Volume 8, issue 1, December 2007
481 articles in this issue
-
-
Single nucleotide polymorphisms (SNPs) are highly conserved in rhesus (Macaca mulatta) and cynomolgus (Macaca fascicularis) macaques
Authors (first, second and last of 4)
- Summer L Street
- Randall C Kyes
- Betsy Ferguson
- Content type: Research article
- Open Access
- Published: 31 December 2007
- Article: 480
-
MacroH2A1 knockdown effects on the Peg3 imprinted domain
Authors
- Jung Ha Choo
- Jeong Do Kim
- Joomyeong Kim
- Content type: Research article
- Open Access
- Published: 31 December 2007
- Article: 479
-
A large-scale proteomic analysis of human embryonic stem cells
Authors (first, second and last of 10)
- Thomas C Schulz
- Anna Maria Swistowska
- Xianmin Zeng
- Content type: Research article
- Open Access
- Published: 27 December 2007
- Article: 478
-
Gene response profiles for Daphnia pulex exposed to the environmental stressor cadmium reveals novel crustacean metallothioneins
Authors (first, second and last of 8)
- Joseph R Shaw
- John K Colbourne
- Joshua W Hamilton
- Content type: Research article
- Open Access
- Published: 21 December 2007
- Article: 477
This is part of 1 collection: -
Microarray analysis of iron deficiency chlorosis in near-isogenic soybean lines
Authors (first, second and last of 8)
- Jamie A O'Rourke
- Dirk V Charlson
- Randy C Shoemaker
- Content type: Research article
- Open Access
- Published: 21 December 2007
- Article: 476
-
Surviving extreme polar winters by desiccation: clues from Arctic springtail (Onychiurus arcticus) EST libraries
Authors (first, second and last of 7)
- Melody S Clark
- Michael AS Thorne
- M Roger Worland
- Content type: Research article
- Open Access
- Published: 21 December 2007
- Article: 475
-
Comparative genomic characterization of citrus-associated Xylella fastidiosa strains
Authors (first, second and last of 9)
- Vivian S da Silva
- Cláudio S Shida
- Regina Costa de Oliveira
- Content type: Research article
- Open Access
- Published: 21 December 2007
- Article: 474
-
The fungus Ustilago maydis and humans share disease-related proteins that are not found in Saccharomyces cerevisiae
Authors
- Martin Münsterkötter
- Gero Steinberg
- Content type: Research article
- Open Access
- Published: 20 December 2007
- Article: 473
-
Functional characterization of two novel 5' untranslated exons reveals a complex regulation of NOD2 protein expression
Authors (first, second and last of 10)
- Philip Rosenstiel
- Klaus Huse
- Stefan Schreiber
- Content type: Research article
- Open Access
- Published: 20 December 2007
- Article: 472
-
AphanoDB: a genomic resource for Aphanomyces pathogens
Authors (first, second and last of 7)
- Mohammed-Amine Madoui
- Elodie Gaulin
- Bernard Dumas
- Content type: Database
- Open Access
- Published: 20 December 2007
- Article: 471
-
Maintenance of transposon-free regions throughout vertebrate evolution
Authors (first, second and last of 4)
- Cas Simons
- Igor V Makunin
- John S Mattick
- Content type: Research article
- Open Access
- Published: 20 December 2007
- Article: 470
-
Rice transposable elements are characterized by various methylation environments in the genome
Authors (first, second and last of 6)
- Miwako Takata
- Akihiro Kiyohara
- Yoshio Sano
- Content type: Research article
- Open Access
- Published: 20 December 2007
- Article: 469
-
Specific elements of the glyoxylate pathway play a significant role in the functional transition of the soybean cotyledon during seedling development
Authors
- Delkin O Gonzalez
- Lila O Vodkin
- Content type: Research article
- Open Access
- Published: 19 December 2007
- Article: 468
-
Identification of chromosomal alpha-proteobacterial small RNAs by comparative genome analysis and detection in Sinorhizobium meliloti strain 1021
Authors (first, second and last of 4)
- Vincent M Ulvé
- Emeric W Sevin
- Frédérique Barloy-Hubler
- Content type: Research article
- Open Access
- Published: 19 December 2007
- Article: 467
-
Serial Analysis of Gene Expression in Plasmodium berghei salivary gland sporozoites
Authors (first, second and last of 10)
- Isabelle Rosinski-Chupin
- Thomas Chertemps
- Patricia Baldacci
- Content type: Research article
- Open Access
- Published: 19 December 2007
- Article: 466
-
Diversity in conserved genes in tomato
Authors (first, second and last of 7)
- Allen Van Deynze
- Kevin Stoffel
- David Francis
- Content type: Research article
- Open Access
- Published: 18 December 2007
- Article: 465
-
Profiling sex-biased gene expression during parthenogenetic reproduction in Daphnia pulex
Authors (first, second and last of 4)
- Brian D Eads
- John K Colbourne
- Justen Andrews
- Content type: Research article
