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Construction of a scFv Library with Synthetic, Non-combinatorial CDR Diversity

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Synthetic Antibodies

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1575))

Abstract

Many large synthetic antibody libraries have been designed, constructed, and successfully generated high-quality antibodies suitable for various demanding applications. While synthetic antibody libraries have many advantages such as optimized framework sequences and a broader sequence landscape than natural antibodies, their sequence diversities typically are generated by random combinatorial synthetic processes which cause the incorporation of many undesired CDR sequences. Here, we describe the construction of a synthetic scFv library using oligonucleotide mixtures that contain predefined, non-combinatorially synthesized CDR sequences. Each CDR is first inserted to a master scFv framework sequence and the resulting single-CDR libraries are subjected to a round of proofread panning. The proofread CDR sequences are assembled to produce the final scFv library with six diversified CDRs.

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Acknowledgment

This work was supported by the National Research Foundation of Korea (NRF) grant for Medical Bioconvergence Research Center (NRF-2013M3A6A4044991) and the Bio & Medical Technology Development Program of the NRF funded by the Korean government, MSIP (NRF-2015M3A9B6029138) to H.S.

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Correspondence to Hyunbo Shim .

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Bai, X., Shim, H. (2017). Construction of a scFv Library with Synthetic, Non-combinatorial CDR Diversity. In: Tiller, T. (eds) Synthetic Antibodies. Methods in Molecular Biology, vol 1575. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-6857-2_2

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  • DOI: https://doi.org/10.1007/978-1-4939-6857-2_2

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  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-6855-8

  • Online ISBN: 978-1-4939-6857-2

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