Abstract
The evaluation of genotoxicity and carcinogenicity is an essential prerequisite for the assessment of pharmaceuticals’, industrial chemicals’, and consumer products’ potential hazard and for their marketing authorization. A number of well-established in vitro and in vivo testing methods are available and able to predict genotoxic and carcinogenic potential; yet research is ongoing and is aimed at the development of a new generation of in vitro tests to enhance their predictivity and performance and to reduce the number of animals used.
In this context, this chapter is meant to review the existing in vitro testing methods and update on the emerging in vitro approaches for the assessment of genotoxicity and carcinogenicity.
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Notes
- 1.
It is noted that not all genotoxic events lead to mutagenicity and that some prefer the terminology “mutagenic mode of action.” However, genotoxicity assays are still commonly used to distinguish those chemicals with the potential to directly affect the integrity of DNA from those that do not, so for the sake of simplicity, the text throughout refers to genotoxic versus non-genotoxic carcinogens.
References
ICH S2(R1) (2012) ICH guideline S2 (R1) on genotoxicity testing and data interpretation for pharmaceuticals intended for human use. EMA/CHMP/ICH/126642/2008:1–28
Regulation (EC) No 283/2013 (2013) Commission Regulation (EU) No 283/2013 setting out the data requirements for active substances, in accordance with Regulation (EC) No 1107/2009 of the European Parliament and of the Council concerning the placing of plant protection products on the market. OJ L 93 of 01032013:1–84
Regulation (EC) No 284/2013 (2013) Commission Regulation (EU) No 284/2013 setting out the data requirements for plant protection products, in accordance with Regulation (EC) No 1107/2009 of the European Parliament and of the Council concerning the placing of plant protection products on the market (Text with EEA relevance). OJ L 93 of 01032013:85–152
Regulation (EC) No 528/2012 (2012) Regulation of the European Parliament and of the Council of 22 May 2012 concerning the making available on the market and use of biocidal products (Text with EEA relevance). OJ L 167 of 22052012:1–123
Regulation (EC) No 1107/2009b (2009) Regulation (EC) No 1107/2009 of the European Parliament and of the Council of 21 October 2009 concerning the placing of plant protection products on the market and repealing Council Directives 79/117/EEC and 91/414/EEC. OJ L 309 of 24112009:1–50
Regulation (EC) No 1223/2009 (2009) Regulation of the European Parliament and of the Council of 30 November 2009 on cosmetic products (Text with EEA relevance). OJ L 342 of 22122009
Regulation (EC) No 1907/2006 (2006) Regulation (EC) No 1907/2006 of the European Parliament and the Council of 18 December 2006 concerning the registration, evaluation, authorisation and restriction of chemicals (REACH), establishing a European Chemicals Agency, amending Directive 1999/45/EC and repealing Council Regulation (EEC) No 793/93 and Commission Regulation (EC) No 1488/94 as well as Council Directive 76/769/EEC and Commission Directives 91/155/EEC, 93/67/EEC, 93/105/EC and 2000/21/EC. OJ L 396 of 30122006:1–849
VICH (2004) GL23, (Safety: Genotoxicity) studies to evaluate the safety of residues of veterinary drugs in human food: genotoxicity testing. Revision 1 May 2004 for implementation at step 7
VICH (2005) GL28 (SAFETY: CARCINOGENICITY) Studies to evaluate the safety of residues of veterinary drugs in human food: carcinogenicity testing. February 2005 for implementation at step 7—final
Regulation (EC) No 1272/2008 (2008) Regulation (EC) No 1272/2008 of the European Parliament and of the Council of 16 December 2008 on classification, labelling and packaging of substances and mixtures, amending and repealing Directives 67/548/EEC and 1999/45/EC, and amending Regulation (EC) No 1907/2006. OJ L 353 of 16122008:1–1355
GHS (2011) Globally harmonized system of classification and labelling of chemicals, United Nations. ST/SG/AC10/30/Rev4
SCCS/1501/12 (2012) The SCCS’S notes of guidance for the testing of cosmetics substances and their safety evaluation. 8th Revision. SCCS notes of guidance:1–117
Adler S, Basketter D, Creton S, Pelkonen O, van Benthem J et al (2011) Alternative (non-animal) methods for cosmetics testing: current status and future prospects-2010. Arch Toxicol 85:367–485
Erickson RP (2010) Somatic gene mutation and human disease other than cancer: an update. Mutat Res 705:96–106
De Flora S, Izzotti A (2007) Mutagenesis and cardiovascular diseases molecular mechanisms, risk factors, and protective factors. Mutat Res 621(1–2):5–17
Hoeijmakers JH (2009) DNA damage, aging, and cancer. N Engl J Med 361:1475–1485
Slatter MA, Gennery AR (2010) Primary immunodeficiencies associated with DNA-repair disorders. Expert Rev Mol Med 12:e9
Frank SA (2010) Evolution in health and medicine Sackler colloquium: somatic evolutionary genomics: mutations during development cause highly variable genetic mosaicism with risk of cancer and neurodegeneration. Proc Natl Acad Sci U S A 107(Suppl 1):1725–1730
EFSA (2011) Scientific opinion—guidance on the risk assessment of genetically modified microorganisms and their products intended for food and feed use. EFSA J 9:1–54
ECHA (2012) Guidance on information requirements and chemical safety assessment Chapter R.7a: endpoint specific guidance version 2.0 November 2012, R.7.7. Mutagenicity and carcinogenicity. http://ihcp.jrc.ec.europa.eu/our_labs/eurl-ecvam/eurl-ecvam-recommendations/files-bhas/EURL_ECVAM_Recommendation_Bhas-CTA_2013.pdf
COM (2011) Guidance on a Strategy for Testing of Chemicals for Mutagenicity. Committee on Mutagenicity of Chemicals in Food, Consumer Products and the Environment (COM). Department of Health, London. http://www.iacom.org.uk/guidstate/documents/COMGuidanceFINAL2.pdf
Loeb LA, Harris CC (2008) Advances in chemical carcinogenesis: a historical review and prospective. Cancer Res 68:6863–6872
Loeb LA, Loeb KR, Anderson JP (2003) Multiple mutations and cancer. Proc Natl Acad Sci U S A 100:776–781
Sarasin A (2003) An overview of the mechanisms of mutagenesis and carcinogenesis. Mutat Res 544:99–106
Markowitz SD, Bertagnolli MM (2009) Molecular origins of cancer: molecular basis of colorectal cancer. N Engl J Med 361: 2449–2460
Cunningham D, Atkin W, Lenz HJ, Lynch HT, Minsky B et al (2010) Colorectal cancer. Lancet 375:1030–1047
Migheli F, Migliore L (2012) Epigenetics of colorectal cancer. Clin Genet 81:312–318
Lopez-Lazaro M (2010) A new view of carcinogenesis and an alternative approach to cancer therapy. Mol Med 16:144–153
Via LD, Garcia-Argaez AN, Martinez-Vazquez M, Grancara S, Martinis P, et al (2014) Mitochondrial permeability transition as target of anticancer drugs. Curr Pharm Des 20:223–244
Paules RS, Aubrecht J, Corvi R, Garthoff B, Kleinjans JC (2011) Moving forward in human cancer risk assessment. Environ Health Perspect 119:739–743
Knight A, Bailey J, Balcombe J (2005) Which drugs cause cancer? For BMJ 331:E389–E391
Knight A, Bailey J, Balcombe J (2006) Animal carcinogenicity studies: implications for the REACH system. Altern Lab Anim 34(Suppl 1):139–147
Kirkland D, Aardema M, Henderson L, Muller L (2005) Evaluation of the ability of a battery of three in vitro genotoxicity tests to discriminate rodent carcinogens and non-carcinogens I. Sensitivity, specificity and relative predictivity. Mutat Res 584:1–256
Kirkland D, Pfuhler S, Tweats D, Aardema M, Corvi R et al (2007) How to reduce false positive results when undertaking in vitro genotoxicity testing and thus avoid unnecessary follow-up animal tests: Report of an ECVAM Workshop. Mutat Res 628:31–55
Parry JM, Parry E, Phrakonkham P, Corvi R (2010) Analysis of published data for top concentration considerations in mammalian cell genotoxicity testing. Mutagenesis 25: 531–538
Kirkland D, Fowler P (2010) Further analysis of Ames-negative rodent carcinogens that are only genotoxic in mammalian cells in vitro at concentrations exceeding 1 mM, including retesting of compounds of concern. Mutagenesis 25:539–553
Fowler P, Smith K, Young J, Jeffrey L, Kirkland D et al (2012) Reduction of misleading (“false”) positive results in mammalian cell genotoxicity assays. I. Choice of cell type. Mutat Res 742:11–25
Fowler P, Smith R, Smith K, Young J, Jeffrey L et al (2012) Reduction of misleading (“false”) positive results in mammalian cell genotoxicity assays. II. Importance of accurate toxicity measurement. Mutat Res 747: 104–117
OECD (1997) Test No. 471: Bacterial Reverse Mutation Test: OECD publishing
Ames BN (1971) The detection of chemical mutagens with enteric bacteria. In: Hollaender A (ed) Chemical mutagens, principles and methods for their detection. Plenum, New York, pp 267–282
McCann J, Ames BN (1976) Detection of carcinogens as mutagens in the Salmonella/microsome test: assay of 300 chemicals: discussion. Proc Natl Acad Sci U S A 73: 950–954
Mortelmans K, Zeiger E (2000) The Ames Salmonella/microsome mutagenicity assay. Mutat Res 455:29–60
Gatehouse D, Haworth S, Cebula T, Gocke E, Kier L et al (1994) Recommendations for the performance of bacterial mutation assays. Mutat Res 312:217–233
Wilcox P, Naidoo A, Wedd DJ, Gatehouse DG (1990) Comparison of Salmonella typhimurium TA102 with Escherichia coli WP2 tester strains. Mutagenesis 5:285–291
Clare G (2012) The in vitro mammalian chromosome aberration test. Methods Mol Biol 817:69–91
OECD (1997) Test No. 473: In Vitro Mammalian Chromosome Aberration Test: OECD Publishing
Hozier J, Sawyer J, Clive D, Moore M (1982) Cytogenetic distinction between the TK + and TK− chromosomes in the L5178Y TK+/− 3.7.2C mouse-lymphoma cell line. Mutat Res 105:451–456
Sawyer J, Moore MM, Clive D, Hozier J (1985) Cytogenetic characterization of the L5178Y TK+/−3.7.2C mouse lymphoma cell line. Mutat Res 147:243–253
Zhang LS, Honma M, Matsuoka A, Suzuki T, Sofuni T et al (1996) Chromosome painting analysis of spontaneous and methyl methanesulfonate-induced trifluorothymidine-resistant L5178Y cell colonies. Mutat Res 370:181–190
Clive D, Glover P, Applegate M, Hozier J (1990) Molecular aspects of chemical mutagenesis in L5178Y/tk +/− mouse lymphoma cells. Mutagenesis 5:191–197
Applegate ML, Moore MM, Broder CB, Burrell A, Juhn G et al (1990) Molecular dissection of mutations at the heterozygous thymidine kinase locus in mouse lymphoma cells. Proc Natl Acad Sci U S A 87:51–55
Moore MM, Honma M, Clements J, Bolcsfoldi G, Burlinson B et al (2007) Mouse lymphoma thymidine kinase gene mutation assay: meeting of the International Workshop on Genotoxicity Testing, San Francisco, 2005, recommendations for 24-h treatment. Mutat Res 627:36–40
Wang J, Sawyer JR, Chen L, Chen T, Honma M et al (2009) The mouse lymphoma assay detects recombination, deletion, and aneuploidy. Toxicol Sci 109:96–105
OECD (1997) Test No. 476: In Vitro Mammalian Cell Gene Mutation Test: OECD Publishing
Johnson GE (2012) Mammalian cell HPRT gene mutation assay: test methods. Methods Mol Biol 817:55–67
