Volume 8, issue 1, December 2008
134 articles in this issue
-
-
Analysis of the grape MYB R2R3 subfamily reveals expanded wine quality-related clades and conserved gene structure organization across Vitis and Arabidopsis genomes
Authors
- José Tomás Matus
- Felipe Aquea
- Patricio Arce-Johnson
- Content type: Research article
- Open Access
- Published: 22 July 2008
- Article: 83
-
LAMINA: a tool for rapid quantification of leaf size and shape parameters
Authors (first, second and last of 8)
- Max Bylesjö
- Vincent Segura
- Nathaniel R Street
- Content type: Software
- Open Access
- Published: 22 July 2008
- Article: 82
-
Comprehensive analysis of single-repeat R3 MYB proteins in epidermal cell patterning and their transcriptional regulation in Arabidopsis
Authors (first, second and last of 6)
- Shucai Wang
- Leah Hubbard
- Jin-Gui Chen
- Content type: Research article
- Open Access
- Published: 21 July 2008
- Article: 81
-
Quantitative analysis of changes in actin microfilament contribution to cell plate development in plant cytokinesis
Authors (first, second and last of 4)
- Takumi Higaki
- Natsumaro Kutsuna
- Seiichiro Hasezawa
- Content type: Research article
- Open Access
- Published: 17 July 2008
- Article: 80
-
Correlation between amino acid residues converted by RNA editing and functional residues in protein three-dimensional structures in plant organelles
Authors
- Kei Yura
- Mitiko Go
- Content type: Research article
- Open Access
- Published: 16 July 2008
- Article: 79
-
Variation in DNA methylation patterns of grapevine somaclones (Vitis vinifera L.)
Authors (first, second and last of 4)
- Paul Schellenbaum
- Volker Mohler
- Bernard Walter
- Content type: Research article
- Open Access
- Published: 15 July 2008
- Article: 78
-
The Arabidopsis thaliana response regulator ARR22 is a putative AHP phospho-histidine phosphatase expressed in the chalaza of developing seeds
Authors (first, second and last of 9)
- Jakub Horák
- Christopher Grefen
- Klaus Harter
- Content type: Research article
- Open Access
- Published: 15 July 2008
- Article: 77
-
Articulation of three core metabolic processes in Arabidopsis: Fatty acid biosynthesis, leucine catabolism and starch metabolism
Authors (first, second and last of 5)
- Wieslawa I Mentzen
- Jianling Peng
- Eve Syrkin Wurtele
- Content type: Research article
- Open Access
- Published: 11 July 2008
- Article: 76
-
Vv-AMP1, a ripening induced peptide from Vitis vinifera shows strong antifungal activity
Authors
- Abré de Beer
- Melané A Vivier
- Content type: Research article
- Open Access
- Published: 08 July 2008
- Article: 75
-
Head-neck domain of Arabidopsis myosin XI, MYA2, fused with GFP produces F-actin patterns that coincide with fast organelle streaming in different plant cells
Authors
- Nadine Walter
- Carola L Holweg
- Content type: Research article
- Open Access
- Published: 03 July 2008
- Article: 74
-
Transcriptional profiling of the pea shoot apical meristem reveals processes underlying its function and maintenance
Authors (first, second and last of 4)
- Chui E Wong
- Prem L Bhalla
- Mohan B Singh
- Content type: Research article
- Open Access
- Published: 30 June 2008
- Article: 73
-
TriMEDB: A database to integrate transcribed markers and facilitate genetic studies of the tribe Triticeae
Authors (first, second and last of 5)
- Keiichi Mochida
- Daisuke Saisho
- Kazuo Shinozaki
- Content type: Database
- Open Access
- Published: 30 June 2008
- Article: 72
-
Expression of cell wall related genes in basal and ear internodes of silking brown-midrib-3, caffeic acid O-methyltransferase (COMT) down-regulated, and normal maize plants
Authors (first, second and last of 6)
- Sabine Guillaumie
- Deborah Goffner
- Yves Barrière
- Content type: Research article
- Open Access
- Published: 26 June 2008
- Article: 71
-
Complete nucleotide sequence of the Cryptomeria japonicaD. Don. chloroplast genome and comparative chloroplast genomics: diversified genomic structure of coniferous species
Authors (first, second and last of 5)
- Tomonori Hirao
- Atsushi Watanabe
- Katsuhiko Takata
- Content type: Research article
- Open Access
- Published: 23 June 2008
- Article: 70
-
A blackberry (RubusL.) expressed sequence tag library for the development of simple sequence repeat markers
Authors (first, second and last of 9)
- Kim S Lewers
- Chris A Saski
- Jeff P Tomkins
- Content type: Research article
- Open Access
- Published: 20 June 2008
- Article: 69
-
Roles of ArabidopsisWRKY3 and WRKY4 Transcription Factors in Plant Responses to Pathogens
Authors (first, second and last of 5)
- Zhibing Lai
- KM Vinod
- Zhixiang Chen
- Content type: Research article
- Open Access
- Published: 20 June 2008
- Article: 68
-
Synteny conservation between two distantly-related Rosaceae genomes: Prunus (the stone fruits) and Fragaria(the strawberry)
Authors (first, second and last of 4)
- Santiago Vilanova
- Daniel J Sargent
- Amparo Monfort
- Content type: Research article
- Open Access
- Published: 18 June 2008
- Article: 67
-
A physical map of the heterozygous grapevine 'Cabernet Sauvignon' allows mapping candidate genes for disease resistance
Authors (first, second and last of 15)
- Marco Moroldo
- Sophie Paillard
- Anne-Francoise Adam-Blondon
- Content type: Research article
- Open Access
- Published: 13 June 2008
- Article: 66
-
The effects of enhanced methionine synthesis on amino acid and anthocyanin content of potato tubers
Authors
- Gábor Dancs
- Mihály Kondrák
- Zsófia Bánfalvi
- Content type: Research article
- Open Access
- Published: 12 June 2008
- Article: 65
-
Loss of the N-terminal domain of chlorophyllide aoxygenase induces photodamage during greening of Arabidopsis seedlings
Authors
- Akihiro Yamasato
- Ryouichi Tanaka
- Ayumi Tanaka
- Content type: Research article
- Open Access
- Published: 12 June 2008
- Article: 64
-
Rapid and dynamic subcellular reorganization following mechanical stimulation of Arabidopsisepidermal cells mimics responses to fungal and oomycete attack
Authors
- Adrienne R Hardham
- Daigo Takemoto
- Rosemary G White
- Content type: Research article
- Open Access
- Published: 02 June 2008
- Article: 63
-
Oil palm (Elaeis guineensisJacq.) tissue culture ESTs: Identifying genes associated with callogenesis and embryogenesis
Authors (first, second and last of 10)
- Eng-Ti L Low
- Halimah Alias
- Rajinder Singh
- Content type: Research article
- Open Access
- Published: 29 May 2008
- Article: 62
-
Global expression profiling in leaves of free-growing aspen
Authors (first, second and last of 5)
- Andreas Sjödin
- Kirsten Wissel
- Stefan Jansson
- Content type: Research article
- Open Access
- Published: 23 May 2008
- Article: 61
-
Pectic homogalacturonan masks abundant sets of xyloglucan epitopes in plant cell walls
Authors (first, second and last of 8)
- Susan E Marcus
- Yves Verhertbruggen
- J Paul Knox
- Content type: Research article
- Open Access
- Published: 22 May 2008
- Article: 60
-
Comparative chloroplast genomics and phylogenetics of Fagopyrum esculentum ssp. ancestrale– A wild ancestor of cultivated buckwheat
Authors (first, second and last of 4)
- Maria D Logacheva
- Tahir H Samigullin
- Aleksey A Penin
- Content type: Research article
- Open Access
- Published: 20 May 2008
- Article: 59
-
Constitutive Expressor of Pathogenesis-Related Genes5affects cell wall biogenesis and trichome development
Authors (first, second and last of 6)
- Ginger Brininstool
- Remmy Kasili
- John C Larkin
- Content type: Research article
- Open Access
- Published: 16 May 2008
- Article: 58
-
Insight into the early steps of root hair formation revealed by the procuste1 cellulose synthase mutant of Arabidopsis thaliana
Authors (first, second and last of 5)
- Sunil K Singh
- Urs Fischer
- Alan Marchant
- Content type: Research article
- Open Access
- Published: 16 May 2008
- Article: 57
-
Complementation of a phycocyanin-bilin lyase from Synechocystis sp. PCC 6803 with a nucleomorph-encoded open reading frame from the cryptophyte Guillardia theta
Authors (first, second and last of 6)
- Kathrin Bolte
- Oliver Kawach
- Uwe-G Maier
- Content type: Research article
- Open Access
- Published: 16 May 2008
- Article: 56
-
Isolation and characterization of novel microsatellite markers and their application for diversity assessment in cultivated groundnut (Arachis hypogaea)
Authors (first, second and last of 6)
- Luu M Cuc
- Emma S Mace
- Rajeev K Varshney
- Content type: Research article
- Open Access
- Published: 15 May 2008
- Article: 55
-
Control of trichome branching by Chromatin Assembly Factor-1
Authors
- Vivien Exner
- Wilhelm Gruissem
- Lars Hennig
- Content type: Research article
- Open Access
- Published: 13 May 2008
- Article: 54
-
Comparative expression profiling in grape (Vitis vinifera) berries derived from frequency analysis of ESTs and MPSS signatures
Authors (first, second and last of 5)
- Alberto Iandolino
- Kan Nobuta
- Blake C Meyers
- Content type: Research article
- Open Access
- Published: 12 May 2008
- Article: 53
-
A flax fibre proteome: identification of proteins enriched in bast fibres
Authors
- Naomi SC Hotte
- Michael K Deyholos
- Content type: Research article
