Volume 8, issue 12, December 2007

22 articles in this issue

The ins and outs of translation

Authors (first, second and last of 4)
- Jennifer L Clancy
- Marco Nousch
- Thomas Preiss
- Content type: Meeting report
- Published: 07 December 2007
- Article: 321
The reticulons: a family of proteins with diverse functions

Authors
- Yvonne S Yang
- Stephen M Strittmatter
- Content type: Protein family review
- Published: 28 December 2007
- Article: 234
Gene prediction: compare and CONTRAST

Authors
- Paul Flicek
- Content type: Minireview
- Published: 20 December 2007
- Article: 233
Genomic clues to an ancient asexual scandal

Authors
- William R Rice
- Urban Friberg
- Content type: Minireview
- Published: 28 December 2007
- Article: 232
Building on basic metagenomics with complementary technologies

Authors
- Falk Warnecke
- Philip Hugenholtz
- Content type: Review
- Published: 28 December 2007
- Article: 231
Medicine man

Authors
- Gregory A Petsko
- Content type: Comment
- Published: 28 December 2007
- Article: 114
A new computational approach to analyze human protein complexes and predict novel protein interactions

Authors (first, second and last of 7)
- Sara Zanivan
- Ilaria Cascone
- Federico Bussolino
- Content type: Method
- Open Access
- Published: 04 December 2007
- Article: R256
Prediction of synergistic transcription factors by function conservation

Authors
- Zihua Hu
- Boyu Hu
- James F Collins
- Content type: Method
- Open Access
- Published: 05 December 2007
- Article: R257
Broad network-based predictability of Saccharomyces cerevisiaegene loss-of-function phenotypes

Authors
- Kriston L McGary
- Insuk Lee
- Edward M Marcotte
- Content type: Method
- Open Access
- Published: 05 December 2007
- Article: R258
Diversity and evolution of phycobilisomes in marine Synechococcusspp.: a comparative genomics study

Authors (first, second and last of 8)
- Christophe Six
- Jean-Claude Thomas
- Frédéric Partensky
- Content type: Research
- Open Access
- Published: 05 December 2007
- Article: R259
Contribution of telomerase RNA retrotranscription to DNA double-strand break repair during mammalian genome evolution

Authors (first, second and last of 5)
- Solomon G Nergadze
- Marco Andrea Santagostino
- Elena Giulotto
- Content type: Research
- Open Access
- Published: 07 December 2007
- Article: R260
Gene-expression patterns reveal underlying biological processes in Kawasaki disease

Authors (first, second and last of 9)
- Stephen J Popper
- Chisato Shimizu
- David A Relman
- Content type: Research
- Published: 11 December 2007
- Article: R261
Transcriptional profiling of MnSOD-mediated lifespan extension in Drosophilareveals a species-general network of aging and metabolic genes

Authors (first, second and last of 15)
- Christina Curtis
- Gary N Landis
- John Tower
- Content type: Research
- Open Access
- Published: 09 December 2007
- Article: R262
Determining promoter location based on DNA structure first-principles calculations

Authors (first, second and last of 4)
- J Ramon Goñi
- Alberto Pérez
- Modesto Orozco
- Content type: Method
- Open Access
- Published: 11 December 2007
- Article: R263
Evolution of allostery in the cyclic nucleotide binding module

Authors (first, second and last of 7)
- Natarajan Kannan
- Jian Wu
- Susan S Taylor
- Content type: Research
- Open Access
- Published: 12 December 2007
- Article: R264
Quantification of global transcription patterns in prokaryotes using spotted microarrays

Authors (first, second and last of 13)
- Ben Sidders
- Mike Withers
- Neil G Stoker
- Content type: Method
- Open Access
- Published: 13 December 2007
- Article: R265
Direct selection and phage display of a Gram-positive secretome

Authors (first, second and last of 4)
- Dragana Jankovic
- Michael A Collett
- Jasna Rakonjac
- Content type: Method
- Open Access
- Published: 13 December 2007
- Article: R266
Characterization of probiotic Escherichia coliisolates with a novel pan-genome microarray

Authors (first, second and last of 4)
- Hanni Willenbrock
- Peter F Hallin
- David W Ussery
- Content type: Research
- Open Access
- Published: 18 December 2007
- Article: R267
Application of the comprehensive set of heterozygous yeast deletion mutants to elucidate the molecular basis of cellular chromium toxicity

Authors (first, second and last of 10)
- Sara Holland
- Emma Lodwig
- Simon V Avery
- Content type: Research
- Open Access
- Published: 18 December 2007
- Article: R268
CONTRAST: a discriminative, phylogeny-free approach to multiple informant de novogene prediction

Authors (first, second and last of 4)
- Samuel S Gross
- Chuong B Do
- Serafim Batzoglou
- Content type: Method
- Open Access
- Published: 20 December 2007
- Article: R269
Post-translational modifications of histones H3 and H4 associated with the histone methyltransferases Suv39h1 and G9a

Authors (first, second and last of 5)
- Philippe Robin
- Lauriane Fritsch
- Slimane Ait-Si-Ali
- Content type: Method
- Open Access
- Published: 20 December 2007
- Article: R270
Consistent dissection of the protein interaction network by combining global and local metrics

Authors (first, second and last of 4)
- Chunlin Wang
- Chris Ding
- Stephen R Holbrook
- Content type: Method
- Open Access
- Published: 21 December 2007
- Article: R271

Volume 8, issue 12, December 2007

The ins and outs of translation

The reticulons: a family of proteins with diverse functions

Gene prediction: compare and CONTRAST

Genomic clues to an ancient asexual scandal

Building on basic metagenomics with complementary technologies

Medicine man

A new computational approach to analyze human protein complexes and predict novel protein interactions

Prediction of synergistic transcription factors by function conservation

Broad network-based predictability of Saccharomyces cerevisiaegene loss-of-function phenotypes

Diversity and evolution of phycobilisomes in marine Synechococcusspp.: a comparative genomics study

Contribution of telomerase RNA retrotranscription to DNA double-strand break repair during mammalian genome evolution

Gene-expression patterns reveal underlying biological processes in Kawasaki disease

Transcriptional profiling of MnSOD-mediated lifespan extension in Drosophilareveals a species-general network of aging and metabolic genes

Determining promoter location based on DNA structure first-principles calculations

Evolution of allostery in the cyclic nucleotide binding module

Quantification of global transcription patterns in prokaryotes using spotted microarrays

Direct selection and phage display of a Gram-positive secretome

Characterization of probiotic Escherichia coliisolates with a novel pan-genome microarray

Application of the comprehensive set of heterozygous yeast deletion mutants to elucidate the molecular basis of cellular chromium toxicity

CONTRAST: a discriminative, phylogeny-free approach to multiple informant de novogene prediction

Post-translational modifications of histones H3 and H4 associated with the histone methyltransferases Suv39h1 and G9a

Consistent dissection of the protein interaction network by combining global and local metrics

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