Lloyd M, Kidd D (2012) The mouse lymphoma assay. Methods Mol Biol 817:35–54
Corvi R, Ahr HJ, Albertini S, Blakey DH, Clerici L et al (2006) Meeting report: validation of toxicogenomics-based test systems: ECVAM-ICCVAM/NICEATM considerations for regulatory use. Environ Health Perspect 114:420–429
Corvi R, Albertini S, Hartung T, Hoffmann S, Maurici D et al (2008) ECVAM retrospective validation of in vitro micronucleus test (MNT). Mutagenesis 23:271–283
ECVAM (2006) Statement by the European Centre for the Validation of Alternative Methods (ECVAM) Scientific Advisory Committee (ESAC) on the scientific validity of the in vitro micronucleus test as an alternative to the in vitro chromosome aberration assay for genotoxicity testing. ESAC 25th meeting. http://ecvamjrcit/indexhtm. Accessed 16–17 Nov 2006
OECD (2010) Test No. 487: In Vitro Mammalian Cell Micronucleus Test: OECD Publishing
Zhang LS, Honma M, Hayashi M, Suzuki T, Matsuoka A et al (1995) A comparative study of TK6 human lymphoblastoid and L5178Y mouse lymphoma cell lines in the in vitro micronucleus test. Mutat Res 347:105–115
Ehrlich V, Darroudi F, Uhl M, Steinkellner H, Zsivkovits M et al (2002) Fumonisin B(1) is genotoxic in human derived hepatoma (HepG2) cells. Mutagenesis 17:257–260
Knasmuller S, Mersch-Sundermann V, Kevekordes S, Darroudi F, Huber WW et al (2004) Use of human-derived liver cell lines for the detection of environmental and dietary genotoxicants; current state of knowledge. Toxicology 198:315–328
Westerink WM, Schirris TJ, Horbach GJ, Schoonen WG (2011) Development and validation of a high-content screening in vitro micronucleus assay in CHO-k1 and HepG2 cells. Mutat Res 724:7–21
Gibson DP, Brauninger R, Shaffi HS, Kerckaert GA, LeBoeuf RA et al (1997) Induction of micronuclei in Syrian hamster embryo cells: comparison to results in the SHE cell transformation assay for National Toxicology Program test chemicals. Mutat Res 392:61–70
Elhajouji A, Lukamowicz-Rajska M (2013) Flow cytometric determination of micronucleus frequency. Methods Mol Biol 1044:209–235
Fenech M, Kirsch-Volders M, Rossnerova A, Sram R, Romm H et al (2013) HUMN project initiative and review of validation, quality control and prospects for further development of automated micronucleus assays using image cytometry systems. Int J Hyg Environ Health 216:541–552
Curren RD, Mun GC, Gibson DP, Aardema MJ (2006) Development of a method for assessing micronucleus induction in a 3D human skin model (EpiDerm). Mutat Res 607:192–204
Mun GC, Aardema MJ, Hu T, Barnett B, Kaluzhny Y et al (2009) Further development of the EpiDerm 3D reconstructed human skin micronucleus (RSMN) assay. Mutat Res 673:92–99
Hu T, Kaluzhny Y, Mun GC, Barnett B, Karetsky V et al (2009) Intralaboratory and interlaboratory evaluation of the EpiDerm 3D human reconstructed skin micronucleus (RSMN) assay. Mutat Res 673:100–108
Aardema MJ, Barnett BC, Khambatta Z, Reisinger K, Ouedraogo-Arras G et al (2010) International prevalidation studies of the EpiDerm 3D human reconstructed skin micronucleus (RSMN) assay: transferability and reproducibility. Mutat Res 701:123–131
Kirsch-Volders M, Decordier I, Elhajouji A, Plas G, Aardema MJ et al (2011) In vitro genotoxicity testing using the micronucleus assay in cell lines, human lymphocytes and 3D human skin models. Mutagenesis 26:177–184
Gotz C, Pfeiffer R, Tigges J, Blatz V, Jackh C et al (2012) Xenobiotic metabolism capacities of human skin in comparison with a 3D epidermis model and keratinocyte-based cell culture as in vitro alternatives for chemical testing: activating enzymes (Phase I). Exp Dermatol 21:358–363
Brinkmann J, Stolpmann K, Trappe S, Otter T, Genkinger D et al (2013) Metabolically competent human skin models: activation and genotoxicity of benzo[a]pyrene. Toxicol Sci 131:351–359
Flamand N, Marrot L, Belaidi JP, Bourouf L, Dourille E et al (2006) Development of genotoxicity test procedures with Episkin, a reconstructed human skin model: towards new tools for in vitro risk assessment of dermally applied compounds? Mutat Res 606: 39–51
Pfuhler S, Fellows M, van Benthem J, Corvi R, Curren R et al (2011) In vitro genotoxicity test approaches with better predictivity: summary of an IWGT workshop. Mutat Res 723:101–107
Reus AA, Reisinger K, Downs TR, Carr G, Zeller A, Corvi R, Krul CAM & Pfuhler S (2013) Comet assay in reconstructed 3D human epidermal skin models—investigation of intra- and inter-laboratory reproducibility with coded chemicals. Mutagenesis 28:709–720
Greywe D, Kreutz J, Banduhn N, Krauledat M, Scheel J et al (2012) Applicability and robustness of the hen’s egg test for analysis of micronucleus induction (HET-MN): results from an inter-laboratory trial. Mutat Res 747:118–134
Wolf T, Niehaus-Rolf C, Banduhn N, Eschrich D, Scheel J et al (2008) The hen’s egg test for micronucleus induction (HET-MN): novel analyses with a series of well-characterized substances support the further evaluation of the test system. Mutat Res 650:150–164
Wolf T, Niehaus-Rolf C, Luepke NP (2003) Investigating genotoxic and hematotoxic effects of N-nitrosodimethylamine, N-nitrosodiethylamine and N-nitrosodiethanolamine in the hen’s egg-micronucleus test (HET-MN). Food Chem Toxicol 41:561–573
Basilio da Conceição M, Lovizutto Protti B (2012) Genotoxicity of selected pesticides in the hen’s egg test for micronucleus induction. J Braz Soc Ecotoxicol 7:43–47
Walmsley RM (2008) GADD45a-GFP GreenScreen HC genotoxicity screening assay. Expert Opin Drug Metab Toxicol 4: 827–835
Cheng D, Zhao L, Zhang L, Jiang Y, Tian Y et al (2013) p53 controls hepatitis C virus non-structural protein 5A-mediated downregulation of GADD45alpha expression via the NF-kappaB and PI3K-Akt pathways. J Gen Virol 94:326–335
Hastwell PW, Chai LL, Roberts KJ, Webster TW, Harvey JS et al (2006) High-specificity and high-sensitivity genotoxicity assessment in a human cell line: validation of the GreenScreen HC GADD45a-GFP genotoxicity assay. Mutat Res 607:160–175
Hastwell PW, Webster TW, Tate M, Billinton N, Lynch AM et al (2009) Analysis of 75 marketed pharmaceuticals using the GADD45a-GFP ‘GreenScreen HC’ genotoxicity assay. Mutagenesis 24:455–463
Birrell L, Cahill P, Hughes C, Tate M, Walmsley RM (2010) GADD45a-GFP GreenScreen HC assay results for the ECVAM recommended lists of genotoxic and non-genotoxic chemicals for assessment of new genotoxicity tests. Mutat Res 695:87–95
Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB et al (2012) Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass. Nat Cell Biol 14:1089–1098
Notas G, Alexaki VI, Kampa M, Pelekanou V, Charalampopoulos I et al (2012) APRIL binding to BCMA activates a JNK2-FOXO3-GADD45 pathway and induces a G2/M cell growth arrest in liver cells. J Immunol 189:4748–4758
Billinton N, Hastwell PW, Beerens D, Birrell L, Ellis P et al (2008) Interlaboratory assessment of the GreenScreen HC GADD45a-GFP genotoxicity screening assay: an enabling study for independent validation as an alternative method. Mutat Res 653:23–33
Billinton N, Bruce S, Hansen JR, Hastwell PW, Jagger C et al (2010) A pre-validation transferability study of the GreenScreen HC GADD45a-GFP assay with a metabolic activation system (S9). Mutat Res 700:44–50
Westerink WM, Stevenson JC, Horbach GJ, Schoonen WG (2010) The development of RAD51C, Cystatin A, p53 and Nrf2 luciferase-reporter assays in metabolically competent HepG2 cells for the assessment of mechanism-based genotoxicity and of oxidative stress in the early research phase of drug development. Mutat Res 696:21–40
