Abstract
Lipids draw increasing attention of cell biologists because of the wide variety of functions beyond their role as building blocks of cellular membranes. Mitochondrial membranes possess characteristic lipid compositions that are intimately associated with mitochondrial architecture and activities. Therefore, quantitative assessment of lipids in isolated mitochondria is of importance for mitochondrial research. Here, I describe our workflow for quantitative analysis of glycerophospholipids in mitochondria with a focus on purification of pure mitochondrial fractions from yeast and cultured mammalian cells as well as improved settings for the analysis of cardiolipin by nano-electrospray ionization mass spectrometry.
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References
Ren M, Phoon CK, Schlame M (2014) Metabolism and function of mitochondrial cardiolipin. Prog Lipid Res 55:1–16. doi:10.1016/j.plipres.2014.04.001
Scharwey M, Tatsuta T, Langer T (2013) Mitochondrial lipid transport at a glance. J Cell Sci 126(Pt 23):5317–5323. doi:10.1242/jcs.134130
Horvath SE, Daum G (2013) Lipids of mitochondria. Prog Lipid Res 52(4):590–614. doi:10.1016/j.plipres.2013.07.002
Frohman MA (2015) Role of mitochondrial lipids in guiding fission and fusion. J Mol Med (Berl) 93(3):263–269. doi:10.1007/s00109-014-1237-z
Claypool SM, Koehler CM (2012) The complexity of cardiolipin in health and disease. Trends Biochem Sci 37(1):32–41. doi:10.1016/j.tibs.2011.09.003
Richter-Dennerlein R, Korwitz A, Haag M, Tatsuta T, Dargazanli S, Baker M, Decker T, Lamkemeyer T, Rugarli EI, Langer T (2014) DNAJC19, a mitochondrial cochaperone associated with cardiomyopathy, forms a complex with prohibitins to regulate cardiolipin remodeling. Cell Metab 20(1):158–171. doi:10.1016/j.cmet.2014.04.016
Monteiro JP, Oliveira PJ, Jurado AS (2013) Mitochondrial membrane lipid remodeling in pathophysiology: a new target for diet and therapeutic interventions. Prog Lipid Res 52(4):513–528. doi:10.1016/j.plipres.2013.06.002
Shevchenko A, Simons K (2010) Lipidomics: coming to grips with lipid diversity. Nat Rev Mol Cell Biol 11(8):593–598. doi:10.1038/nrm2934
Wang M, Han X (2014) Multidimensional mass spectrometry-based shotgun lipidomics. Methods Mol Biol 1198:203–220. doi:10.1007/978-1-4939-1258-2_13
Almeida R, Pauling JK, Sokol E, Hannibal-Bach HK, Ejsing CS (2015) Comprehensive lipidome analysis by shotgun lipidomics on a hybrid quadrupole-orbitrap-linear ion trap mass spectrometer. J Am Soc Mass Spectrom 26(1):133–148. doi:10.1007/s13361-014-1013-x
Shevchenko A, Surendranath V, Ejsing CS, Klemm RW, Simons K, Sampaio JL, Ekroos K, Duchoslav E (2009) Global analysis of the yeast lipidome by quantitative shotgun mass spectrometry. Proc Natl Acad Sci U S A 106(7):2136–2141. doi:10.1073/pnas.0811700106
Ozbalci C, Sachsenheimer T, Brügger B (2013) Quantitative analysis of cellular lipids by nano-electrospray ionization mass spectrometry. Methods Mol Biol 1033:3–20. doi:10.1007/978-1-62703-487-6_1
Brügger B (2014) Lipidomics: analysis of the lipid composition of cells and subcellular organelles by electrospray ionization mass spectrometry. Annu Rev Biochem 83:79–98. doi:10.1146/annurev-biochem-060713-035324
Scherer M, Schmitz G, Liebisch G (2010) Simultaneous quantification of cardiolipin, bis(monoacylglycero)phosphate and their precursors by hydrophilic interaction LC-MS/MS including correction of isotopic overlap. Anal Chem 82(21):8794–8799. doi:10.1021/ac1021826
Vance JE (2014) MAM (mitochondria-associated membranes) in mammalian cells: lipids and beyond. Biochim Biophys Acta 1841(4):595–609. doi:10.1016/j.bbalip.2013.11.014
Bligh EG, Dyer WJ (1959) A rapid method of total lipid extraction and purification. Can J Biochem Physiol 37(8):911–917
Gray A, Olsson H, Batty IH, Priganica L, Peter Downes C (2003) Nonradioactive methods for the assay of phosphoinositide 3-kinases and phosphoinositide phosphatases and selective detection of signaling lipids in cell and tissue extracts. Anal Biochem 313(2):234–245
Koivusalo M, Haimi P, Heikinheimo L, Kostiainen R, Somerharju P (2001) Quantitative determination of phospholipid compositions by ESI-MS: effects of acyl chain length, unsaturation, and lipid concentration on instrument response. J Lipid Res 42(4):663–672
Ejsing CS, Duchoslav E, Sampaio J, Simons K, Bonner R, Thiele C, Ekroos K, Shevchenko A (2006) Automated identification and quantification of glycerophospholipid molecular species by multiple precursor ion scanning. Anal Chem 78(17):6202–6214. doi:10.1021/ac060545x
Acknowledgments
I thank Shotaro Saita and Kavia Bakka for providing protocols and example results, Susanne Brodesser and Mari Aaltonen for critical reading of the manuscript, and Thomas Langer for continuous support. I also acknowledge S. B. and Matthias Haag for technical advices in lipidomics. This work is supported by a grant of the Deutsche Forschungsgemeinschaft (TA 1132/2-1).
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Tatsuta, T. (2017). Quantitative Analysis of Glycerophospholipids in Mitochondria by Mass Spectrometry. In: Mokranjac, D., Perocchi, F. (eds) Mitochondria. Methods in Molecular Biology, vol 1567. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-6824-4_7
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DOI: https://doi.org/10.1007/978-1-4939-6824-4_7
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