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Quantitative RNA Analysis from Urine Using Real Time PCR

  • Lourdes MengualEmail author
  • Mireia Olivan
Protocol
Part of the Methods in Molecular Biology book series (MIMB, volume 1655)

Abstract

Urine is emerging as a biological fluid suitable to perform liquid biopsy in a minimally invasive manner, a fundamental attribute for prevention and early detection of cancer. Urine biomarkers can be analyzed in voided urine, in urine sediment, and urine supernatant. In the case of urothelial carcinoma, in which tumor cells are in direct contact with urine, the assessment of the levels of biomarkers in the urinary cell fraction appears to be the most promising approach to identify diagnostic and prognostic biomarkers in a noninvasive way. Here, we describe a protocol to collect and process urine samples to obtain urinary exfoliated cells. Furthermore, we describe the methodology to isolate RNA from urinary cells and to quantify gene expression levels from these urinary cells.

Key words

cDNA pre-amplification Gene expression Quantitative PCR Reverse transcription RNA Urine 

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Copyright information

© Springer Science+Business Media LLC 2018

Authors and Affiliations

  1. 1.Laboratory and Department of Urology, Centre de Recerca Biomèdica CELLEX, Hospital Clínic, Universitat de BarcelonaIDIBAPSBarcelonaEspaña
  2. 2.Group of Biomedical Research in Urology, Vall d’Hebron Research Institute (VHIR)Universitat Autònoma de Barcelona (UAB)BarcelonaSpain

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