Volume 12, issue 10, October 2011
21 articles in this issue
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Moving beyond genome sequencing into personalized genomic medicine: biological and computing challenges
Authors
- David M Kristensen
- Content type: Meeting report
- Published: 24 October 2011
- Article: 308
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Genome-wide association studies in plants: the missing heritability is in the field
Authors
- Benjamin Brachi
- Geoffrey P Morris
- Justin O Borevitz
- Content type: Review
- Published: 28 October 2011
- Article: 232
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The rhomboid protease family: a decade of progress on function and mechanism
Authors
- Sinisa Urban
- Seth W Dickey
- Content type: Protein family review
- Published: 27 October 2011
- Article: 231
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Bacterial epidemiology and biology - lessons from genome sequencing
Authors
- Julian Parkhill
- Brendan W Wren
- Content type: Review
- Published: 24 October 2011
- Article: 230
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Revealing the molecular signatures of host-pathogen interactions
Authors
- Chiea-Chuen Khor
- Martin L Hibberd
- Content type: Review
- Published: 19 October 2011
- Article: 229
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Erratum to: Structure and dynamics of the pangenome of Streptococcus pneumoniae and closely related species
Authors (first, second and last of 18)
- Claudio Donati
- N Luisa Hiller
- Vega Masignani
- Content type: Erratum
- Published: 20 October 2011
- Article: 140
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1, 2, 3: Counting the fingers on a chicken wing
Authors
- Martin D Carkett
- Malcolm PO Logan
- Content type: Research highlight
- Published: 28 October 2011
- Article: 130
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The draft genome and transcriptome of Cannabis sativa
Authors (first, second and last of 7)
- Harm van Bakel
- Jake M Stout
- Jonathan E Page
- Content type: Research
- Open Access
- Published: 20 October 2011
- Article: R102
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The transcriptional landscape of Chlamydia pneumoniae
Authors (first, second and last of 7)
- Marco Albrecht
- Cynthia M Sharma
- Thomas Rudel
- Content type: Research
- Open Access
- Published: 11 October 2011
- Article: R98
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The draft genome of the carcinogenic human liver fluke Clonorchis sinensis
Authors (first, second and last of 19)
- Xiaoyun Wang
- Wenjun Chen
- Xinbing Yu
- Content type: Research
- Open Access
- Published: 24 October 2011
- Article: R107
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Allele-specific copy number analysis of tumor samples with aneuploidy and tumor heterogeneity
Authors (first, second and last of 8)
- Markus Rasmussen
- Magnus Sundström
- Anders Isaksson
- Content type: Method
- Open Access
- Published: 24 October 2011
- Article: R108
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Systematic mapping of two component response regulators to gene targets in a model sulfate reducing bacterium
Authors (first, second and last of 6)
- Lara Rajeev
- Eric G Luning
- Aindrila Mukhopadhyay
- Content type: Research
- Open Access
- Published: 12 October 2011
- Article: R99
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Chromothripsis is a common mechanism driving genomic rearrangements in primary and metastatic colorectal cancer
Authors (first, second and last of 16)
- Wigard P Kloosterman
- Marlous Hoogstraat
- Edwin Cuppen
- Content type: Research
- Open Access
- Published: 19 October 2011
- Article: R103
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SpeCond: a method to detect condition-specific gene expression
Authors (first, second and last of 5)
- Florence MG Cavalli
- Richard Bourgon
- Nicholas M Luscombe
- Content type: Method
- Open Access
- Published: 18 October 2011
- Article: R101
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High-throughput RNA interference screening using pooled shRNA libraries and next generation sequencing
Authors (first, second and last of 16)
- David Sims
- Ana M Mendes-Pereira
- Christopher J Lord
- Content type: Method
- Open Access
- Published: 21 October 2011
- Article: R104
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Integrating diverse genomic data using gene sets
Authors (first, second and last of 4)
- Svitlana Tyekucheva
- Luigi Marchionni
- Giovanni Parmigiani
- Content type: Method
- Open Access
- Published: 21 October 2011
- Article: R105
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Adaptation of Rhizobium leguminosarumto pea, alfalfa and sugar beet rhizospheres investigated by comparative transcriptomics
Authors (first, second and last of 5)
- Vinoy K Ramachandran
- Alison K East
- Philip S Poole
- Content type: Research
- Open Access
- Published: 21 October 2011
- Article: R106
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Variation in global codon usage bias among prokaryotic organisms is associated with their lifestyles
Authors
- Maya Botzman
- Hanah Margalit
- Content type: Research
- Open Access
- Published: 27 October 2011
- Article: R109
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Comparative genomics of the pathogenic ciliate Ichthyophthirius multifiliis, its free-living relatives and a host species provide insights into adoption of a parasitic lifestyle and prospects for disease control
Authors (first, second and last of 29)
- Robert S Coyne
- Linda Hannick
- Theodore G Clark
- Content type: Research
- Open Access
- Published: 17 October 2011
- Article: R100