Abstract
Significant progress has been made in the development of chemical biology methods used to study the molecular behavior and interplay among live cells. These include the development of novel fluorescent molecules and photo-cross-linking agents that can be used to determine the cellular locations of biomacromolecules (including proteins and nucleic acids). Various biosensors utilizing the remarkable ligand-recognition abilities of biomacromolecules have also been developed. To allow such chemically functionalized molecules to interact with their partners, and to fully exploit the abilities and functions thereof, it is necessary to efficiently deliver such molecules into cells, specifically into the cytosol. Here, we illustrate intracellular delivery methods employing arginine-rich cell-penetrating peptides (CPPs) (e.g., octa-arginine) in the presence of a counteranion, pyrenebutyrate. This approach is especially suitable for intracellular delivery of small proteins and peptides. Approaches employing arginine-rich CPPs tagged with a penetration-accelerating sequence can also be used toward this end.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Tsien RY (2009) Constructing and exploiting the fluorescent protein paintbox. Angew Chem Int Ed Engl 48:5612–5626
Chalfie M (2009) GFP: lighting up life. Angew Chem Int Ed Engl 48:5603–5611
Jung D, Min K, Jung J, Jang W, Kwon Y (2013) Chemical biology-based approaches on fluorescent labeling of proteins in live cells. Mol Biosyst 9:862–872
Kanno A, Ozawa T, Umezawa Y (2011) Detection of protein-protein interactions in bacteria by GFP-fragment reconstitution. Methods Mol Biol 705:251–258
Lukinavičius G, Johnsson K (2011) Switchable fluorophores for protein labeling in living cells. Curr Opin Chem Biol 15:768–774
Lowder MA, Appelbaum JS, Hobert EM, Schepartz A (2011) Visualizing protein partnerships in living cells and organisms. Curr Opin Chem Biol 15:781–788
Tamura T, Hamachi I (2014) Recent progress in design of protein-based fluorescent biosensors and their cellular applications. ACS Chem Biol 9(12):2708–2717
Aoki K, Komatsu N, Hirata E, Kamioka Y, Matsuda M (2012) Stable expression of FRET biosensors: a new light in cancer research. Cancer Sci 103:614–619
Hayashi T, Sun Y, Tamura T, Kuwata K, Song Z, Takaoka Y, Hamachi I (2013) Semisynthetic lectin-4-dimethylaminopyridine conjugates for labeling and profiling glycoproteins on live cell surfaces. J Am Chem Soc 135:12252–12258
Vasconcelos L, Pärn K, Langel Ü (2013) Therapeutic potential of cell-penetrating peptides. Ther Deliv 4:573–591
Futaki S, Hirose H, Nakase I (2013) Arginine-rich peptides: methods of translocation through biological membranes. Curr Pharm Des 19:2863–2868
Tünnemann G, Martin RM, Haupt S, Patsch C, Edenhofer F, Cardoso MC (2006) Cargo-dependent mode of uptake and bioavailability of TAT-containing proteins and peptides in living cells. FASEB J 20:1775–1784
Perret F, Nishihara M, Takeuchi T, Futaki S, Lazar AN, Coleman AW, Sakai N, Matile S (2005) Anionic fullerenes, calixarenes, coronenes, and pyrenes as activators of oligo/polyarginines in model membranes and live cells. J Am Chem Soc 127:1114–1115
Takeuchi T, Kosuge M, Tadokoro A, Sugiura Y, Nishi M, Kawata M, Sakai N, Matile S, Futaki S (2006) Direct and rapid cytosolic delivery using cell-penetrating peptides mediated by pyrenebutyrate. ACS Chem Biol 1:299–303
Inomata K, Ohno A, Tochio H, Isogai S, Tenno T, Nakase I, Takeuchi T, Futaki S, Ito Y, Hiroaki H, Shirakawa M (2009) High-resolution multi-dimensional NMR spectroscopy of proteins in human cells. Nature 458:106–109
Guterstam P, Madani F, Hirose H, Takeuchi T, Futaki S, El Andaloussi S, Gräslund A, Langel Ü (2009) Elucidating cell-penetrating peptide mechanisms of action for membrane interaction, cellular uptake, and translocation utilizing the hydrophobic counter-anion pyrenebutyrate. Biochim Biophys Acta 1788:2509–2517
Takayama K, Nakase I, Michiue H, Takeuchi T, Tomizawa K, Matsui H, Futaki S (2009) Enhanced intracellular delivery using arginine-rich peptides by the addition of penetration accelerating sequences (Pas). J Control Release 138:128–133
Takayama K, Hirose H, Tanaka G, Pujals S, Katayama S, Nakase I, Futaki S (2012) Effect of the attachment of a penetration accelerating sequence and the influence of hydrophobicity on octaarginine-mediated intracellular delivery. Mol Pharm 9:1222–1230
Takayama K, Tadokoro A, Pujals S, Nakase I, Giralt E, Futaki S (2009) Novel system to achieve one-pot modification of cargo molecules with oligoarginine vectors for intracellular delivery. Bioconjug Chem 20:249–257
Acknowledgment
This work was supported in part by Grants-in-Aid for Scientific Research from the Ministry of Education, Culture, Sports, Science and Technology of Japan and Collaborative Research Program of Institute for Chemical Research, Kyoto University.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2015 Springer Science+Business Media New York
About this protocol
Cite this protocol
Nakase, I., Takeuchi, T., Futaki, S. (2015). Cell Penetrating Peptides for Chemical Biological Studies. In: Langel, Ü. (eds) Cell-Penetrating Peptides. Methods in Molecular Biology, vol 1324. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-2806-4_26
Download citation
DOI: https://doi.org/10.1007/978-1-4939-2806-4_26
Publisher Name: Humana Press, New York, NY
Print ISBN: 978-1-4939-2805-7
Online ISBN: 978-1-4939-2806-4
eBook Packages: Springer Protocols