- Open Access
- Published: 18 December 2007
- Article: 464
This is part of 1 collection: -
Mosquito transcriptome changes and filarial worm resistance in Armigeres subalbatus
Authors (first, second and last of 5)
- Matthew T Aliota
- Jeremy F Fuchs
- Bruce M Christensen
- Content type: Research article
- Open Access
- Published: 18 December 2007
- Article: 463
-
Construction and characterization of an expressed sequenced tag library for the mosquito vector Armigeres subalbatus
Authors (first, second and last of 16)
- George F Mayhew
- Lyric C Bartholomay
- Cheng-Chen Chen
- Content type: Research article
- Open Access
- Published: 18 December 2007
- Article: 462
-
Literature Lab: a method of automated literature interrogation to infer biology from microarray analysis
Authors (first, second and last of 8)
- Phillip G Febbo
- Mike G Mulligan
- Stephen C Taylor
- Content type: Software
- Open Access
- Published: 18 December 2007
- Article: 461
-
Denoising inferred functional association networks obtained by gene fusion analysis
Authors (first, second and last of 8)
- Atanas Kamburov
- Leon Goldovsky
- Christos A Ouzounis
- Content type: Research article
- Open Access
- Published: 14 December 2007
- Article: 460
-
Positional bias of general and tissue-specific regulatory motifs in mouse gene promoters
Authors
- Nicolás Bellora
- Domènec Farré
- M Mar AlbÃ
- Content type: Research article
- Open Access
- Published: 13 December 2007
- Article: 459
-
Unravelling the molecular control of calvarial suture fusion in children with craniosynostosis
Authors (first, second and last of 7)
- Anna K Coussens
- Christopher R Wilkinson
- Barry C Powell
- Content type: Research article
- Open Access
- Published: 12 December 2007
- Article: 458
-
In silico and in vitro comparative analysis to select, validate and test SNPs for human identification
Authors (first, second and last of 13)
- Emiliano Giardina
- Ilenia Pietrangeli
- Giuseppe Novelli
- Content type: Research article
- Open Access
- Published: 12 December 2007
- Article: 457
-
Horizontal gene transfer and nucleotide compositional anomaly in large DNA viruses
Authors
- Adam Monier
- Jean-Michel Claverie
- Hiroyuki Ogata
- Content type: Research article
- Open Access
- Published: 10 December 2007
- Article: 456
-
Gene expression and biological processes influenced by deletion of Stat3 in pulmonary type II epithelial cells
Authors (first, second and last of 5)
- Yan Xu
- Machiko Ikegami
- Jeffrey A Whitsett
- Content type: Research article
- Open Access
- Published: 10 December 2007
- Article: 455
-
Variable sexually dimorphic gene expression in laboratory strains of Drosophila melanogaster
Authors (first, second and last of 5)
- Dean A Baker
- Lisa A Meadows
- Steven Russell
- Content type: Research article
- Open Access
- Published: 10 December 2007
- Article: 454
-
The plasticizer butyl benzyl phthalate induces genomic changes in rat mammary gland after neonatal/prepubertal exposure
Authors (first, second and last of 6)
- Raquel Moral
- Richard Wang
- Jose Russo
- Content type: Research article
- Open Access
- Published: 06 December 2007
- Article: 453
-
Gene expression analysis reveals early changes in several molecular pathways in cerebral malaria-susceptible mice versus cerebral malaria-resistant mice
Authors (first, second and last of 10)
- Nicolas F Delahaye
- Nicolas Coltel
- Pascal Rihet
- Content type: Research article
- Open Access
- Published: 06 December 2007
- Article: 452
-
Continuous exposure to Plasmodium results in decreased susceptibility and transcriptomic divergence of the Anopheles gambiae immune system
Authors (first, second and last of 4)
- Ruth Aguilar
- Suchismita Das
- George Dimopoulos
- Content type: Research article
- Open Access
- Published: 05 December 2007
- Article: 451
-
Genome-wide interacting effects of sucrose and herbicide-mediated stress in Arabidopsis thaliana: novel insights into atrazine toxicity and sucrose-induced tolerance
Authors (first, second and last of 9)
- Fanny Ramel
- Cécile Sulmon
- Gwenola Gouesbet
- Content type: Research article
- Open Access
- Published: 05 December 2007
- Article: 450
-
Impact of light on Hypocrea jecorina and the multiple cellular roles of ENVOY in this process
Authors (first, second and last of 5)
- Andrè Schuster
- Christian P Kubicek
- Monika Schmoll
- Content type: Research article
- Open Access
- Published: 04 December 2007
- Article: 449
-
Functional annotation of 19,841 Populus nigra full-length enriched cDNA clones
Authors (first, second and last of 12)
- Tokihiko Nanjo
- Tetsuya Sakurai
- Kenji Shinohara
- Content type: Research article
- Open Access
- Published: 03 December 2007
