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Phased Genome Sequencing Through Chromosome Sorting

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Haplotyping

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1551))

Abstract

Phase information of an individual genome provides fundamentally useful genetic information for the understanding of genome function, phenotype, and disease. With the development of new sequencing technology, much interest has been focused on the challenges in obtaining long-range phase information. Here, we present the detailed protocol for a method capable of generating genomic sequences completely phased across the entire chromosome through FACS-mediated chromosome sorting and next generation sequencing, known as Phase-seq.

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Acknowledgment

This work was supported by NIH grant R01HG007834.

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Correspondence to Wing Hung Wong .

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Chen, X., Yang, H., Wong, W.H. (2017). Phased Genome Sequencing Through Chromosome Sorting. In: Tiemann-Boege, I., Betancourt, A. (eds) Haplotyping. Methods in Molecular Biology, vol 1551. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-6750-6_10

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  • DOI: https://doi.org/10.1007/978-1-4939-6750-6_10

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  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-6748-3

  • Online ISBN: 978-1-4939-6750-6

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