Volume 9, supplement issue 2, September 2008
The BioCreative II - Critical Assessment for Information Extraction in Biology Challenge
- Issue editors
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- Lynette Hirschman
- Martin Krallinger
- John Wilbur
- Alfonso Valencia
14 articles in this issue
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Evaluation of text-mining systems for biology: overview of the Second BioCreative community challenge
Authors (first, second and last of 8)
- Martin Krallinger
- Alexander Morgan
- Alfonso Valencia
- Content type: Research
- Open Access
- Published: 01 September 2008
- Article: S1
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Overview of BioCreative II gene mention recognition
Authors (first, second and last of 34)
- Larry Smith
- Lorraine K Tanabe
- W John Wilbur
- Content type: Research
- Open Access
- Published: 01 September 2008
- Article: S2
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Overview of BioCreative II gene normalization
Authors (first, second and last of 20)
- Alexander A Morgan
- Zhiyong Lu
- Lynette Hirschman
- Content type: Research
- Open Access
- Published: 01 September 2008
- Article: S3
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Overview of the protein-protein interaction annotation extraction task of BioCreative II
Authors (first, second and last of 4)
- Martin Krallinger
- Florian Leitner
- Alfonso Valencia
- Content type: Research
- Open Access
- Published: 01 September 2008
- Article: S4
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MINT and IntAct contribute to the Second BioCreative challenge: serving the text-mining community with high quality molecular interaction data
Authors (first, second and last of 16)
- Andrew Chatr-aryamontri
- Samuel Kerrien
- Henning Hermjakob
- Content type: Research
- Open Access
- Published: 01 September 2008
- Article: S5
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Introducing meta-services for biomedical information extraction
Authors (first, second and last of 32)
- Florian Leitner
- Martin Krallinger
- Alfonso Valencia
- Content type: Software
- Open Access
- Published: 01 September 2008
- Article: S6
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Text mining for biology - the way forward: opinions from leading scientists
Authors (first, second and last of 18)
- Russ B Altman
- Casey M Bergman
- Alfonso Valencia
- Content type: Research
- Open Access
- Published: 01 September 2008
- Article: S7
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Concept recognition for extracting protein interaction relations from biomedical text
Authors (first, second and last of 10)
- William A Baumgartner Jr
- Zhiyong Lu
- Lawrence Hunter
- Content type: Research
- Open Access
- Published: 01 September 2008
- Article: S9
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Automating curation using a natural language processing pipeline
Authors (first, second and last of 8)
- Beatrice Alex
- Claire Grover
- Xinglong Wang
- Content type: Research
- Open Access
- Published: 01 September 2008
- Article: S10
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Uncovering protein interaction in abstracts and text using a novel linear model and word proximity networks
Authors (first, second and last of 8)
- Alaa Abi-Haidar
- Jasleen Kaur
- Luis M Rocha
- Content type: Research
- Open Access
- Published: 01 September 2008
- Article: S11
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Mining physical protein-protein interactions from the literature
Authors (first, second and last of 4)
- Minlie Huang
- Shilin Ding
- Xiaoyan Zhu
- Content type: Research
- Open Access
- Published: 01 September 2008
- Article: S12
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OntoGene in BioCreative II
Authors (first, second and last of 11)
- Fabio Rinaldi
- Thomas Kappeler
- Therese Vachon
- Content type: Research
- Open Access
- Published: 01 September 2008
- Article: S13
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Gene mention normalization and interaction extraction with context models and sentence motifs
Authors (first, second and last of 6)
- Jörg Hakenberg
- Conrad Plake
- Michael Schroeder
- Content type: Research
- Open Access
- Published: 01 September 2008
- Article: S14