Skip to main content

A Lateral Flow Biosensor for the Detection of Single Nucleotide Polymorphisms

  • Protocol
  • First Online:
Biosensors and Biodetection

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1572))

Abstract

A lateral flow biosensor (LFB) is introduced for the detection of single nucleotide polymorphisms (SNPs). The assay is composed of two steps: circular strand displacement reaction and lateral flow biosensor detection. In step 1, the nucleotide at SNP site is recognized by T4 DNA ligase and the signal is amplified by strand displacement DNA polymerase, which can be accomplished at a constant temperature. In step 2, the reaction product of step 1 is detected by a lateral flow biosensor, which is a rapid and cost effective tool for nuclei acid detection. Comparing with conventional methods, it requires no complicated machines. It is suitable for the use of point of care diagnostics. Therefore, this simple, cost effective, robust, and promising LFB detection method of SNP has great potential for the detection of genetic diseases, personalized medicine, cancer related mutations, and drug-resistant mutations of infectious agents.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 109.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 139.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 249.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Watanabe H, Sawabu N, Songur Y et al (1996) Detection of K-ras point mutations at codon 12 in pure pancreatic juice for the diagnosis of pancreatic cancer by PCR-RFLP analysis. Pancreas 12:18–24

    Article  CAS  Google Scholar 

  2. Gunderson KL, Steemers FJ, Lee G et al (2005) A genome-wide scalable SNP genotyping assay using microarray technology. Nat Genet 37:549–554

    Article  CAS  Google Scholar 

  3. Lindroos K, Sigurdsson S, Johansson K et al (2002) Multiplex SNP genotyping in pooled DNA samples by a four-colour microarray system. Nucleic Acids Res 30:e70

    Article  Google Scholar 

  4. Bernard PS, Lay MJ, Wittwer CT (1998) Integrated amplification and detection of the C677T point mutation in the methylenetetrahydrofolate reductase gene by fluorescence resonance energy transfer and probe melting curves. Anal Biochem 255:101–107

    Article  CAS  Google Scholar 

  5. Wabuyele MB, Farquar H, Stryjewski W et al (2003) Approaching real-time molecular diagnostics: single-pair fluorescence resonance energy transfer (spFRET) detection for the analysis of low abundant point mutations in K-ras oncogenes. J Am Chem Soc 125:6937–6945

    Article  CAS  Google Scholar 

  6. Huang Y, Zhang Y-L, Xu X et al (2009) Highly Specific and Sensitive Electrochemical Genotyping via Gap Ligation Reaction and Surface Hybridization Detection. J Am Chem Soc 131:2478–2480

    Article  CAS  Google Scholar 

  7. Guo Q, Yang X, Wang K et al (2009) Sensitive fluorescence detection of nucleic acids based on isothermal circular strand-displacement polymerization reaction. Nucleic Acids Res 37:e20

    Article  Google Scholar 

  8. Li JH, Chu X, Liu YL et al (2005) A colorimetric method for point mutation detection using high-fidelity DNA ligase. Nucleic Acids Res 33:E168

    Article  Google Scholar 

  9. Hashimoto M, Barany F, Soper SA (2006) Polymerase chain reaction/ligase detection reaction/hybridization assays using flow-through microfluidic devices for the detection of low-abundant DNA point mutations. Biosens Bioelectron 21:1915–1923

    Article  CAS  Google Scholar 

  10. Lie P, Liu J, Fang Z et al (2012) A lateral flow biosensor for detection of nucleic acids with high sensitivity and selectivity. Chem Commun 48:236–238

    Article  CAS  Google Scholar 

  11. Fang Z, Ge C, Zhang W et al (2011) A lateral flow biosensor for rapid detection of DNA-binding protein c-jun. Biosens Bioelectron 27:192–196

    Article  CAS  Google Scholar 

  12. Liu G, Mao X, Phillips JA et al (2009) Aptamer-nanoparticle strip biosensor for sensitive detection of cancer cells. Anal Chem 81:10013–10018

    Article  CAS  Google Scholar 

  13. Fang ZY, Huang J, Lie PC et al (2010) Lateral flow nucleic acid biosensor for Cu2+ detection in aqueous solution with high sensitivity and selectivity. Chem Commun 46:9043–9045

    Article  CAS  Google Scholar 

  14. Breivik J, Meling GI, Spurkland A et al (1994) K-ras mutation in colorectal cancer: relations to patient age, sex and tumour location. Br J Cancer 69:367–371

    Article  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Lingwen Zeng .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2017 Springer Science+Business Media LLC

About this protocol

Cite this protocol

Zeng, L., Xiao, Z. (2017). A Lateral Flow Biosensor for the Detection of Single Nucleotide Polymorphisms. In: Prickril, B., Rasooly, A. (eds) Biosensors and Biodetection. Methods in Molecular Biology, vol 1572. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-6911-1_27

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-6911-1_27

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-6910-4

  • Online ISBN: 978-1-4939-6911-1

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics