Skip to main content

Identifying Sterol Response Elements Within Promoters of Genes

  • Protocol
  • First Online:
Book cover Cholesterol Homeostasis

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1583))

  • 2272 Accesses

Abstract

Cholesterol levels are under tight control within cells. This involves a complex interplay of balancing synthesis, uptake, and export. A major player in the transcriptional regulation of cholesterol levels is sterol regulatory element binding protein (SREBP). SREBP is upregulated in conditions of low cholesterol, and then binds to sterol regulatory elements (SREs) that exist within the promoters of genes involved in cholesterol synthesis and uptake.

Here, we describe a method to identify sterol response elements (SREs) using in silico and experimental approaches.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 119.00
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 159.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Horton JD, Shah NA, Warrington JA, Anderson NN, Park SW, Brown MS, Goldstein JL (2003) Combined analysis of oligonucleotide microarray data from transgenic and knockout mice identifies direct SREBP target genes. Proc Natl Acad Sci 100:12027–12032

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  2. Sharpe LJ, Brown AJ (2013) Controlling cholesterol synthesis beyond 3-hydroxy-3-methylglutaryl-CoA reductase (HMGCR). J Biol Chem 288:18707–18715

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  3. Zerenturk EJ, Sharpe LJ, Brown AJ (2012) Sterols regulate 3beta-hydroxysterol Delta24-reductase (DHCR24) via dual sterol regulatory elements: Cooperative induction of key enzymes in lipid synthesis by Sterol Regulatory Element Binding Proteins. Biochim Biophys Acta 1821:1350–1360

    Article  CAS  PubMed  Google Scholar 

  4. Prabhu AV, Sharpe LJ, Brown AJ (2014) The sterol-based transcriptional control of human 7-dehydrocholesterol reductase (DHCR7): Evidence of a cooperative regulatory program in cholesterol synthesis. Biochim Biophys Acta 1842:1431–1439

    Article  PubMed  Google Scholar 

  5. Kent WJ, Sugnet CW, Furey TS, Roskin KM, Pringle TH, Zahler AM, Haussler D (2002) The human genome browser at UCSC. Genome Res 12:996–1006

    Article  CAS  PubMed  PubMed Central  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Andrew J. Brown Ph.D. .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2017 Springer Science+Business Media LLC

About this protocol

Cite this protocol

Sharpe, L.J., Brown, A.J. (2017). Identifying Sterol Response Elements Within Promoters of Genes. In: Gelissen, I., Brown, A. (eds) Cholesterol Homeostasis. Methods in Molecular Biology, vol 1583. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-6875-6_13

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-6875-6_13

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-6873-2

  • Online ISBN: 978-1-4939-6875-6

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics