Abstract
Telomere restriction fragment, 3D quantitative FISH on nuclei, and quantitative FISH on metaphases are complementary approaches that explore telomere dysfunction genomically, cellularly, and chromosomally, respectively. We used these approaches to study association between telomere dysfunction and degree of genomic instability related to TP53 mutations in LoVo isogenic cell lines. We found a strong correlation between degree of genomic instability, telomere dysfunction, and specific mutations of TP53. The use of complementary approaches to study telomere biology is essential to have a comprehensive understanding of telomere involvement in genomic instability.
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Benetti R, Garcia-Cao M, Blasco MA (2007) Telomere length regulates the epigenetic status of mammalian telomeres and subtelomeres. Nat Genet 39:243–250. https://doi.org/10.1038/ng1952
Moyzis RK, Buckingham JM, Cram LS et al (1988) A highly conserved repetitive DNA sequence, (TTAGGG)n, present at the telomeres of human chromosomes. Proc Natl Acad Sci U S A 85:6622–6626
Chong L, van Steensel B, Broccoli D et al (1995) A human telomeric protein. Science 270:1663–1667
De Lange T, Shiue L, Myers RM et al (1990) Structure and variability of human chromosome ends. Mol Cell Biol 10:518–527
Blasco MA, Lee HW, Hande MP et al (1997) Telomere shortening and tumor formation by mouse cells lacking telomerase RNA. Cell 91:25–34
Chuang TCY, Moshir S, Garini Y et al (2004) The three-dimensional organization of telomeres in the nucleus of mammalian cells. BMC Biol 2:12. https://doi.org/10.1186/1741-7007-2-12
Mai S, Garini Y (2005) Oncogenic remodeling of the three-dimensional organization of the interphase nucleus: c-Myc induces telomeric aggregates whose formation precedes chromosomal rearrangements. Cell Cycle 4:1327–1331
Louis SF, Vermolen BJ, Garini Y et al (2005) c-Myc induces chromosomal rearrangements through telomere and chromosome remodeling in the interphase nucleus. Proc Natl Acad Sci U S A 102:9613–9618. https://doi.org/10.1073/pnas.0407512102
Hande MP, Samper E, Lansdorp P et al (1999) Telomere length dynamics and chromosomal instability in cells derived from telomerase null mice. J Cell Biol 144:589–601
Artandi SE, Chang S, Lee SL et al (2000) Telomere dysfunction promotes non-reciprocal translocations and epithelial cancers in mice. Nature 406:641–645. https://doi.org/10.1038/35020592
Mc CB (1939) The behavior in successive nuclear divisions of a chromosome broken at meiosis. Proc Natl Acad Sci U S A 25:405–416
Maciejowski J, de Lange T (2017) Telomeres in cancer: tumour suppression and genome instability. Nat Rev Mol Cell Biol 18:175–186. https://doi.org/10.1038/nrm.2016.171
Yates LR, Campbell PJ (2012) Evolution of the cancer genome. Nat Rev Genet 13:795–806. https://doi.org/10.1038/nrg3317
Davoli T, Denchi EL, de Lange T (2010) Persistent telomere damage induces bypass of mitosis and tetraploidy. Cell 141:81–93. https://doi.org/10.1016/j.cell.2010.01.031
Davoli T, de Lange T (2012) Telomere-driven tetraploidization occurs in human cells undergoing crisis and promotes transformation of mouse cells. Cancer Cell 21:765–776. https://doi.org/10.1016/j.ccr.2012.03.044
Rausch T, Jones DTW, Zapatka M et al (2012) Genome sequencing of pediatric medulloblastoma links catastrophic DNA rearrangements with TP53 mutations. Cell 148:59–71. https://doi.org/10.1016/j.cell.2011.12.013
Samassekou O, Bastien N, Lichtensztejn D et al (2014) Different TP53 mutations are associated with specific chromosomal rearrangements, telomere length changes, and remodeling of the nuclear architecture of telomeres. Genes Chromosomes Cancer 53:934–950. https://doi.org/10.1002/gcc.22205
Vermolen BJ, Garini Y, Mai S et al (2005) Characterizing the three-dimensional organization of telomeres. Cytometry A 67:144–150. https://doi.org/10.1002/cyto.a.20159
Lansdorp PM, Verwoerd NP, van de Rijke FM et al (1996) Heterogeneity in telomere length of human chromosomes. Hum Mol Genet 5:685–691
Londono-Vallejo JA, DerSarkissian H, Cazes L et al (2001) Differences in telomere length between homologous chromosomes in humans. Nucleic Acids Res 29:3164–3171
Samassekou O, Ntwari A, Hebert J et al (2009) Individual telomere lengths in chronic myeloid leukemia. Neoplasia 11:1146–1154
Pocard M, Chevillard S, Villaudy J et al (1996) Different p53 mutations produce distinct effects on the ability of colon carcinoma cells to become blocked at the G1/S boundary after irradiation. Oncogene 12:875–882
Dridi W, Fetni R, Lavoie J et al (2003) The dominant-negative effect of p53 mutants and p21 induction in tetraploid G1 arrest depends on the type of p53 mutation and the nature of the stimulus. Cancer Genet Cytogenet 143:39–49
Masramon L, Ribas M, Cifuentes P et al (2000) Cytogenetic characterization of two colon cell lines by using conventional G-banding, comparative genomic hybridization, and whole chromosome painting. Cancer Genet Cytogenet 121:17–21
Schaefer LH, Schuster D, Herz H (2001) Generalized approach for accelerated maximum likelihood based image restoration applied to three-dimensional fluorescence microscopy. J Microsc 204:99–107
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Samassekou, O., Bastien, N., Yan, J., Mai, S., Drouin, R. (2018). Study of Telomere Dysfunction in TP53 Mutant LoVo Cell Lines as a Model for Genomic Instability. In: Pellestor, F. (eds) Chromothripsis. Methods in Molecular Biology, vol 1769. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-7780-2_14
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DOI: https://doi.org/10.1007/978-1-4939-7780-2_14
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