Skip to main content

Targeted In Vivo Delivery of siRNA and an Endosome-Releasing Agent to Hepatocytes

  • Protocol
  • First Online:
RNA Interference

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1218))

Abstract

The discoveries of RNA interference (RNAi) and short interfering RNAs (siRNAs) have provided the opportunity to treat diseases in a fundamentally new way: by co-opting a natural process to inhibit gene expression at the mRNA level. Given that siRNAs must interact with the cells’ natural RNAi machinery in order to exert their silencing effect, one of the most fundamental requirements for their use is efficient delivery to the desired cell type and, specifically, into the cytoplasm of those cells. Numerous research efforts involving the testing of a large number of delivery approaches using various carrier molecules and inventing several distinct formulation technologies during the past decade illustrate the difficulty and complexity of this task. We have developed synthetic polymer formulations for in vivo siRNA delivery named Dynamic PolyConjugates™ (DPCs) that are designed to mimic the features viruses possess for efficient delivery of their nucleic acids. These include small size, long half-life in circulation, capability of displaying distinct host cell tropism, efficient receptor binding and cell entry, disassembly in the endosome and subsequent release of the nucleic acid cargo to the cytoplasm. Here we present an example of this delivery platform composed of a hepatocyte-targeted endosome-releasing agent and a cholesterol-conjugated siRNA (chol-siRNA). This delivery platform forms the basis of ARC-520, an siRNA-based therapeutic for the treatment of chronic hepatitis B virus (HBV) infection. In this chapter, we provide a general overview of the steps in developing ARC-520 and detailed protocols for two critical stages of the discovery process: (1) verifying targeted in vivo delivery to hepatocytes and (2) evaluating in vivo drug efficacy using a mouse model of chronic HBV infection.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Rozema DB, Lewis DL, Wakefield DH, Wong SC, Klein JJ, Roesch PL, Bertin SL, Reppen TW, Chu Q, Blokhin AV et al (2007) Dynamic polyconjugates for targeted in vivo delivery of siRNA to hepatocytes. Proc Natl Acad Sci U S A 104:12982–12987

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  2. Wakefield DH, Klein JJ, Wolff JA, Rozema DB (2005) Membrane activity and transfection ability of amphipathic polycations as a function of alkyl group size. Bioconjug Chem 16: 1204–1208

    Article  PubMed  CAS  Google Scholar 

  3. Rozema DB, Ekena K, Lewis DL, Loomis AG, Wolff JA (2003) Endosomolysis by masking of a membrane-active agent (EMMA) for cytoplasmic release of macromolecules. Bioconjug Chem 14:51–57

    Article  PubMed  CAS  Google Scholar 

  4. Soutschek J, Akinc A, Bramlage B, Charisse K, Constien R, Donoghue M, Elbashir S, Geick A, Hadwiger P, Harborth J et al (2004) Therapeutic silencing of an endogenous gene by systemic administration of modified siRNAs. Nature 432:173–178

    Article  PubMed  CAS  Google Scholar 

  5. Wolfrum C, Shi S, Jayaprakash KN, Jayaraman M, Wang G, Pandey RK, Rajeev KG, Nakayama T, Charrise K, Ndungo EM et al (2007) Mechanisms and optimization of in vivo delivery of lipophilic siRNAs. Nat Biotechnol 25:1149–1157

    Article  PubMed  CAS  Google Scholar 

  6. Wong SC, Klein JJ, Hamilton HL, Chu Q, Frey CL, Trubetskoy VS, Hegge J, Wakefield D, Rozema DB, Lewis DL (2012) Co-injection of a targeted, reversibly masked endosomolytic polymer dramatically improves the efficacy of cholesterol-conjugated small interfering RNAs in vivo. Nucleic Acid Ther 22:380–390

    PubMed  CAS  PubMed Central  Google Scholar 

  7. Wooddell CI, Rozema DB, Hossbach M, John M, Hamilton HL, Chu Q, Hegge JO, Klein JJ, Wakefield DH, Oropeza CE et al (2013) Hepatocyte-targeted RNAi therapeutics for the treatment of chronic hepatitis B virus infection. Mol Ther J Am Soc Gene Ther 21:973–985

    Article  CAS  Google Scholar 

  8. Chisari FV, Ferrari C (1995) Hepatitis B virus immunopathology. Springer Semin Immunopathol 17:261–281

    Article  PubMed  CAS  Google Scholar 

  9. Wherry EJ (2011) T cell exhaustion. Nat Immunol 12:492–499

    Article  PubMed  CAS  Google Scholar 

  10. Brunetto MR, Moriconi F, Bonino F, Lau GK, Farci P, Yurdaydin C, Piratvisuth T, Luo K, Wang Y, Hadziyannis S et al (2009) Hepatitis B virus surface antigen levels: a guide to sustained response to peginterferon alfa-2a in HBeAg-negative chronic hepatitis B. Hepatology 49:1141–1150

    Article  PubMed  CAS  Google Scholar 

  11. Heathcote EJ, Marcellin P, Buti M, Gane E, De Man RA, Krastev Z, Germanidis G, Lee SS, Flisiak R, Kaita K et al (2011) Three-year efficacy and safety of tenofovir disoproxil fumarate treatment for chronic hepatitis B. Gastroenterology 140:132–143

