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Mimicry Technology: A Versatile Tool for Small RNA Suppression

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Part of the book series: Methods in Molecular Biology ((MIMB,volume 1932))

Abstract

A decade ago the discovery of the target mimicry regulatory process on the activity of a mature microRNA (miRNA) enabled for the first time the customized attenuation of miRNA activity in plants. That powerful technology was named MIMIC and was based on engineering the IPS1 long noncoding transcript to become complementary to the miRNA under study. In order to avoid IPS1 degradation, the predicted miRNA-mediated cleavage site was interrupted by three additional nucleotides giving rise to the so-called MIMIC decoy. Since then, MIMIC technology has been used in several plant species and in basic and translational research. We here provide a detailed guide to produce custom-designed MIMIC decoys to facilitate the study of sRNA functions in plants.

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References

  1. Franco-Zorrilla JM, Valli A, Todesco M, Mateos I, Puga MI, Rubio-Somoza I et al (2007) Target mimicry provides a new mechanism for regulation of microRNA activity. Nat Genet 39:1033–1037

    Article  CAS  Google Scholar 

  2. Todesco M, Rubio-Somoza I, Paz-Ares J, Weigel D (2010) A collection of target mimics for comprehensive analysis of microRNA function in Arabidopsis thaliana. PLoS Genet 6:e1001031

    Article  Google Scholar 

  3. Gao F, Wang K, Liu Y, Chen Y, Chen P, Shi Z et al (2015) Blocking miR396 increases rice yield by shaping inflorescence architecture. Nat Plants 2:15196

    Article  Google Scholar 

  4. Knauer S, Holt AL, Rubio-Somoza I, Tucker EJ, Hinze A, Pisch M et al (2013) A protodermal miR394 signal defines a region of stem cell competence in the Arabidopsis shoot meristem. Dev Cell 24:125–132

    Article  CAS  Google Scholar 

  5. Rubio-Somoza I, Weigel D (2013) Coordination of flower maturation by a regulatory circuit of three microRNAs. PLoS Genet 9:e1003374

    Article  CAS  Google Scholar 

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Acknowledgments

The work in the MoRE group is funded by Spanish Ministry of Economy and Competitiveness (I.R-S is supported by BFU-2014-58361-JIN, RYC-2015-19154; L. V-M is supported by BES-2016-076986) and through the “Severo Ochoa Programme for Centres of Excellence in R&D” 2016-2019 (SEV-2015-0533) and the CERCA program from the Generalitat de Catalunya.

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Correspondence to Ignacio Rubio-Somoza .

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Villar-Martin, L.M., Rubio-Somoza, I. (2019). Mimicry Technology: A Versatile Tool for Small RNA Suppression. In: de Folter, S. (eds) Plant MicroRNAs. Methods in Molecular Biology, vol 1932. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-9042-9_18

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  • DOI: https://doi.org/10.1007/978-1-4939-9042-9_18

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  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-9041-2

  • Online ISBN: 978-1-4939-9042-9

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