Shelton P, Jaiswal AK (2013) The transcription factor NF-E2-related factor 2 (Nrf2): a protooncogene? FASEB J 27:414–423
Yamamoto KN, Hirota K, Kono K, Takeda S, Sakamuru S et al (2011) Characterization of environmental chemicals with potential for DNA damage using isogenic DNA repair-deficient chicken DT40 cell lines. Environ Mol Mutagen 52:547–561
Tsamou M, Jennen DG, Claessen SM, Magkoufopoulou C, Kleinjans JC et al (2012) Performance of in vitro gammaH2AX assay in HepG2 cells to predict in vivo genotoxicity. Mutagenesis 27:645–652
Klaunig JE, Kamendulis LM, Hocevar BA (2010) Oxidative stress and oxidative damage in carcinogenesis. Toxicol Pathol 38:96–109
Moriya M (1993) Single-stranded shuttle phagemid for mutagenesis studies in mammalian cells: 8-oxoguanine in DNA induces targeted G.C→T.A transversions in simian kidney cells. Proc Natl Acad Sci U S A 90:1122–1126
Klaunig JE, Shi Y (2009) Assessment of gap junctional intercellular communication. Curr Protoc Toxicol Current protocols in toxicology/editorial board, Mahin D Maines Chapter 2: Unit2 17
Trosko JE, Chang CC, Madhukar BV (1994) The role of modulated gap junctional intercellular communication in epigenetic toxicology. Risk Anal 14:303–312
Kohen R, Nyska A (2002) Oxidation of biological systems: oxidative stress phenomena, antioxidants, redox reactions, and methods for their quantification. Toxicol Pathol 30: 620–650
Circu ML, Aw TY (2012) Glutathione and modulation of cell apoptosis. Biochim Biophys Acta 1823:1767–1777
Kortenkamp A, Olwenn M, Faust M, Evans R, McKinlay R, et al. (2011) State of the Art Assessment of Endocrine Disrupters, Final Report, European Commission, DG Environment http://ec.europa.eu/environment/endocrine/documents/4_SOTA%20EDC%20Final%20Report%20V3%206%20Feb%2012.pdf. 070307/2009/550687/SER/D3
Hynes J, Marroquin LD, Ogurtsov VI, Christiansen KN, Stevens GJ et al (2006) Investigation of drug-induced mitochondrial toxicity using fluorescence-based oxygen-sensitive probes. Toxicol Sci 92:186–200
Hynes J, O’Riordan TC, Zhdanov AV, Uray G, Will Y et al (2009) In vitro analysis of cell metabolism using a long-decay pH-sensitive lanthanide probe and extracellular acidification assay. Anal Biochem 390:21–28
Dalle-Donne I, Rossi R, Giustarini D, Milzani A, Colombo R (2003) Protein carbonyl groups as biomarkers of oxidative stress. Clin Chim Acta 329:23–38
Wen B, Fitch WL (2009) Screening and characterization of reactive metabolites using glutathione ethyl ester in combination with Q-trap mass spectrometry. J Mass Spectrom 44:90–100
Barabasz A, Foley B, Otto JC, Scott A, Rice J (2006) The use of high-content screening for the discovery and characterization of compounds that modulate mitotic index and cell cycle progression by differing mechanisms of action. Assay Drug Dev Technol 4:153–163
Harrigan GG, Yates LA (2006) High-throughput screening, metabolomics and drug discovery. IDrugs 9:188–192
DiPaolo JA, Nelson RL, Donovan PJ (1969) Sarcoma-producing cell lines derived from clones transformed in vitro by benzo[a]pyrene. Science 165:917–918
Isfort RJ, LeBoeuf RA (1996) Application of in vitro cell transformation assays to predict the carcinogenic potential of chemicals. Mutat Res 365:161–173
Isfort RJ, Kerckaert GA, LeBoeuf RA (1996) Comparison of the standard and reduced pH Syrian hamster embryo (SHE) cell in vitro transformation assays in predicting the carcinogenic potential of chemicals. Mutat Res 356:11–63
Matthews EJ, Spalding JW, Tennant RW (1993) Transformation of BALB/c-3T3 cells: V. Transformation responses of 168 chemicals compared with mutagenicity in Salmonella and carcinogenicity in rodent bioassays. Environ Health Perspect 101(Suppl 2):347–482
