Volume 9, issue 3, March 2008

22 articles in this issue

The Amborellagenome: an evolutionary reference for plant biology

Authors (first, second and last of 13)
- Douglas E Soltis
- Victor A Albert
- Pamela S Soltis
- Content type: Correspondence
- Published: 10 March 2008
- Article: 402
Cytoplasmic dynein could be key to understanding neurodegeneration

Authors
- Gareth T Banks
- Elizabeth MC Fisher
- Content type: Minireview
- Published: 28 March 2008
- Article: 214
On the nature of thumbs

Authors
- Günter P Wagner
- Alexander O Vargas
- Content type: Minireview
- Published: 04 March 2008
- Article: 213
Bilateral olfaction: two is better than one for navigation

Authors
- Baranidharan Raman
- Iori Ito
- Mark Stopfer
- Content type: Minireview
- Published: 31 March 2008
- Article: 212
Innate recognition of non-self nucleic acids

Authors
- Hongbo Chi
- Richard A Flavell
- Content type: Review
- Published: 10 March 2008
- Article: 211
Going to the dogs

Authors
- Gregory A Petsko
- Content type: Comment
- Published: 31 March 2008
- Article: 103
Gene expression-based screening for inhibitors of PDGFR signaling

Authors
- Alena A Antipova
- Brent R Stockwell
- Todd R Golub
- Content type: Method
- Open Access
- Published: 01 March 2008
- Article: R47
Functions, structure, and read-through alternative splicing of feline APOBEC3 genes

Authors (first, second and last of 12)
- Carsten Münk
- Thomas Beck
- Naoya Yuhki
- Content type: Research
- Open Access
- Published: 03 March 2008
- Article: R48
Analysis of 142 genes resolves the rapid diversification of the rice genus

Authors (first, second and last of 8)
- Xin-Hui Zou
- Fu-Min Zhang
- Song Ge
- Content type: Research
- Open Access
- Published: 03 March 2008
- Article: R49
Cross-kingdom patterns of alternative splicing and splice recognition

Authors (first, second and last of 4)
- Abigail M McGuire
- Matthew D Pearson
- James E Galagan
- Content type: Research
- Open Access
- Published: 05 March 2008
- Article: R50
Computational identification of obligatorily autocatalytic replicators embedded in metabolic networks

Authors
- Ádám Kun
- Balázs Papp
- Eörs Szathmáry
- Content type: Research
- Open Access
- Published: 10 March 2008
- Article: R51
Functionally important segments in proteins dissected using Gene Ontology and geometric clustering of peptide fragments

Authors (first, second and last of 6)
- Karuppasamy Manikandan
- Debnath Pal
- Guna Seetharaman
- Content type: Method
- Open Access
- Published: 10 March 2008
- Article: R52
Systems biology-defined NF-κB regulons, interacting signal pathways and networks are implicated in the malignant phenotype of head and neck cancer cell lines differing in p53 status

Authors (first, second and last of 8)
- Bin Yan
- Guang Chen
- Zhong Chen
- Content type: Research
- Open Access
- Published: 11 March 2008
- Article: R53
Functional diversification of duplicate genes through subcellular adaptation of encoded proteins

Authors (first, second and last of 4)
- Ana C Marques
- Nicolas Vinckenbosch
- Henrik Kaessmann
- Content type: Research
- Open Access
- Published: 12 March 2008
- Article: R54
Genome assembly forensics: finding the elusive mis-assembly

Authors
- Adam M Phillippy
- Michael C Schatz
- Mihai Pop
- Content type: Software
- Open Access
- Published: 14 March 2008
- Article: R55
DNA signatures for detecting genetic engineering in bacteria

Authors
- Jonathan E Allen
- Shea N Gardner
- Tom R Slezak
- Content type: Method
- Open Access
- Published: 18 March 2008
- Article: R56
Transcriptional analysis of highly syntenic regions between Medicago truncatula and Glycine max using tiling microarrays

Authors (first, second and last of 10)
- Lei Li
- Hang He
- Xing-Wang Deng
- Content type: Research
- Open Access
- Published: 19 March 2008
- Article: R57
Indirect genomic effects on survival from gene expression data

Authors
- Egil Ferkingstad
- Arnoldo Frigessi
- Heidi Lyng
- Content type: Method
- Open Access
- Published: 22 March 2008
- Article: R58
A sequence-based survey of the complex structural organization of tumor genomes

Authors (first, second and last of 26)
- Benjamin J Raphael
- Stanislav Volik
- Colin C Collins
- Content type: Research
- Open Access
- Published: 25 March 2008
- Article: R59
The impact of the neisserial DNA uptake sequences on genome evolution and stability

Authors (first, second and last of 4)
- Todd J Treangen
- Ole Herman Ambur
- Eduardo PC Rocha
- Content type: Research
- Open Access
- Published: 26 March 2008
- Article: R60
Analysis of repetitive DNA distribution patterns in the Tribolium castaneum genome

Authors (first, second and last of 4)
- Suzhi Wang
- Marcé D Lorenzen
- Susan J Brown
- Content type: Research
- Open Access
- Published: 26 March 2008
- Article: R61
Reduced reliance on the trace element selenium during evolution of mammals

Authors
- Alexey V Lobanov
- Dolph L Hatfield
- Vadim N Gladyshev
- Content type: Research
- Open Access
- Published: 31 March 2008
- Article: R62

Volume 9, issue 3, March 2008

The Amborellagenome: an evolutionary reference for plant biology

Cytoplasmic dynein could be key to understanding neurodegeneration

On the nature of thumbs

Bilateral olfaction: two is better than one for navigation

Innate recognition of non-self nucleic acids

Going to the dogs

Gene expression-based screening for inhibitors of PDGFR signaling

Functions, structure, and read-through alternative splicing of feline APOBEC3 genes

Analysis of 142 genes resolves the rapid diversification of the rice genus

Cross-kingdom patterns of alternative splicing and splice recognition

Computational identification of obligatorily autocatalytic replicators embedded in metabolic networks

Functionally important segments in proteins dissected using Gene Ontology and geometric clustering of peptide fragments

Systems biology-defined NF-κB regulons, interacting signal pathways and networks are implicated in the malignant phenotype of head and neck cancer cell lines differing in p53 status

Functional diversification of duplicate genes through subcellular adaptation of encoded proteins

Genome assembly forensics: finding the elusive mis-assembly

DNA signatures for detecting genetic engineering in bacteria

Transcriptional analysis of highly syntenic regions between Medicago truncatula and Glycine max using tiling microarrays

Indirect genomic effects on survival from gene expression data

A sequence-based survey of the complex structural organization of tumor genomes

The impact of the neisserial DNA uptake sequences on genome evolution and stability

Analysis of repetitive DNA distribution patterns in the Tribolium castaneum genome

Reduced reliance on the trace element selenium during evolution of mammals

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