Skip to main content

Use of Serum-Circulating miRNA Profiling for the Identification of Breast Cancer Biomarkers

  • Protocol
  • First Online:

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1165))

Abstract

MicroRNAs (miRNAs) are important regulatory molecules involved in disease pathogenesis. miRNAs are very stable in bodily fluids and can be detected in serum, plasma, saliva, and urine, among other fluids. Several studies have demonstrated the usefulness of serum miRNAs as potential biomarkers for detecting and monitoring cancer progression. Here, we describe in detail the experiment protocol we used to profile miRNA expression in the serum of breast cancer patients, including RNA extraction from serum, RT-qPCR quantification, and analysis of the deregulated miRNAs. Detection of circulating miRNAs may be a useful, noninvasive diagnostic tool for breast cancer.

This is a preview of subscription content, log in via an institution.

Buying options

Protocol
USD   49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   119.00
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD   109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Springer Nature is developing a new tool to find and evaluate Protocols. Learn more

References

  1. Lee RC, Feinbaum RL, Ambros V (1993) The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell 75:843–854

    Article  CAS  PubMed  Google Scholar 

  2. Bartel DP (2009) MicroRNAs: target recognition and regulatory functions. Cell 136:215–233

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  3. Du T, Zamore PD (2005) microPrimer: the biogenesis and function of microRNA. Development 132:4645–4652

    Article  CAS  PubMed  Google Scholar 

  4. Cortez MA, Calin GA (2009) MicroRNA identification in plasma and serum: a new tool to diagnose and monitor diseases. Expert Opin Biol Ther 9:703–711

    Article  CAS  PubMed  Google Scholar 

  5. Mitchell PS, Parkin RK, Kroh EM et al (2008) Circulating microRNAs as stable blood-based markers for cancer detection. Proc Natl Acad Sci U S A 105:10513–10518

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  6. Park NJ, Zhou H, Elashoff D et al (2009) Salivary microRNA: discovery, characterization, and clinical utility for oral cancer detection. Clin Cancer Res 15:5473–5477

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  7. Caby MP, Lankar D, Vincendeau-Scherrer C et al (2005) Exosomal-like vesicles are present in human blood plasma. Int Immunol 17:879–887

    Article  CAS  PubMed  Google Scholar 

  8. Orozco AF, Lewis DE (2010) Flow cytometric analysis of circulating microparticles in plasma. Cytometry A 77:502–514

    Article  PubMed Central  PubMed  Google Scholar 

  9. Record M, Subra C, Silvente-Poirot S et al (2011) Exosomes as intercellular signalosomes and pharmacological effectors. Biochem Pharmacol 81:1171–1182

    Article  CAS  PubMed  Google Scholar 

  10. Parkin DM, Bray F, Ferlay J et al (2005) Global cancer statistics, 2002. CA Cancer J Clin 55:74–108

    Article  PubMed  Google Scholar 

  11. Rim A, Chellman-Jeffers M (2008) Trends in breast cancer screening and diagnosis. Cleve Clin J Med 75(Suppl 1):S2–S9

    Article  PubMed  Google Scholar 

  12. Nattinger AB (2010) In the clinic. Breast cancer screening and prevention. Ann Intern Med 152:ITC41

    PubMed  Google Scholar 

  13. Lodes MJ, Caraballo M, Suciu D et al (2009) Detection of cancer with serum miRNAs on an oligonucleotide microarray. PLoS One 4:e6229

    Article  PubMed Central  PubMed  Google Scholar 

  14. Zhao H, Shen J, Medico L et al (2010) A pilot study of circulating miRNAs as potential biomarkers of early stage breast cancer. PLoS One 5:e13735

    Article  PubMed Central  PubMed  Google Scholar 

  15. Asaga S, Kuo C, Nguyen T et al (2011) Direct serum assay for microRNA-21 concentrations in early and advanced breast cancer. Clin Chem 57:84–91

    Article  CAS  PubMed  Google Scholar 

  16. Mar-Aguilar F, Mendoza-Ramirez JA, Malagon-Santiago I et al (2013) Serum circulating microRNA profiling for identification of potential breast cancer biomarkers. Dis Markers 34:163–169

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  17. Wittmann J, Jack HM (2010) Serum microRNAs as powerful cancer biomarkers. Biochim Biophys Acta 1806:200–207

    CAS  PubMed  Google Scholar 

  18. Zhu W, Qin W, Atasoy U et al (2009) Circulating microRNAs in breast cancer and healthy subjects. BMC Res Notes 2:89

    Article  PubMed Central  PubMed  Google Scholar 

  19. Tripepi G, Jager KJ, Dekker FW et al (2009) Diagnostic methods 2: receiver operating characteristic (ROC) curves. Kidney Int 76:252–256

    Article  PubMed  Google Scholar 

Download references

Acknowledgements

We would like to thank Perla K. Espino-Silva, Sandra K. Santuario-Facio, and Pablo Ruiz-Flores for the samples of breast cancer patients; Ismael Malagón-Santiago for statistical analysis; Alejandra Arreola-Triana for editorial review of this manuscript; and the Teachers’ Improvement Program (PROMEP) grants 103.5/07/2523 and 103.5/08/4285 for their financial support.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Diana Reséndez-Pérez .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2014 Springer Science+Business Media New York

About this protocol

Cite this protocol

Mar-Aguilar, F., Rodríguez-Padilla, C., Reséndez-Pérez, D. (2014). Use of Serum-Circulating miRNA Profiling for the Identification of Breast Cancer Biomarkers. In: Robles-Flores, M. (eds) Cancer Cell Signaling. Methods in Molecular Biology, vol 1165. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-0856-1_6

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-0856-1_6

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-0855-4

  • Online ISBN: 978-1-4939-0856-1

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics