1,3-dipolar cycloaddition reaction of 3-azidocoumarins and acetylenes. Org Lett 6:4603–4606

    Article  CAS  PubMed  Google Scholar 

  16. Kislukhin AA, Hong VP, Breitenkamp KE et al (2013) Relative performance of alkynes in copper-catalyzed azide−alkyne cycloaddition. Bioconj Chem 24:684–689

    Article  CAS  Google Scholar 

Download references

Acknowledgments

The author would like to acknowledge Dr. Vu P. Hong, Dr. Alexander Kislukhin, and Prof. M.G. Finn for many fruitful discussions on the mechanism and the optimization of the ligand-accelerated CuAAC reaction, as well as Yale-NUS start-up grant for funding.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Stanislav Presolski .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2018 Springer Science+Business Media, LLC, part of Springer Nature

About this protocol

Check for updates. Verify currency and authenticity via CrossMark

Cite this protocol

Presolski, S. (2018). Modification of Protein Scaffolds via Copper-Catalyzed Azide–Alkyne Cycloaddition. In: Udit, A. (eds) Protein Scaffolds. Methods in Molecular Biology, vol 1798. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-7893-9_14

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-7893-9_14

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-7892-2

  • Online ISBN: 978-1-4939-7893-9

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics