Skip to main content

Detection of Circulatory MicroRNAs in Prostate Cancer

  • Protocol
  • First Online:

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1238))

Abstract

Prostate cancer (PCa) is one of the most common cancer worldwide and accounts for 14.4 % of all new cancer cases. The clinical outcome and management of PCa can be significantly improved by use of biomarker assays for early detection, prognosis and also for prediction and monitoring of treatment response. MiRNAs are short, endogenous, single-stranded RNA molecules that play important role in regulation of gene expression and can modulate a number of cellular processes. Discovery of miRNAs in circulation has not only facilitated understanding their role in various diseases but also paved new avenues for biomarker discovery due to their ease of access and stability. The fact that a minimally invasive test based on miRNAs profiles can distinguish the presence or absence of disease illustrates immense potential of these molecules as predictive biomarkers.

In this chapter, we have summarized the presumed mechanisms of miRNA release into the circulation and systematically summarized the studies of circulatory miRNAs in PCa. Also, we have mainly focused on the methodology of identification of circulatory miRNAs from biofluids.

This is a preview of subscription content, log in via an institution.

Buying options

Protocol
USD   49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD   169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Springer Nature is developing a new tool to find and evaluate Protocols. Learn more

References

  1. Siegel R, Naishadham D, Jemal A (2013) Cancer statistics, 2013. CA Cancer J Clin 63:11–30

    Article  PubMed  Google Scholar 

  2. Yates LA, Norbury CJ, Gilbert RJ (2013) The long and short of microRNA. Cell 153:516–519

    Article  CAS  PubMed  Google Scholar 

  3. Ma R, Jiang T, Kang X (2012) Circulating microRNAs in cancer: origin, function and application. J Exp Clin Cancer Res 31:38

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  4. Mahn R, Heukamp LC, Rogenhofer S, von Ruecker A, Muller SC et al (2011) Circulating microRNAs (miRNA) in serum of patients with prostate cancer. Urology 77(1265):1265.e9–1265.e16

    Google Scholar 

  5. Sanders I, Holdenrieder S, Walgenbach-Brunagel G, von Ruecker A, Kristiansen G et al (2012) Evaluation of reference genes for the analysis of serum miRNA in patients with prostate cancer, bladder cancer and renal cell carcinoma. Int J Urol 19(11):1017–1025

    Article  CAS  PubMed  Google Scholar 

  6. Zhang HL, Yang LF, Zhu Y, Yao XD, Zhang SL et al (2011) Serum miRNA-21: elevated levels in patients with metastatic hormone-refractory prostate cancer and potential predictive factor for the efficacy of docetaxel-based chemotherapy. Prostate 71:326–331

    Article  CAS  PubMed  Google Scholar 

  7. Pang Y, Young CY, Yuan H (2010) MicroRNAs and prostate cancer. Acta Biochim Biophys Sin (Shanghai) 42:363–369

    Article  CAS  Google Scholar 

  8. Lawrie CH, Gal S, Dunlop HM, Pushkaran B, Liggins AP et al (2008) Detection of elevated levels of tumour-associated microRNAs in serum of patients with diffuse large B-cell lymphoma. Br J Haematol 141:672–675

    Article  PubMed  Google Scholar 

  9. Chen X, Ba Y, Ma L, Cai X, Yin Y et al (2008) Characterization of microRNAs in serum: a novel class of biomarkers for diagnosis of cancer and other diseases. Cell Res 18:997–1006

    Article  CAS  PubMed  Google Scholar 

  10. Creemers EE, Tijsen AJ, Pinto YM (2012) Circulating microRNAs: novel biomarkers and extracellular communicators in cardiovascular disease? Circ Res 110:483–495

    Article  CAS  PubMed  Google Scholar 

  11. El-Hefnawy T, Raja S, Kelly L, Bigbee WL, Kirkwood JM et al (2004) Characterization of amplifiable, circulating RNA in plasma and its potential as a tool for cancer diagnostics. Clin Chem 50:564–573

    Article  CAS  PubMed  Google Scholar 

  12. Valadi H, Ekstrom K, Bossios A, Sjostrand M, Lee JJ et al (2007) Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells. Nat Cell Biol 9:654–659

    Article  CAS  PubMed  Google Scholar 

  13. Wang K, Zhang S, Weber J, Baxter D, Galas DJ (2010) Export of microRNAs and microRNA-protective protein by mammalian cells. Nucleic Acids Res 38:7248–7259

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  14. Huang X, Liang M, Dittmar R, Wang L (2013) Extracellular microRNAs in urologic malignancies: chances and challenges. Int J Mol Sci 14:14785–14799

    Article  PubMed Central  PubMed  Google Scholar 

  15. Borer RA, Lehner CF, Eppenberger HM, Nigg EA (1989) Major nucleolar proteins shuttle between nucleus and cytoplasm. Cell 56:379–390

    Article  CAS  PubMed  Google Scholar 

  16. Maggi LB, Kuchenruether M, Dadey DYA, Schwope RM, Grisendi S et al (2008) Nucleophosmin serves as a rate-limiting nuclear export chaperone for the mammalian ribosome. Mol Cell Biol 28:7050–7065

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  17. Vickers K, Palmisano B, Shoucri B, Shamburek R, Remaley A (2011) MicroRNAs are transported in plasma and delivered to recipient cells by high-density lipoproteins. Nat Cell Biol 13:423–433

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  18. Zomer A, Vendrig T, Hopmans ES, Mv E, Middeldorp JM et al (2010) Exosomes: fit to deliver small RNA. Commun Integr Biol 3:447–450

    Article  PubMed Central  PubMed  Google Scholar 

  19. Srivastava A, Goldberger H, Dimtchev A, Ramalinga M, Chijioke J et al (2013) MicroRNA profiling in prostate cancer—the diagnostic potential of urinary miR-205 and miR-214. PLoS One 8:e76994

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  20. Zen K, Zhang C-Y (2012) Circulating microRNAs: a novel class of biomarkers to diagnose and monitor human cancers. Med Res Rev 32:326–348

    Article  PubMed  Google Scholar 

  21. Heneghan HM, Miller N, Kelly R, Newell J, Kerin MJ (2010) Systemic miRNA-195 differentiates breast cancer from other malignancies and is a potential biomarker for detecting noninvasive and early stage disease. Oncologist 15:673–682

    Article  PubMed Central  PubMed  Google Scholar 

  22. Mestdagh P, Van Vlierberghe P, De Weer A, Muth D, Westermann F et al (2009) A novel and universal method for microRNA RT-qPCR data normalization. Genome Biol 10:R64

    Article  PubMed Central  PubMed  Google Scholar 

  23. Andersen CL, Jensen JL, Ãrntoft TF (2004) Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Res 64:5245–5250

    Article  CAS  PubMed  Google Scholar 

  24. Mitchell PS, Parkin RK, Kroh EM, Fritz BR, Wyman SK et al (2008) Circulating microRNAs as stable blood-based markers for cancer detection. Proc Natl Acad Sci U S A 105:10513–10518

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  25. Lodes MJ, Caraballo M, Suciu D, Munro S, Kumar A et al (2009) Detection of cancer with serum miRNAs on an oligonucleotide microarray. PLoS One 4:e6229

    Article  PubMed Central  PubMed  Google Scholar 

  26. Brase JC, Johannes M, Schlomm T, Fälth M, Haese A et al (2011) Circulating miRNAs are correlated with tumor progression in prostate cancer. Int J Cancer 128:608–616

    Article  CAS  PubMed  Google Scholar 

  27. Yaman Agaoglu F, Kovancilar M, Dizdar Y, Darendeliler E, Holdenrieder S et al (2011) Investigation of miR-21, miR-141, and miR-221 in blood circulation of patients with prostate cancer. Tumor Biol 32:583–588

    Article  CAS  Google Scholar 

  28. Moltzahn F, Olshen AB, Baehner L, Peek A, Fong L et al (2011) Microfluidic-based multiplex qRT-PCR identifies diagnostic and prognostic microRNA signatures in the sera of prostate cancer patients. Cancer Res 71:550–560

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  29. Zheng C, Yinghao S, Li J (2012) MiR-221 expression affects invasion potential of human prostate carcinoma cell lines by targeting DVL2. Med Oncol 29:815–822

    Article  CAS  PubMed  Google Scholar 

  30. Gonzales JC, Fink LM, Goodman OB Jr, Symanowski JT, Vogelzang NJ et al (2011) Comparison of circulating microRNA 141 to circulating tumor cells, lactate dehydrogenase, and prostate-specific antigen for determining treatment response in patients with metastatic prostate cancer. Clin Genitourin Cancer 9:39–45

    Article  PubMed  Google Scholar 

  31. Selth LA, Townley S, Gillis JL, Ochnik AM, Murti K et al (2012) Discovery of circulating microRNAs associated with human prostate cancer using a mouse model of disease. Int J Cancer 131:652–661

    Article  CAS  PubMed  Google Scholar 

  32. Shen J, Hruby GW, McKiernan JM, Gurvich I, Lipsky MJ et al (2012) Dysregulation of circulating microRNAs and prediction of aggressive prostate cancer. Prostate 72:1469–1477

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  33. Chen Z-H, Zhang G-L, Li H-R, Luo J-D, Li Z-X et al (2012) A panel of five circulating microRNAs as potential biomarkers for prostate cancer. Prostate 72:1443–1452

    Article  CAS  PubMed  Google Scholar 

  34. Nguyen HCN, Xie W, Yang M, Hsieh C-L, Drouin S et al (2013) Expression differences of circulating microRNAs in metastatic castration resistant prostate cancer and low-risk, localized prostate cancer. Prostate 73:346–354

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  35. Cheng HH, Mitchell PS, Kroh EM, Dowell AE, Chéry L et al (2013) Circulating microRNA profiling identifies a subset of metastatic prostate cancer patients with evidence of cancer-associated hypoxia. PLoS One 8:e69239

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  36. Selth LA, Townley SL, Bert AG, Stricker PD, Sutherland PD et al (2013) Circulating microRNAs predict biochemical recurrence in prostate cancer patients. Br J Cancer 109:641–650

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  37. Watahiki A, Macfarlane R, Gleave M, Crea F, Wang Y et al (2013) Plasma miRNAs as biomarkers to identify patients with castration-resistant metastatic prostate cancer. Int J Mol Sci 14:7757–7770

    Article  PubMed Central  PubMed  Google Scholar 

  38. Bryant RJ, Pawlowski T, Catto JWF, Marsden G, Vessella RL et al (2012) Changes in circulating microRNA levels associated with prostate cancer. Br J Cancer 106:768–774

    Article  CAS  PubMed Central  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Deepak Kumar Ph.D. .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2015 Springer Science+Business Media New York

About this protocol

Cite this protocol

Srivastava, A., Goldberger, H., Afzal, Z., Suy, S., Collins, S.P., Kumar, D. (2015). Detection of Circulatory MicroRNAs in Prostate Cancer. In: Verma, M. (eds) Cancer Epigenetics. Methods in Molecular Biology, vol 1238. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-1804-1_27

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-1804-1_27

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-1803-4

  • Online ISBN: 978-1-4939-1804-1

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics