Correction to: Efficient iterative Hi-C scaffolder based on N-best neighbors
Authors (first, second and last of 6)
Volume 22, issue 1, December 2021
521 articles in this issue
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cDNA-detector: detection and removal of cDNA contamination in DNA sequencing libraries
Authors (first, second and last of 5)
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GeneTonic: an R/Bioconductor package for streamlining the interpretation of RNA-seq data
Authors (first, second and last of 4)
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pyKVFinder: an efficient and integrable Python package for biomolecular cavity detection and characterization in data science
Authors (first, second and last of 6)
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\({\text{COSNet}}_i\): ComplexOme-Structural Network Interpreter used to study spatial enrichment in metazoan ribosomes
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Prioritising positively selected variants in whole-genome sequencing data using FineMAV
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Gene prediction of aging-related diseases based on DNN and Mashup
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GENPPI: standalone software for creating protein interaction networks from genomes
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qtlXplorer: an online systems genetics browser in the Eucalyptus Genome Integrative Explorer (EucGenIE)
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Primal-dual for classification with rejection (PD-CR): a novel method for classification and feature selection—an application in metabolomics studies
Authors (first, second and last of 7)
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Computational modelling of chromosomally clustering protein domains in bacteria
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gcMECM: graph clustering of mutual exclusivity of cancer mutations
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JLAN: medical code prediction via joint learning attention networks and denoising mechanism
Authors (first, second and last of 6)
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MCKAT: a multi-dimensional copy number variant kernel association test
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Combining heterogeneous subgroups with graph-structured variable selection priors for Cox regression
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Correction to: Mining a stroke knowledge graph from literature
Authors (first, second and last of 5)
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Optimal dimensionality selection for independent component analysis of transcriptomic data
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Correction to: ncDLRES: a novel method for non‑coding RNAs family prediction based on dynamic LSTM and ResNet
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SpinSPJ: a novel NMR scripting system to implement artificial intelligence and advanced applications
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Five crucial prognostic-related autophagy genes stratified female breast cancer patients aged 40–60 years
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QuickPIV: Efficient 3D particle image velocimetry software applied to quantifying cellular migration during embryogenesis
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Exploring cell-specific miRNA regulation with single-cell miRNA-mRNA co-sequencing data
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BreakNet: detecting deletions using long reads and a deep learning approach
Authors (first, second and last of 7)
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Predicting environmentally responsive transgenerational differential DNA methylated regions (epimutations) in the genome using a hybrid deep-machine learning approach
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Exploring the associations between transcript levels and fluxes in constraint-based models of metabolism
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Bipartite graph-based collaborative matrix factorization method for predicting miRNA-disease associations
Authors (first, second and last of 6)
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A multitask transfer learning framework for the prediction of virus-human protein–protein interactions
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LPI-HyADBS: a hybrid framework for lncRNA-protein interaction prediction integrating feature selection and classification
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NeuRank: learning to rank with neural networks for drug–target interaction prediction
Authors (first, second and last of 4)
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Automatic consistency assurance for literature-based gene ontology annotation
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Randomized quantile residuals for diagnosing zero-inflated generalized linear mixed models with applications to microbiome count data
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Novel deep learning-based solution for identification of prognostic subgroups in liver cancer (Hepatocellular carcinoma)
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GSA: an independent development algorithm for calling copy number and detecting homologous recombination deficiency (HRD) from target capture sequencing
Authors (first, second and last of 9)
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Spliceator: multi-species splice site prediction using convolutional neural networks
Authors (first, second and last of 9)
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HaplotypeTools: a toolkit for accurately identifying recombination and recombinant genotypes
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Mathematical modelling of SigE regulatory network reveals new insights into bistability of mycobacterial stress response
Authors (first, second and last of 6)
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Automated annotation of rare-cell types from single-cell RNA-sequencing data through synthetic oversampling
Authors (first, second and last of 5)