- Open Access
- Published: 30 April 2008
- Article: 52
-
Development of new genomic microsatellite markers from robusta coffee (Coffea canephoraPierre ex A. Froehner) showing broad cross-species transferability and utility in genetic studies
Authors (first, second and last of 5)
- Prasad Suresh Hendre
- Regur Phanindranath
- Ramesh K Aggarwal
- Content type: Research article
- Open Access
- Published: 30 April 2008
- Article: 51
-
Cupin: A candidate molecular structure for the Nep1-like protein family
Authors (first, second and last of 7)
- Adelmo L Cechin
- Marialva Sinigaglia
- José CM Mombach
- Content type: Research article
- Open Access
- Published: 30 April 2008
- Article: 50
-
The SNF1-type serine-threonine protein kinase SAPK4regulates stress-responsive gene expression in rice
Authors (first, second and last of 4)
- Calliste J Diédhiou
- Olga V Popova
- Dortje Golldack
- Content type: Research article
- Open Access
- Published: 28 April 2008
- Article: 49
-
The redox-sensitive transcription factor Rap2.4a controls nuclear expression of 2-Cys peroxiredoxin A and other chloroplast antioxidant enzymes
Authors (first, second and last of 8)
- Jehad Shaikhali
- Isabelle Heiber
- Margarete Baier
- Content type: Research article
- Open Access
- Published: 26 April 2008
- Article: 48
-
An extensive (co-)expression analysis tool for the cytochrome P450 superfamily in Arabidopsis thaliana
Authors (first, second and last of 6)
- Jürgen Ehlting
- Vincent Sauveplane
- Danièle Werck-Reichhart
- Content type: Research article
- Open Access
- Published: 23 April 2008
- Article: 47
-
Transcriptomic changes induced by acute ozone in resistant and sensitive Medicago truncatulaaccessions
Authors
- Michael C Puckette
- Yuhong Tang
- Ramamurthy Mahalingam
- Content type: Research article
- Open Access
- Published: 23 April 2008
- Article: 46
-
Unexpected complexity of the Aquaporin gene family in the moss Physcomitrella patens
Authors
- Jonas Ã…H Danielson
- Urban Johanson
- Content type: Research article
- Open Access
- Published: 22 April 2008
- Article: 45
-
Characterisation of the tryptophan synthase alpha subunit in maize
Authors (first, second and last of 7)
- Verena Kriechbaumer
- Linda Weigang
- Erich Glawischnig
- Content type: Research article
- Open Access
- Published: 22 April 2008
- Article: 44
-
A spatial dissection of the Arabidopsis floral transcriptome by MPSS
Authors (first, second and last of 8)
- Jason A Peiffer
- Shail Kaushik
- Blake C Meyers
- Content type: Research article
- Open Access
- Published: 21 April 2008
- Article: 43
-
Overexpression of mtDNA-associated AtWhy2 compromises mitochondrial function
Authors (first, second and last of 6)
- Alexandre Maréchal
- Jean-Sébastien Parent
- Normand Brisson
- Content type: Research article
- Open Access
- Published: 18 April 2008
- Article: 42
-
The IBR5 phosphatase promotes Arabidopsis auxin responses through a novel mechanism distinct from TIR1-mediated repressor degradation
Authors
- Lucia C Strader
- Melanie Monroe-Augustus
- Bonnie Bartel
- Content type: Research article
- Open Access
- Published: 18 April 2008
- Article: 41
-
Ornithine-δ-aminotransferase is essential for Arginine Catabolism but not for Proline Biosynthesis
Authors
- Dietmar Funck
- Bettina Stadelhofer
- Wolfgang Koch
- Content type: Research article
- Open Access
- Published: 17 April 2008
- Article: 40
-
Metabolic pathways of the wheat (Triticum aestivum) endosperm amyloplast revealed by proteomics
Authors
- Frances M Dupont
- Content type: Research article
- Open Access
- Published: 17 April 2008
- Article: 39
-
Berry and phenology-related traits in grapevine (Vitis viniferaL.): From Quantitative Trait Loci to underlying genes
Authors (first, second and last of 5)
- Laura Costantini
- Juri Battilana
- Maria Stella Grando
- Content type: Research article
- Open Access
- Published: 17 April 2008
- Article: 38
-
In silicoidentification of conserved microRNAs in large number of diverse plant species
Authors
- Ramanjulu Sunkar
- Guru Jagadeeswaran
- Content type: Research article
- Open Access
- Published: 16 April 2008
- Article: 37
-
Phenotypic instability of Arabidopsis alleles affecting a disease Resistancegene cluster
Authors
- Hankuil Yi
- Eric J Richards
- Content type: Research article
- Open Access
- Published: 14 April 2008
- Article: 36
-
Arabidopsis thaliana outer ovule integument morphogenesis: Ectopic expression of KNAT1reveals a compensation mechanism
Authors
- Elisabeth Truernit
- Jim Haseloff
- Content type: Research article
- Open Access
- Published: 14 April 2008
- Article: 35