LeBoeuf RA, Kerckaert KA, Aardema MJ, Isfort RJ (1999) Use of Syrian hamster embryo and BALB/c 3T3 cell transformation for assessing the carcinogenic potential of chemicals. IARC Sci Publ 146:409–425
Vanparys P, Corvi R, Aardema MJ, Gribaldo L, Hayashi M et al (2012) Application of in vitro cell transformation assays in regulatory toxicology for pharmaceuticals, chemicals, food products and cosmetics. Mutat Res 744: 111–116
Corvi R, Aardema MJ, Gribaldo L, Hayashi M, Hoffmann S et al (2012) ECVAM prevalidation study on in vitro cell transformation assays: general outline and conclusions of the study. Mutat Res 744:12–19
OECD DPR No. 31 (2007) Number 31, Detailed Review Paper on cell transformation assays for detection of chemical carcinogens. ENV/JM/MONO(2007)18
ECVAM Recommendation (2012) Recommendation concerning the cell transformation assays using Syrian hamster embryo cells (SHE) and the BALB/c 3T3 mouse fibroblast cell line for in vitro carcinogenicity testing
Draft OECD TG (2012) DRAFT TG Publication: In Vitro Carcinogenicity: Syrian Hamster Embryo (SHE) Cell Transformation Assay, October 2012
Sakai A, Sasaki K, Hayashi K, Muramatsu D, Arai S et al (2011) An international validation study of a Bhas 42 cell transformation assay for the prediction of chemical carcinogenicity. Mutat Res 725:57–77
Ohmori K, Umeda M, Tanaka N, Takagi H, Yoshimura I et al (2005) An inter-laboratory collaborative study by the Non-Genotoxic Carcinogen Study Group in Japan, on a cell transformation assay for tumour promoters using Bhas 42 cells. Altern Lab Anim 33: 619–639
Sasaki K, Mizusawa H, Ishidate M (1988) Isolation and characterization of ras-transfected BALB/3T3 clone showing morphological transformation by 12-O-tetradecanoyl-phorbol-13-acetate. Jpn J Cancer Res 79: 921–930
Sasaki K, Mizusawa H, Ishidate M, Tanaka N (1990) Establishment of a highly reproducible transformation assay of a ras-transfected BALB 3T3 clone by treatment with promoters. Basic Life Sci 52:411–416
Asada S, Sasaki K, Tanaka N, Takeda K, Hayashi M et al (2005) Detection of initiating as well as promoting activity of chemicals by a novel cell transformation assay using v-Ha-ras-transfected BALB/c 3T3 cells (Bhas 42 cells). Mutat Res 588:7–21
Draft ECVAM Recommendation (2013) on the Cell Transformation Assay based on the Bhas 42 cell line. http://ihcp.jrc.ec.europa.eu/our_labs/eurl-ecvam/eurl-ecvam-recommendations/files-bhas/EURL_ECVAM_Recommendation_Bhas-CTA_2013.pdf
Walsh MJ, Bruce SW, Pant K, Carmichael PL, Scott AD et al (2009) Discrimination of a transformation phenotype in Syrian golden hamster embryo (SHE) cells using ATR-FTIR spectroscopy. Toxicology 258:33–38
Urani C, Corvi R, Callegaro G, Stefanini FM (2013) Objective scoring of transformed foci in BALB/c 3T3 cell transformation assay by statistical image descriptors. Toxicol In Vitro 27:1905–1912
Urani C, Stefanini FM, Bussinelli L, Melchioretto P, Crosta GF (2009) Image analysis and automatic classification of transformed foci. J Microsc 234:269–279
Poth A, Kunz S, Heppenheimer A (2007) Bhas cell transformation assay as a predictor of carcinogenicity. ALTEX 14:519–521
Pant K, Sly JE, Bruce SW, Leung C, San RH (2008) Syrian hamster embryo (SHE) cell transformation assay with conditioned media (without X-ray irradiated feeder layer) using 2,4-diaminotoluene, 2,6-diaminotoluene and chloral hydrate. Mutat Res 654:108–113
Ao L, Liu JY, Liu WB, Gao LH, Hu R et al (2010) Comparison of gene expression profiles in BALB/c 3T3 transformed foci exposed to tumor promoting agents. Toxicol In Vitro 24:430–438