- Article: 448
-
Discovery of novel alternatively spliced C. elegans transcripts by computational analysis of SAGE data
Authors
- Peter Ruzanov
- Steven J Jones
- Donald L Riddle
- Content type: Research article
- Open Access
- Published: 30 November 2007
- Article: 447
-
Restriction Landmark Genomic Scanning (RLGS) spot identification by second generation virtual RLGS in multiple genomes with multiple enzyme combinations
Authors (first, second and last of 27)
- Dominic J Smiraglia
- Ramakrishnan Kazhiyur-Mannar
- Rephael Wenger
- Content type: Methodology article
- Open Access
- Published: 30 November 2007
- Article: 446
-
Computational prediction and experimental validation of Ciona intestinalis microRNA genes
Authors (first, second and last of 4)
- Trina M Norden-Krichmar
- Janette Holtz
- Terry Gaasterland
- Content type: Research article
- Open Access
- Published: 29 November 2007
- Article: 445
-
Codon-triplet context unveils unique features of the Candida albicans protein coding genome
Authors (first, second and last of 7)
- Gabriela R Moura
- José P Lousado
- Manuel AS Santos
- Content type: Research article
- Open Access
- Published: 29 November 2007
- Article: 444
-
X-chromosome tiling path array detection of copy number variants in patients with chromosome X-linked mental retardation
Authors (first, second and last of 15)
- I Madrigal
- L RodrÃguez-Revenga
- M MilÃ
- Content type: Research article
- Open Access
- Published: 29 November 2007
- Article: 443
-
Comparison of Genomes of Three Xanthomonas oryzae Bacteriophages
Authors (first, second and last of 7)
- Chia-Ni Lee
- Rouh-Mei Hu
- Shu-Fen Weng
- Content type: Research article
- Open Access
- Published: 29 November 2007
- Article: 442
-
TFCONES: A database of vertebrate transcription factor-encoding genes and their associated conserved noncoding elements
Authors (first, second and last of 4)
- Alison P Lee
- Yuchen Yang
- Byrappa Venkatesh
- Content type: Database
- Open Access
- Published: 29 November 2007
- Article: 441
-
Genome-wide changes in expression profile of murine endogenous retroviruses (MuERVs) in distant organs after burn injury
Authors (first, second and last of 6)
- Young-Kwan Lee
- Alex Chew
- Kiho Cho
- Content type: Research article
- Open Access
- Published: 28 November 2007
- Article: 440
-
Pancreatic Expression database: a generic model for the organization, integration and mining of complex cancer datasets
Authors (first, second and last of 8)
- Claude Chelala
- Stephan A Hahn
- Tatjana Crnogorac-Jurcevic
- Content type: Database
- Open Access
- Published: 28 November 2007
- Article: 439
-
Dynamic gene expression in fish muscle during recovery growth induced by a fasting-refeeding schedule
Authors (first, second and last of 6)
- Pierre-Yves Rescan
- Jerome Montfort
- Karine Hugot
- Content type: Research article
- Open Access
- Published: 28 November 2007
- Article: 438
-
Bioinformatic evaluation of L-arginine catabolic pathways in 24 cyanobacteria and transcriptional analysis of genes encoding enzymes of L-arginine catabolism in the cyanobacterium Synechocystis sp. PCC 6803
Authors (first, second and last of 5)
- Sarah Schriek
- Christian Rückert
- Klaus-Peter Michel
- Content type: Research article
- Open Access
- Published: 28 November 2007
- Article: 437
-
Characterization of Smoc-1 uncovers two transcript variants showing differential tissue and age specific expression in Bubalus bubalis
Authors (first, second and last of 5)
- Jyoti Srivastava
- Sanjay Premi
- Sher Ali
- Content type: Research article
- Open Access
- Published: 28 November 2007
- Article: 436
-
Comparative analysis of cyanobacterial superoxide dismutases to discriminate canonical forms
Authors (first, second and last of 7)
- Balakrishnan Priya
- Jagadeesan Premanandh
- Gopalakrishnan Subramanian
- Content type: Research article
- Open Access
- Published: 27 November 2007
- Article: 435
-
The TriTryp Phosphatome: analysis of the protein phosphatase catalytic domains
Authors (first, second and last of 8)
- Rachel Brenchley
- Humera Tariq
- Lydia Tabernero
- Content type: Research article
- Open Access
- Published: 26 November 2007
- Article: 434
-
Differential gene expression profile in pig adipose tissue treated with/without clenbuterol
Authors (first, second and last of 8)
- Jin Zhang
- Qiang He
- Ning Li
- Content type: Research article
- Open Access
- Published: 26 November 2007
- Article: 433
-
Evolutionary consequences of a large duplication event in Trypanosoma brucei: Chromosomes 4 and 8 are partial duplicons
Authors
- Andrew P Jackson
- Content type: Research article
- Open Access
- Published: 23 November 2007
- Article: 432