Volume 7, supplement issue 5, December 2006
APBioNet – Fifth International Conference on Bioinformatics (InCoB2006)
- Issue editors
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- Shoba Ranganathan
- Martti Tammi
- Michael Gribskov
- Tin Wee Tan
22 articles in this issue
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Comparative genomics in cyprinids: common carp ESTs help the annotation of the zebrafish genome
Authors (first, second and last of 5)
- Alan Christoffels
- Richard Bartfai
- Laszlo Orban
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S2
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Evaluation and comparison of mammalian subcellular localization prediction methods
Authors
- Josefine Sprenger
- J Lynn Fink
- Rohan D Teasdale
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S3
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Large-scale analysis of antigenic diversity of T-cell epitopes in dengue virus
Authors (first, second and last of 7)
- Asif M Khan
- AT Heiny
- Vladimir Brusic
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S4
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Projections for fast protein structure retrieval
Authors
- Sourangshu Bhattacharya
- Chiranjib Bhattacharyya
- Nagasuma R Chandra
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S5
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Improving the performance of DomainDiscovery of protein domain boundary assignment using inter-domain linker index
Authors
- Abdur R Sikder
- Albert Y Zomaya
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S6
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Prediction of desmoglein-3 peptides reveals multiple shared T-cell epitopes in HLA DR4- and DR6- associated Pemphigus vulgaris
Authors (first, second and last of 4)
- Joo Chuan Tong
- Tin Wee Tan
- Shoba Ranganathan
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S7
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Computational promoter analysis of mouse, rat and human antimicrobial peptide-coding genes
Authors (first, second and last of 14)
- Manisha Brahmachary
- Christian Schönbach
- Vladimir B Bajic
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S8
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MycoperonDB: a database of computationally identified operons and transcriptional units in Mycobacteria
Authors
- Sarita Ranjan
- Ranjit Kumar Gundu
- Akash Ranjan
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S9
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Trends in life science grid: from computing grid to knowledge grid
Authors
- Akihiko Konagaya
- Content type: Review
- Open Access
- Published: 18 December 2006
- Article: S10
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NERBio: using selected word conjunctions, term normalization, and global patterns to improve biomedical named entity recognition
Authors (first, second and last of 6)
- Richard Tzong-Han Tsai
- Cheng-Lung Sung
- Wen-Lian Hsu
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S11
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Curation of viral genomes: challenges, applications and the way forward
Authors (first, second and last of 6)
- Urmila Kulkarni-Kale
- Shriram G Bhosle
- Ashok S Kolaskar
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S12
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Prediction of the functional class of metal-binding proteins from sequence derived physicochemical properties by support vector machine approach
Authors (first, second and last of 7)
- HH Lin
- LY Han
- YZ Chen
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S13
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SVM-based prediction of caspase substrate cleavage sites
Authors
- Lawrence JK Wee
- Tin Wee Tan
- Shoba Ranganathan
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S14
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Splice site identification using probabilistic parameters and SVM classification
Authors (first, second and last of 4)
- AKMA Baten
- BCH Chang
- Jason Li
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S15
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SPIDer: Saccharomyces protein-protein interaction database
Authors (first, second and last of 9)
- Xiaomei Wu
- Lei Zhu
- Kui Lin
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S16
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Modelling study of dimerization in mammalian defensins
Authors
- Anita Suresh
- Chandra Verma
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S17
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Fly-DPI: database of protein interactomes for D. melanogaster in the approach of systems biology
Authors (first, second and last of 9)
- Chung-Yen Lin
- Shu-Hwa Chen
- Chao A Hsiung
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S18
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An evaluation of human protein-protein interaction data in the public domain
Authors (first, second and last of 8)
- Suresh Mathivanan
- Balamurugan Periaswamy
- Akhilesh Pandey
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S19
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MicroTar: predicting microRNA targets from RNA duplexes
Authors
- Rahul Thadani
- Martti T Tammi
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S20
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Asymptotic behaviour and optimal word size for exact and approximate word matches between random sequences
Authors
- Sylvain Forêt
- Miriam R Kantorovitz
- Conrad J Burden
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S21
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Selecting effective siRNA sequences by using radial basis function network and decision tree learning
Authors
- Shigeru Takasaki
- Yoshihiro Kawamura
- Akihiko Konagaya
- Content type: Proceedings
- Open Access
- Published: 18 December 2006
- Article: S22