Rohrbeck A, Salinas G, Maaser K, Linge J, Salovaara S et al (2010) Toxicogenomics applied to in vitro carcinogenicity testing with Balb/c 3T3 cells revealed a gene signature predictive of chemical carcinogens. Toxicol Sci 118:31–41
Thierbach R, Steinberg P (2009) Automated soft agar assay for the high-throughput screening of anticancer compounds. Anal Biochem 387:318–320
Doktorova TY, Pauwels M, Vinken M, Vanhaecke T, Rogiers V (2012) Opportunities for an alternative integrating testing strategy for carcinogen hazard assessment? Crit Rev Toxicol 42:91–106
Ellinger-Ziegelbauer H, Aubrecht J, Kleinjans JC, Ahr HJ (2009) Application of toxicogenomics to study mechanisms of genotoxicity and carcinogenicity. Toxicol Lett 186:36–44
Waters MD, Jackson M, Lea I (2010) Characterizing and predicting carcinogenicity and mode of action using conventional and toxicogenomics methods. Mutat Res 705: 184–200
Doktorova TY, Yildirimman R, Vinken M, Vilardell M, Vanhaecke T et al (2013) Transcriptomic responses generated by hepatocarcinogens in a battery of liver-based in vitro models. Carcinogenesis 34:1393–1402
Jennings P, Limonciel A, Felice L, Leonard MO (2013) An overview of transcriptional regulation in response to toxicological insult. Arch Toxicol 87:49–72
Tsujimura K, Asamoto M, Suzuki S, Hokaiwado N, Ogawa K et al (2006) Prediction of carcinogenic potential by a toxicogenomic approach using rat hepatoma cells. Cancer Sci 97:1002–1010
Harris AJ, Shaddock JG, Delongchamp R, Dragan Y, Casciano DA (2004) Comparison of Basal gene expression in cultured primary rat hepatocytes and freshly isolated rat hepatocytes. Toxicol Mech Methods 14: 257–270
Jennen DG, Magkoufopoulou C, Ketelslegers HB, van Herwijnen MH, Kleinjans JC et al (2010) Comparison of HepG2 and HepaRG by whole-genome gene expression analysis for the purpose of chemical hazard identification. Toxicol Sci 115:66–79
van Delft JH, van Agen E, van Breda SG, Herwijnen MH, Staal YC et al (2004) Discrimination of genotoxic from non-genotoxic carcinogens by gene expression profiling. Carcinogenesis 25:1265–1276
Guyton KZ, Kyle AD, Aubrecht J, Cogliano VJ, Eastmond DA et al (2009) Improving prediction of chemical carcinogenicity by considering multiple mechanisms and applying toxicogenomic approaches. Mutat Res 681: 230–240
Mathijs K, Brauers KJ, Jennen DG, Lizarraga D, Kleinjans JC et al (2010) Gene expression profiling in primary mouse hepatocytes discriminates true from false-positive genotoxic compounds. Mutagenesis 25:561–568
Hernandez LG, van Benthem J, Johnson GE (2013) A mode-of-action approach for the identification of genotoxic carcinogens. PLoS One 8:e64532
Hernandez LG, Slob W, van Steeg H, van Benthem J (2011) Can carcinogenic potency be predicted from in vivo genotoxicity data?: a meta-analysis of historical data. Environ Mol Mutagen 52:518–528
Benfenati E, Benigni R, Demarini DM, Helma C, Kirkland D et al (2009) Predictive models for carcinogenicity and mutagenicity: frameworks, state-of-the-art, and perspectives. J Environ Sci Health C Environ Carcinog Ecotoxicol Rev 27:57–90
Herceg Z, Lambert MP, van Veldhoven K, Demetriou C, Vineis P et al (2013) Towards incorporating epigenetic mechanisms into carcinogen identification and evaluation. Carcinogenesis 34(9):1955–1967
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Madia, F., Phrakonkham, P., Corvi, R. (2014). Current and Emerging In Vitro Methods for Genotoxicity and Carcinogenicity. In: Bal-Price, A., Jennings, P. (eds) In Vitro Toxicology Systems. Methods in Pharmacology and Toxicology. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-0521-8_14
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DOI: https://doi.org/10.1007/978-1-4939-0521-8_14
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