Abstract
Multiplex PCR-based methods for simultaneous detection and quantification of different mycotoxin-producing Penicillia are useful tools to be used in food safety programs. These rapid and sensitive techniques allow taking corrective actions during food processing or storage for avoiding accumulation of mycotoxins in them. In this chapter, three multiplex PCR-based methods to detect at least patulin- and ochratoxin A-producing Penicillia are detailed. Two of them are different multiplex real-time PCR suitable for monitoring and quantifying toxigenic Penicillium using the nonspecific dye SYBR Green and specific hydrolysis probes (TaqMan). All of them successfully use the same target genes involved in the biosynthesis of such mycotoxins for designing primers and/or probes.
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Frisvad JC, Smedsgaard J, Larsen TO et al (2004) Mycotoxins, drugs and other extrolites produced by species in Penicillium subgenus Penicillium. Stud Mycol 49:201–241
Lund F, Frisvad JC (2003) Penicillium verrucosum in wheat and barley indicates presence of ochratoxin A. J Appl Microbiol 95:1117–1123
Niessen L (2007) PCR-based diagnosis and quantification of mycotoxin producing fungi. Int J Food Microbiol 119:38–46
Baily JD, Tabuc C, Quérin A et al (2005) Production and stability of patulin, ochratoxin A, citrinin, and cyclopiazonic acid on dry-cured ham. J Food Prot 68:1516–1520
Bogs C, Battilani P, Geisen R (2006) Development of a molecular detection and differentiation system for ochratoxin A producing Penicillium species and its application to analyse the occurrence of Penicilliumnordicum in cured meats. Int J Food Microbiol 107:39–47
Dorner JW (2002) Recent advances in analytical methodology for cyclopiazonic acid. Adv Exp Med Biol 504:107–116
Núñez F, Díaz MC, Rodríguez M et al (2000) Effects of substrate, water activity, and temperature on growth and verrucosidin production by Penicillium polonicum isolated from dry-cured ham. J Food Prot 63:232–236
Rodríguez A, Rodríguez M, Martín A et al (2012) Presence of ochratoxin A on the surface of dry-cured Iberian ham after initial fungal growth in the drying stage. Meat Sci 90:728–734
Tangni EK, Theys R, Mignolet E et al (2003) Patulin in domestic and imported apple-based drinks in Belgium: occurrence and exposure assessment. Food Addit Contam 20:482–489
Dao HP, Mathieu F, Lebrihi A (2005) Two primer pairs to detect OTA producers by PCR method. Int J Food Microbiol 36:215–220
Hayat A, Paniel N, Rhouati A et al (2012) Recent advances in ochratoxin A-producing fungi detection based on PCR methods and ochratoxin A analysis in food matrices. Food Control 26:401–415
Rodríguez A, Andrade MJ, Rodríguez M et al (2014) Detection of mycotoxin-producing moulds and mycotoxins in foods. In: Rai VR, Bai JA (eds) Microbial food safety and preservation techniques. CRC Press, New York, pp 191–213
Geisen R, Mayer Z, Karolewiez A et al (2004) Development of a Real Time PCR system for detection of Penicillium nordicum and for monitoring ochratoxin A production in foods by targeting the ochratoxin polyketide synthase gene. Syst Appl Microbiol 27:501–507
Luque MI, Rodríguez A, Andrade MJ et al (2011) Development of a PCR protocol to detect patulin producing moulds in food products. Food Control 22:1831–1838
Luque MI, Córdoba JJ, Rodríguez A et al (2013) Development of a PCR protocol to detect ochratoxin A producing moulds in food products. Food Control 29:270–278
Paterson RRM, Archer S, Kozakiewicz Z et al (2000) A gene probe for the patulin metabolic pathway with potential use in novel disease control. Biocontrol Sci Technol 10:509–512
Rodríguez A, Luque MI, Andrade MJ et al (2011) Development of real-time PCR methods to quantify patulin-producing molds in food products. Food Microbiol 28:1190–1199
Rodríguez A, Rodríguez M, Luque MI et al (2011) Quantification of ochratoxin A-producing molds in food products by SYBR Green and TaqMan real-time PCR methods. Int J Food Microbiol 149:226–235
Rodríguez A, Córdoba JJ, Werning ML et al (2012) Duplex real-time PCR method with internal amplification control for quantification of verrucosidin producing molds in dry-ripened foods. Int J Food Microbiol 153:85–91
Rodríguez A, Werning ML, Rodríguez M et al (2012) Quantitative real-time PCR method with internal amplification control to quantify cyclopiazonic acid-producing molds in foods. Food Microbiol 32:397–405
Schmidt-Heydt M, Richter W, Michulec M et al (2008) Comprehensive molecular system to study the presence, growth and ochratoxin A biosynthesis of Penicillium verrucosum in wheat. Food Addit Contam 25:989–996
Luque MI, Andrade MJ, Rodríguez A et al (2013) Development of a multiplex PCR method for the detection of patulin-, ochratoxin A- and aflatoxin-producing moulds in foods. Food Anal Meth 6:1113–1121
Rodríguez A, Rodríguez M, Andrade MJ et al (2012) Development of a multiplex real-time PCR to quantify aflatoxin, ochratoxin A and patulin producing molds in foods. Int J Food Microbiol 155:10–18
Rodríguez A (2012) Desarrollo de métodos de PCR en tiempo real para la detección y cuantificación de mohos productores de micotoxinas en alimentos. Doctoral thesis, University of Extremadura, Spain.
Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual, 2nd edn. Cold Spring Harbor Laboratory Press, New York
Mayer Z, Bagnara A, Färber P et al (2003) Quantification of the copy number of nor-1, a gene of the aflatoxin biosynthetic pathway by real-time PCR, and its correlation to the cfu of Aspergillus flavus in foods. Int J Food Microbiol 82:143–151
Rodríguez A, Rodríguez M, Córdoba JJ et al (2015) Design of primers and probes for quantitative real-time PCR methods. In: Chhandak B (ed) PCR primer design (Series: Methods in Molecular Biology). Humana Press, New York, pp 31–56
Priyanka SR, Venkataramana M, Balakrishna K et al (2015) Development and evaluation of a multiplex PCR assay for simultaneous detection of major mycotoxigenic fungi from cereals. J Food Sci Technol 52:486–492
Invitrogen (2008) Real-Time PCR: from theory to practice. Invitrogen Corporation, Carlsbad
Holland PM, Abramson RD, Watson R et al (1991) Detection of specific polymerase chain reaction product by utilizing the 50–30 exonuclease activity of Thermus aquaticus DNA polymerase. Proc Natl Acad Sci U S A 88:7276–7280
Heid CA, Stevens J, Livak KJ et al (1996) Real time quantitative PCR. Genome Res 6:986–994
Bernáldez V, Rodríguez A, Martín A et al (2014) Development of a multiplex qPCR method for simultaneous quantification in dry cured ham of an antifungal-peptide Penicillium chrysogenum strain used as protective culture and aflatoxin-producing moulds. Food Control 36:257–266
Paterson RRM (2004) The isoepoxydon dehydrogenase gene of patulin biosynthesis in cultures and secondary metabolites as candidate PCR inhibitors. Mycol Res 108:1431–1437
Richard E, Heutte N, Bouchart V et al (2009) Evaluation of fungal contamination and mycotoxin production in maize silage. Anim Feed Sci Tech 148:309–320
Applied Biosystems (2010) Fast SYBR® Green Master Mix Protocol. https://tools.lifetechnologies.com/content/sfs/manuals/cms_046776.pdf. Accessed July 2010.
Acknowledgments
This work was supported by AGL2010-21623 and Carnisenusa CSD2007-00016—ConsoliderIngenio 2010 from the Spanish Comision Interministerial de Ciencia y Tecnología projects and GR10162 of the Junta de Extremadura and FEDER. Dr. A. Rodríguez is supported by a “Juan de la Cierva-Incorporación” Senior Research Fellowship (IJCI-2014-20666) from the Spanish Ministry of Economy and Competitiveness.
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Rodríguez, A., Córdoba, J.J., Rodríguez, M., Andrade, M.J. (2017). Multiplex Detection of Toxigenic Penicillium Species. In: Moretti, A., Susca, A. (eds) Mycotoxigenic Fungi. Methods in Molecular Biology, vol 1542. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-6707-0_19
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DOI: https://doi.org/10.1007/978-1-4939-6707-0_19
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