    Article  PubMed  CAS  Google Scholar 

  12. Moucari R, Korevaar A, Lada O, Martinot-Peignoux M, Boyer N, Mackiewicz V, Dauvergne A, Cardoso AC, Asselah T, Nicolas-Chanoine MH et al (2009) High rates of HBsAg seroconversion in HBeAg-positive chronic hepatitis B patients responding to interferon: a long-term follow-up study. J Hepatol 50:1084–1092

    Article  PubMed  CAS  Google Scholar 

  13. Moucari R, Mackiewicz V, Lada O, Ripault MP, Castelnau C, Martinot-Peignoux M, Dauvergne A, Asselah T, Boyer N, Bedossa P et al (2009) Early serum HBsAg drop: a strong predictor of sustained virological response to pegylated interferon alfa-2a in HBeAg-negative patients. Hepatology 49:1151–1157

    Article  PubMed  CAS  Google Scholar 

  14. Gish RG, Chang TT, Lai CL, de Man R, Gadano A, Poordad F, Yang J, Brett-Smith H, Tamez R (2010) Loss of HBsAg antigen during treatment with entecavir or lamivudine in nucleoside-naive HBeAg-positive patients with chronic hepatitis B. J Viral Hepat 17:16–22

    Article  PubMed  CAS  Google Scholar 

  15. Jackson AL, Burchard J, Leake D, Reynolds A, Schelter J, Guo J, Johnson JM, Lim L, Karpilow J, Nichols K et al (2006) Position-specific chemical modification of siRNAs reduces “off-target” transcript silencing. RNA 12:1197–1205

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  16. Morrissey DV, Lockridge JA, Shaw L, Blanchard K, Jensen K, Breen W, Hartsough K, Machemer L, Radka S, Jadhav V et al (2005) Potent and persistent in vivo anti-HBV activity of chemically modified siRNAs. Nat Biotechnol 23:1002–1007

    Article  PubMed  CAS  Google Scholar 

  17. Sioud M, Furset G, Cekaite L (2007) Suppression of immunostimulatory siRNA-driven innate immune activation by 2′-modified RNAs. Biochem Biophys Res Commun 361:122–126

    Article  PubMed  CAS  Google Scholar 

  18. Guidotti LG, Matzke B, Schaller H, Chisari FV (1995) High-level hepatitis B virus replication in transgenic mice. J Virol 69:6158–6169

    PubMed  CAS  PubMed Central  Google Scholar 

  19. Yang PL, Althage A, Chung J, Chisari FV (2002) Hydrodynamic injection of viral DNA: a mouse model of acute hepatitis B virus infection. Proc Natl Acad Sci U S A 99:13825–13830

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  20. Zhang G, Budker V, Wolff JA (1999) High levels of foreign gene expression in hepatocytes after tail vein injection of naked plasmid DNA. Hum Gene Ther 10:1735–1737

    Article  PubMed  CAS  Google Scholar 

  21. Chabot S, Orio J, Schmeer M, Schleef M, Golzio M, Teissie J (2012) Minicircle DNA electrotransfer for efficient tissue-targeted gene delivery. Gene Ther 23(1):128–137

    Article  Google Scholar 

  22. Wooddell CI, Van Hout CV, Reppen T, Lewis DL, Herweijer H (2005) Long-term RNA interference from optimized siRNA expression constructs in adult mice. Biochem Biophys Res Commun 334:117–127

    Article  PubMed  CAS  Google Scholar 

  23. Wooddell CI, Reppen T, Wolff JA, Herweijer H (2008) Sustained liver-specific transgene expression from the albumin promoter in mice following hydrodynamic plasmid DNA delivery. J Gene Med 10:551–563

    Article  PubMed  CAS  Google Scholar 

  24. Chen Y, Cheng G, Mahato RI (2008) RNAi for treating hepatitis B viral infection. Pharm Res 25:72–86

    Article  PubMed  CAS  PubMed Central  Google Scholar 

Download references

Acknowledgements

We thank (1) the members of the Axolabs GmbH (formerly Roche Kulmbach RNA Therapeutics) for siRNA synthesis and selection of human HBV-specific siRNA sequences; (2) the members of the McLachlan lab at the Department of Microbiology and Immunology of the University of Illinois, Chicago, for performing in vivo efficacy studies using the transgenic mouse model of chronic HBV infection; (3) all members of the Chemistry, Formulation, Biology, Laboratory Animal Resources, Assay, and Clinical Development Groups of Arrowhead Madison for contributing to various phases of developing ARC-520 for clinical use. Their invaluable contributions were also acknowledged in previous publications [1, 2, 6, 7].

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Christine I. Wooddell .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2015 Springer Science+Business Media New York

About this protocol

Cite this protocol

Sebestyén, M.G., Wong, S.C., Trubetskoy, V., Lewis, D.L., Wooddell, C.I. (2015). Targeted In Vivo Delivery of siRNA and an Endosome-Releasing Agent to Hepatocytes. In: Sioud, M. (eds) RNA Interference. Methods in Molecular Biology, vol 1218. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-1538-5_10

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-1538-5_10

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-1537-8

  • Online ISBN: 978-1-4939-1538-5

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics