Unrevealed mosaicism in the next-generation sequencing era Marzena Gajecka Review Open access 19 October 2015 Pages: 513 - 530
GDSL esterase/lipase genes in Brassica rapa L.: genome-wide identification and expression analysis Xiangshu DongHankuil YiYoonkang Hur Original Article 30 September 2015 Pages: 531 - 542
Genome-wide analysis of the IQD gene family in maize Ronghao CaiCongsheng ZhangBeijiu Cheng Original Article 09 October 2015 Pages: 543 - 558
Comparison of skeletal muscle miRNA and mRNA profiles among three pig breeds Xinhua HouYalan YangKui Li Original Article 12 October 2015 Pages: 559 - 573
De novo transcriptome sequencing of Acer palmatum and comprehensive analysis of differentially expressed genes under salt stress in two contrasting genotypes Liping RongQianzhong LiJing Wen Original Article 16 October 2015 Pages: 575 - 586
Identification of microRNA-like RNAs from Curvularia lunata associated with maize leaf spot by bioinformation analysis and deep sequencing Tong LiuJohn HuJumei Hou Original Article 19 October 2015 Pages: 587 - 596
Genome-wide identification and expression analysis of the expansin gene family in tomato Yongen LuLifeng LiuHanxia Li Original Article 24 October 2015 Pages: 597 - 608
Isolation and characterization of cDNAs and genomic DNAs encoding ADP-glucose pyrophosphorylase large and small subunits from sweet potato Yu-Xi ZhouYu-Xiang ChenHai-Yan Wang Original Article 24 October 2015 Pages: 609 - 620
Genome-wide identification and comparative analysis of grafting-responsive mRNA in watermelon grafted onto bottle gourd and squash rootstocks by high-throughput sequencing Na LiuJinghua YangMingfang Zhang Original Article 26 October 2015 Pages: 621 - 633
Genome-wide identification and characterization of the apple (Malus domestica) HECT ubiquitin-protein ligase family and expression analysis of their responsiveness to abiotic stresses Jianing XuShanshan XingXiaoyun Wang Original Article 28 October 2015 Pages: 635 - 646
De novo assembly and characterization of the Welsh onion (Allium fistulosum L.) transcriptome using Illumina technology Xiu-Dong SunXin-Hui YuShi-Qi Liu Original Article 29 October 2015 Pages: 647 - 659
Calcium-dependent protein kinase (CDPK) and CDPK-related kinase (CRK) gene families in tomato: genome-wide identification and functional analyses in disease resistance Ji-Peng WangYou-Ping XuXin-Zhong Cai Original Article 31 October 2015 Pages: 661 - 676
The ABC transporter ABCG29 is involved in H2O2 tolerance and biocontrol traits in the fungus Clonostachys rosea Mukesh DubeyDan Funck JensenMagnus Karlsson Original Article 31 October 2015 Pages: 677 - 686
RNA-seq transcriptome analysis of extensor digitorum longus and soleus muscles in large white pigs Jiayu ZhuXin’e ShiGongshe Yang Original Article 31 October 2015 Pages: 687 - 701
Genomic survey and expression analysis of DNA repair genes in the genus Leptospira Marinalva Martins-PinheiroLuciane Schons-FonsecaRenata M. A. da Costa Original Article 02 November 2015 Pages: 703 - 722
Correlated expression of retrocopies and parental genes in zebrafish Zaixuan ZhongLiandong YangShunping He Original Article 11 November 2015 Pages: 723 - 737
Evolution of the KCS gene family in plants: the history of gene duplication, sub/neofunctionalization and redundancy Hai-Song GuoYan-Mei ZhangJia-Yu Xue Original Article 12 November 2015 Pages: 739 - 752
Large-scale developing of simple sequence repeat markers and probing its correlation with ramie (Boehmeria nivea L.) fiber quality Jie ChenRunqing YuDingxiang Peng Original Article 14 November 2015 Pages: 753 - 761
Genome-wide identification and phylogenetic analysis of plant RNA binding proteins comprising both RNA recognition motifs and contiguous glycine residues Martin LewinskiArmin HallmannDorothee Staiger Original Article 20 November 2015 Pages: 763 - 773
Molecular cytogenetic analysis and genomic organization of major DNA repeats in castor bean (Ricinus communis L.) O. S. AlexandrovG. I. Karlov Original Article 20 November 2015 Pages: 775 - 787
Regulation signature of miR-143 and miR-26 in porcine Salmonella infection identified by binding site enrichment analysis Min YaoWeihua GaoTinghua Huang Original Article 20 November 2015 Pages: 789 - 799
The origin of exon 3 skipping of paternal GLOBOSA pre-mRNA in some Nicotiana tabacum lines correlates with a point mutation of the very last nucleotide of the exon Jaroslav FulnečekRoman Matyášek Original Article 25 November 2015 Pages: 801 - 818
Expression of genes involved in the salicylic acid pathway in type h1 thioredoxin transiently silenced pepper plants during a begomovirus compatible interaction Marianne S. Luna-RiveroCecilia Hernández-ZepedaOscar A. Moreno-Valenzuela Original Article 25 November 2015 Pages: 819 - 830
Whole-transcriptome analysis of mouse adipose tissue in response to short-term caloric restriction Seung-Soo KimKyung-Mi ChoiCheol-Koo Lee Original Article 25 November 2015 Pages: 831 - 847
De novo assembly and characterization of the leaf, bud, and fruit transcriptome from the vulnerable tree Juglans mandshurica for the development of 20 new microsatellite markers using Illumina sequencing Zhuang HuTian ZhangPeng Zhao Original Article 27 November 2015 Pages: 849 - 862
Novel mutations in EVC cause aberrant splicing in Ellis–van Creveld syndrome Lisong ShiChunyan LuoXiaoqian Ye Original Article 30 November 2015 Pages: 863 - 872
Genome wide identification of C1-2i zinc finger proteins and their response to abiotic stress in hexaploid wheat Arnaud CheukMario Houde Original Article 06 December 2015 Pages: 873 - 890
Genetic variations in the PSMA3, PSMA6 and PSMC6 genes are associated with type 1 diabetes in Latvians and with expression level of number of UPS-related and T1DM-susceptible genes in HapMap individuals Tatjana SjaksteNatalia ParamonovaNikolajs Sjakste Original Article 12 December 2015 Pages: 891 - 903
Analysis of pan-genome to identify the core genes and essential genes of Brucella spp. Xiaowen YangYajie LiQingmin Wu Original Article 02 January 2016 Pages: 905 - 912
Identifying novel protein phenotype annotations by hybridizing protein–protein interactions and protein sequence similarities Lei ChenYu-Hang ZhangYu-Dong Cai Original Article 04 January 2016 Pages: 913 - 934
Non-functional plastid ndh gene fragments are present in the nuclear genome of Norway spruce (Picea abies L. Karsch): insights from in silico analysis of nuclear and organellar genomes Sonali Sachin RanadeMaría Rosario García-GilJosep A. Rosselló Original Article 05 January 2016 Pages: 935 - 941
MicroRNA profiling of antler stem cells in potentiated and dormant states and their potential roles in antler regeneration Hengxing BaDatao WangChunyi Li Original Article 06 January 2016 Pages: 943 - 955
Strigolactone pathway genes and plant architecture: association analysis and QTL detection for horticultural traits in chrysanthemum Maik KlieIna MenzThomas Debener Original Article 19 January 2016 Pages: 957 - 969
Identification, duplication, evolution and expression analyses of caleosins in Brassica plants and Arabidopsis subspecies Yue ShenMingzhe LiuMeng Zhang Original Article 19 January 2016 Pages: 971 - 988
Allelic variants of the esterase gene W14/15 differentially regulate overwinter survival in perennial gentian (Gentiana L.) Takashi HikageNoriko YamagishiKen-ichi Tsutsumi Original Article 23 December 2015 Pages: 989 - 997
Selection of reference genes for analysis of stress-responsive genes after challenge with viruses and temperature changes in the silkworm Bombyx mori Huizhen GuoLiang JiangQingyou Xia Methods Paper 05 October 2015 Pages: 999 - 1004
Identification of cell types, tissues and pathways affected by risk loci in psoriasis Yan LinPan ZhaoXianyong Yin Methods Paper 12 November 2015 Pages: 1005 - 1012