OntologyWidget – a reusable, embeddable widget for easily locating ontology terms
Authors (first, second and last of 8)
Volume 8, issue 1, December 2007
488 articles in this issue
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Reduced modeling of signal transduction – a modular approach
Authors (first, second and last of 5)
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PathFinder: mining signal transduction pathway segments from protein-protein interaction networks
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EDISA: extracting biclusters from multiple time-series of gene expression profiles
Authors (first, second and last of 5)
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Protein subcellular localization prediction based on compartment-specific features and structure conservation
Authors (first, second and last of 6)
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Gene analogue finder: a GRID solution for finding functionally analogous gene products
Authors (first, second and last of 5)
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BIOSMILE: A semantic role labeling system for biomedical verbs using a maximum-entropy model with automatically generated template features
Authors (first, second and last of 10)
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Optimization of filtering criterion for SEQUEST database searching to improve proteome coverage in shotgun proteomics
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Apollo2Go: a web service adapter for the Apollo genome viewer to enable distributed genome annotation
Authors (first, second and last of 4)
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AUG_hairpin: prediction of a downstream secondary structure influencing the recognition of a translation start site
Authors (first, second and last of 6)
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A statistical method to incorporate biological knowledge for generating testable novel gene regulatory interactions from microarray experiments
Authors (first, second and last of 4)
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Versatile annotation and publication quality visualization of protein complexes using POLYVIEW-3D
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A comprehensive system for evaluation of remote sequence similarity detection
Authors (first, second and last of 5)
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Integrated network reconstruction, visualization and analysis using YANAsquare
Authors (first, second and last of 10)
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Setting up a large set of protein-ligand PDB complexes for the development and validation of knowledge-based docking algorithms
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Analysis of the role of retrotransposition in gene evolution in vertebrates
Authors (first, second and last of 4)
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Automated smoother for the numerical decoupling of dynamics models
Authors (first, second and last of 7)
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Efficacy of different protein descriptors in predicting protein functional families
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Constructing gene co-expression networks and predicting functions of unknown genes by random matrix theory
Authors (first, second and last of 7)
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Annotation and query of tissue microarray data using the NCI Thesaurus
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Identification of putative regulatory upstream ORFs in the yeast genome using heuristics and evolutionary conservation
Authors (first, second and last of 5)
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Quantitative sequence-function relationships in proteins based on gene ontology
Authors (first, second and last of 4)
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Automatic reconstruction of a bacterial regulatory network using Natural Language Processing
Authors (first, second and last of 4)
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An exploration of alternative visualisations of the basic helix-loop-helix protein interaction network
Authors (first, second and last of 5)
