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Brachypodium Genomics pp 119–137Cite as

Molecular Markers in Whole Genome Evolution of Brachypodium

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Part of the book series: Methods in Molecular Biology ((MIMB,volume 1667))

Abstract

Molecular markers play more and more important role in population genetic and phylogenetic studies; choice of marker systems for a particular study has become a serious problem. These marker systems have different advantages and disadvantages, so it is imperative to keep in mind all the pros and cons of the technique while selecting one for the problem to be addressed.

Here, we concisely introduced three molecular marker techniques, namely SSR, ISSR, and RFLP. We elaborated their properties such as reliability, simplicity, cost-effectiveness, and speed, in addition to data analysis of genetic diversity. We have outlined here the whole methodology of these techniques.

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Author information

Authors and Affiliations

  1. Department of Life Science and Technology, Lijiang Teachers College, Xintuan District, Lijiang City, Yunnan Province, People’s Republic of China

    Xin-Chun Mo & Can Kou

  2. College of Pharmacy and Chemistry, Dali University, Dali, Yunnan, People’s Republic of China

    De-Quan Zhang

  3. National Technical Secondary School of Lijiang, Lijiang, Yunnan, People’s Republic of China

    Ling-Juan Yin

Authors
  1. Xin-Chun Mo
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  2. De-Quan Zhang
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  3. Can Kou
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  4. Ling-Juan Yin
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Corresponding author

Correspondence to Xin-Chun Mo .

Editor information

Editors and Affiliations

  1. Department of Biodiversity and Molecular Ecology, Fondazione Edmund Mach IASMA, Trentino, Italy

    Gaurav Sablok

  2. Sabanci University, Istanbul, Turkey

    Hikmet Budak

  3. Climate Change Cluster (C3), University of Technology Sydney, Sydney, New South Wales, Australia

    Peter J. Ralph

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Mo, XC., Zhang, DQ., Kou, C., Yin, LJ. (2018). Molecular Markers in Whole Genome Evolution of Brachypodium . In: Sablok, G., Budak, H., Ralph, P. (eds) Brachypodium Genomics. Methods in Molecular Biology, vol 1667. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-7278-4_10

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  • DOI: https://doi.org/10.1007/978-1-4939-7278-4_10

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-7276-0

  • Online ISBN: 978-1-4939-7278-4

  • eBook Packages: Springer Protocols

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