Skip to main content

Isolation of Mitochondria, Their Sub-Organellar Compartments, and Membranes

  • Protocol
  • First Online:
Isolation of Plant Organelles and Structures

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1511))

Abstract

Mitochondria are the sites of a diverse set of essential biochemical processes in plants. In order to facilitate the analysis of these functions, this chapter presents protocols for the isolation of intact mitochondria from a range of plant tissues as well two workflows for fractionation into their four subcompartments; the inner and outer membranes and the two aqueous compartments, the inter membrane space and matrix. Protocols for the assessment of mitochondrial integrity and purity through enzymatic function and suggestions of commercially available compartment marker antibodies are provided.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 99.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 129.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 179.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Lindmark DG, Muller M (1973) Hydrogenosome, a cytoplasmic organelle of theanaerobic flagellate Tritrichomonas foetus, and its role in pyruvate metabolism. J Biol Chem 248:7724–7728

    CAS  PubMed  Google Scholar 

  2. Schneider RE, Brown MT, Shiflett AM et al (2011) The Trichomonas vaginalis hydrogenosome proteome is highly reduced relative to mitochondria, yet complex compared with mitosomes. Int J Parasitol 41:1421–1434

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  3. Tovar J, Fischer A, Clark CG (1999) The mitosome, a novel organelle related to mitochondria in the amitochondrial parasite Entamoeba histolytica. Mol Microbiol 32:1013–1021

    Article  CAS  PubMed  Google Scholar 

  4. Tovar J, Leon-Avila G, Sanchez LB et al (2003) Mitochondrial remnant organelles of Giardia function in iron-sulphur protein maturation. Nature 426:172–176

    Article  CAS  PubMed  Google Scholar 

  5. Gray MW, Burger G, Lang BF (1999) Mitochondrial evolution. Science 283:1476–1481

    Article  CAS  PubMed  Google Scholar 

  6. Cavalcanti JHF, Esteves-Ferreira AA, Quinhones CGS et al (2014) Evolution and functional implications of the tricarboxylic acid cycle as revealed by phylogenetic analysis. Genome Biol Evol 6:2830–2848

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  7. Millar AH, Whelan J, Soole KL et al (2011) Organization and regulation of mitochondrial respiration in plants. Annu Rev Plant Biol 62(62):79–104

    Article  CAS  PubMed  Google Scholar 

  8. Gray MW (2012) Mitochondrial evolution. Cold Spring Harb Perspect Biol 4:a011403

    Article  PubMed  PubMed Central  Google Scholar 

  9. Day DA, Neuburger M, Douce R (1985) Biochemical-characterization of chlorophyll-free mitochondria from Pea leaves. Aust J Plant Physiol 12:219–228

    Article  CAS  Google Scholar 

  10. Giege P, Hoffmann M, Binder S et al (2000) RNA degradation buffers asymmetries of transcription in Arabidopsis mitochondria. EMBO Rep 1:164–170

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Takenaka M, Brennicke A (2003) In vitro RNA editing in pea mitochondria requires NTP or dNTP, suggesting involvement of an RNA helicase. J Biol Chem 278:47526–47533

    Article  CAS  PubMed  Google Scholar 

  12. Kwasniak M, Majewski P, Skibior R et al (2013) Silencing of the nuclear RPS10 gene encoding mitochondrial ribosomal protein alters translation in arabidopsis mitochondria. Plant Cell 25:1855–1867

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  13. Lister R, Carrie C, Duncan O et al (2007) Functional definition of outer membrane proteins involved in preprotein import into mitochondria. Plant Cell 19:3739–3759

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  14. Jacoby RP, Millar AH, Taylor NL (2015) Assessment of respiration in isolated plant mitochondria using Clark-type electrodes. Methods Mol Biol 1305:165–185

    Article  CAS  PubMed  Google Scholar 

  15. Huang S, Lee CP, Millar AH (2015) Activity assay for plant mitochondrial enzymes. Methods Mol Biol 1305:139–149

    Article  CAS  PubMed  Google Scholar 

  16. Duncan O, Taylor NL, Carrie C et al (2011) Multiple lines of evidence localize signaling, morphology, and lipid biosynthesis machinery to the mitochondrial outer membrane of Arabidopsis. Plant Physiol 157:1093–1113

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  17. Tan YF, Millar AH, Taylor NL (2012) Components of mitochondrial oxidative phosphorylation vary in abundance following exposure to cold and chemical stresses. J Proteome Res 11:3860–3879

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgements

This work was supported through funding by the Australian Research Council (ARC) (CE140100008). NLT (FT13010123) and AHM (FT110100242) are funded as ARC Future Fellows.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Nicolas L. Taylor .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2017 Springer Science+Business Media New York

About this protocol

Cite this protocol

Duncan, O., Millar, A.H., Taylor, N.L. (2017). Isolation of Mitochondria, Their Sub-Organellar Compartments, and Membranes. In: Taylor, N., Millar, A. (eds) Isolation of Plant Organelles and Structures. Methods in Molecular Biology, vol 1511. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-6533-5_7

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-6533-5_7

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-6531-1

  • Online ISBN: 978-1-4939-6533-5

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics