Volume 11, supplement issue 1, November 2010
Beyond the Genome: The true gene count, human evolution and disease genomics
80 articles in this issue
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Reading and writing genomes
Authors
- George Church
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I2
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Next-generation cancer genomics
Authors
- Elaine R Mardis
- The Washington University Cancer Genome Initiative project team
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I3
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Gene discovery for complex diseases using exomic sequencing: identifying pancreatic cancer susceptibility genes
Authors
- Alison P Klein
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I4
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Personalized oncogenomics
Authors (first, second and last of 36)
- Steven JM Jones
- Janessa Laskin
- Marco A Marra
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I5
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Abstract not submitted for online publication
Authors
- Craig Thompson
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I6
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Large-scale identification of tissue-specific enhancers in vivo
Authors
- Len A Pennacchio
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I7
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Deciphering the genetic basis of common diseases by integrated functional annotation of common and rare variants
Authors (first, second and last of 17)
- Olivier Harismendy
- Gaurav Bhatia
- Kelly A Frazer
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I8
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Abstract not submitted for online publication
Authors
- Michele Clamp
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I9
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Most of the 6.5% - 10% of human DNA bases that are functional now will soon be turned over
Authors
- Chris P Ponting
- Stephen J Meader
- Gerton Lunter
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I10
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The developmental transcriptome of Drosophila melanogaster
Authors
- Brenton Graveley
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I11
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Transcriptomics in a high throughput world
Authors
- Chad Nusbaum
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I12
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Synthetic and sequencing-based approaches to high-throughput genetic analysis
Authors
- Jay Shendue
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I13
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Helicos single molecule sequencing: unique capabilities and importance for molecular diagnostics
Authors
- Patrice M Milos
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I14
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Translational medicine and the human microbiome
Authors
- Rob Knight
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I15
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Abstract not submitted for online publication
Authors
- Stephan Schuster
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I16
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Exploring the human gut microbiome
Authors
- Jun Wang
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I17
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Skin microbiome in health and disease
Authors (first, second and last of 9)
- Julie A Segre
- Elizabeth A Grice
- Maria L Turner
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I18
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The rare biosphere: sorting out fact from fiction
Authors (first, second and last of 5)
- Mitchell L Sogin
- Hilary Morrison
- Sue Huse
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I19
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Genomic variation and adaptation in Africa: implications for human evolutionary history and disease
Authors (first, second and last of 9)
- Sarah A Tishkoff
- Michael Campbell
- Sameer Soi
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I20
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Reconstructing sex chromosome evolution
Authors (first, second and last of 12)
- David C Page
- Jennifer F Hughes
- Helen Skaletsky
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I21
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Mining data from 1000 genomes to identify the causal variant in regions under positive selection
Authors (first, second and last of 10)
- Shari Grossman
- Ilya Shlyakhter
- The 1000 Genomes Project
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I22
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Tracking genes and finding mutations: finding genes for complex traits in the domestic dog (Canis familiaris)
Authors (first, second and last of 22)
- Elaine A Ostrander
- Adam Boyko
- Carlos D Bustamante
- Content type: Invited speaker presentation
- Published: 11 October 2010
- Article: I23
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From identification to validation to gene count
Authors (first, second and last of 15)
- Clara Amid
- Adam Frankish
- Tim Hubbard
- Content type: Selected oral presentation
- Published: 11 October 2010
- Article: O1
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Next-generation sequencing and the era of personal Y genomes
Authors (first, second and last of 6)
- Qasim Ayub
- Luke Jostins
- The 1000 Genomes Consortium
- Content type: Selected oral presentation
- Published: 11 October 2010
- Article: O2
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Genome wide association study SNPs in the human genome diversity project samples: does selection affect unlinked SNPs with shared trait associations?
Authors
- Amanda M Casto
- Marcus W Feldman
- Content type: Selected oral presentation
- Published: 11 October 2010
- Article: O3
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Genome sequencing and analysis of admixed genomes of African and Mexican ancestry: implications for personal ancestry reconstruction and multi-ethnic medical genomics
Authors (first, second and last of 11)
- Francisco M De La Vega
- Katarzyna Bryc
- Carlos D Bustamante
- Content type: Selected oral presentation
- Published: 11 October 2010
- Article: O4
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Defining the human reference protein-coding gene set
Authors (first, second and last of 8)
- Suganthi Balasubramanian
- Lukas Habegger
- Mark Gerstein
- Content type: Selected oral presentation
- Published: 11 October 2010
- Article: O5
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A genomewide ordered-subset linkage analysis for alcohol dependence in African-Americans
Authors (first, second and last of 4)
- Shizhong Han
- Bao-Zhu Yang
- Joel Gelernter
- Content type: Selected oral presentation
- Published: 11 October 2010
- Article: O6
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Statistical methods for comparing the abundances of metabolic pathways in metagenomics
Authors
- Bo Liu
- Mihai Pop
- Content type: Selected oral presentation
- Published: 11 October 2010
- Article: O7
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The genetic structure of south Asian populations as revealed by 650 000 SNPs
Authors (first, second and last of 14)
- Mait Metspalu
- Gyaneshwer Chaubey
- Richard Villems
- Content type: Selected oral presentation
- Published: 11 October 2010
- Article: O8
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Candidate genes and biological processes in de novoCNVs from autistic individuals
Authors (first, second and last of 6)
- Hyun J Noh
- Christian R Marshall
- Caleb Webber
- Content type: Selected oral presentation
- Published: 11 October 2010
- Article: O9
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BIC-seq: a fast algorithm for detection of copy number alterations based on high-throughput sequencing data
Authors (first, second and last of 5)
- Ruibin Xi
- Joe Luquette
- Peter J Park
- Content type: Selected oral presentation
- Published: 11 October 2010
- Article: O10
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Beyond the FANTOM4
Authors (first, second and last of 5)
- Harukazu Suzuki
- Piero Carninci
- Yoshihide Hayashizaki
- Content type: Selected oral presentation
- Published: 11 October 2010
- Article: O11
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Beyond the genome (BTG) is a (PGDB) pathway genome database: HumanCyc
Authors (first, second and last of 7)
- Miles Trupp
- Tomer Altman
- Peter D Karp
- Content type: Selected oral presentation
- Published: 11 October 2010
- Article: O12
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A data analysis and coordination center for the human microbiome project
Authors (first, second and last of 20)
- Jennifer Wortman
- Michelle Giglio
- Owen White
- Content type: Selected oral presentation
- Published: 11 October 2010
- Article: O13
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High-efficiency gene targeting in a human pre-B cell line: towards the human gene knockout project
Authors
- Noritaka Adachi
- Content type: Poster presentation
- Published: 11 October 2010
- Article: P1
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The elastic analysis with galaxy on the cloud
Authors (first, second and last of 5)
- Enis Afgan
- Dannon Baker
- James Taylor
- Content type: Poster presentation
- Published: 11 October 2010
- Article: P2
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Analyzing and minimizing bias in Illumina sequencing libraries
Authors (first, second and last of 10)
- Daniel Aird
- Wei-Shen Chen
- Andreas Gnirke
- Content type: Poster presentation
- Published: 11 October 2010
- Article: P3
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Design and assessment of binary DNA for nanopore sequencing
Authors (first, second and last of 4)
- Pelin Akan
- Henrik Stranneheim
- Joakim Lundeberg
- Content type: Poster presentation
- Published: 11 October 2010
- Article: P4
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A replicative association study of Chromosome 6p21.3 with susceptibility to leprosy in an Indian population - 'a string hypothesis'
Authors (first, second and last of 7)
- Shafat Ali
- Rupali Chopra
- Rameshwar NK Bamezai
- Content type: Poster presentation
- Published: 11 October 2010
- Article: P5
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Ago-associated human usRNAs and other similar small RNAs
Authors (first, second and last of 6)
- Zhihua Li
- Sang Woo Kim
- Bino John
- Content type: Poster presentation
- Published: 11 October 2010
- Article: P6
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The coding potential of the human genome: global compositional properties identify with statistical significance a plethora of new potential coding regions
Authors
- Steven Oden
- Luciano Brocchieri
- Content type: Poster presentation
- Published: 11 October 2010
- Article: P7
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Single cell transcriptome analysis upon MCF-7 breast cancer
Authors (first, second and last of 9)
- Yih-Shien Chiang
- Lock Ying Seng
- Kuo Ping Chiu
- Content type: Poster presentation
- Published: 11 October 2010
- Article: P8
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Evaluation of bacterial ribosomal RNA (rRNA) depletion methods for sequencing microbial community transcriptomes
Authors (first, second and last of 11)
- Dawn Ciulla
- Georgia Giannoukos
- Bruce Birren
- Content type: Poster presentation
- Published: 11 October 2010
- Article: P9
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DNA secondary structures and epigenetic determinants of cancer genome evolution
Authors
- Subhajyoti De
- Franziska Michor
- Content type: Poster presentation
- Published: 11 October 2010
- Article: P10
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CIPRO 2.5: Ciona intestinalis Protein Database - a unique integrated repository of large-scale omics data, bioinformatic analyses, and curated annotation, with ability for user rating and comments
Authors (first, second and last of 21)
- Toshinori Endo
- Keisuke Ueno
- Kazuo Inaba
- Content type: Poster presentation
- Published: 11 October 2010
- Article: P11
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The evolutionary dynamics of protein networks
Authors
- Hai Fang
- Julian Gough
- Content type: Poster presentation
- Published: 11 October 2010
- Article: P12
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Genes and genomes, an imperfect world: comparison of gene annotations of two Bos taurus draft assemblies
Authors
- Liliana Florea
- Alexander Souvorov
- Steven L Salzberg
- Content type: Poster presentation
- Published: 11 October 2010
- Article: P13
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Reprogramming the human cancer cell nucleus
Authors
- John Frenster
- Jeannette Hovsepian
- Content type: Poster presentation
- Published: 11 October 2010
- Article: P14