Volume 7, issue 1, December 2006
544 articles in this issue
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A method for estimation of elasticities in metabolic networks using steady state and dynamic metabolomics data and linlog kinetics
Authors (first, second and last of 4)
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A minimally invasive multiple marker approach allows highly efficient detection of meningioma tumors
Authors (first, second and last of 6)
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Intensity-based hierarchical Bayes method improves testing for differentially expressed genes in microarray experiments
Authors (first, second and last of 6)
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PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments
Authors (first, second and last of 12)
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iHOPerator: user-scripting a personalized bioinformatics Web, starting with the iHOP website
Authors (first, second and last of 4)
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Effect of various normalization methods on Applied Biosystems expression array system data
Authors (first, second and last of 8)
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Model-driven user interfaces for bioinformatics data resources: regenerating the wheel as an alternative to reinventing it
Authors (first, second and last of 7)
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The NeuARt II system: a viewing tool for neuroanatomical data based on published neuroanatomical atlases
Authors (first, second and last of 4)
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MathDAMP: a package for differential analysis of metabolite profiles
Authors (first, second and last of 8)
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Fast estimation of the difference between two PAM/JTT evolutionary distances in triplets of homologous sequences
Authors (first, second and last of 4)
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Chromosomal patterns of gene expression from microarray data: methodology, validation and clinical relevance in gliomas
Authors (first, second and last of 10)
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iHAP – integrated haplotype analysis pipeline for characterizing the haplotype structure of genes
Authors (first, second and last of 7)
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Cis-motifs upstream of the transcription and translation initiation sites are effectively revealed by their positional disequilibrium in eukaryote genomes using frequency distribution curves
Authors (first, second and last of 4)
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Dynamic variable selection in SNP genotype autocalling from APEX microarray data
Authors (first, second and last of 4)
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An accurate and interpretable model for siRNA efficacy prediction
Authors (first, second and last of 4)
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Integrated siRNA design based on surveying of features associated with high RNAi effectiveness
Authors (first, second and last of 7)
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SigFlux: A novel network feature to evaluate the importance of proteins in signal transduction networks
Authors (first, second and last of 5)
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A hierarchical Naïve Bayes Model for handling sample heterogeneity in classification problems: an application to tissue microarrays
Authors (first, second and last of 5)
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JUICE: a data management system that facilitates the analysis of large volumes of information in an EST project workflow
Authors (first, second and last of 15)
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Statistical analysis of an RNA titration series evaluates microarray precision and sensitivity on a whole-array basis
Authors (first, second and last of 5)
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Connectivity independent protein-structure alignment: a hierarchical approach
Authors (first, second and last of 5)
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Novel methods for secondary structure determination using low wavelength (VUV) circular dichroism spectroscopic data
Authors (first, second and last of 4)
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Visual setup of logical models of signaling and regulatory networks with ProMoT
Authors (first, second and last of 6)
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Using local gene expression similarities to discover regulatory binding site modules
Authors (first, second and last of 6)
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A comparative analysis of the information content in long and short SAGE libraries
Authors (first, second and last of 8)
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A correlated motif approach for finding short linear motifs from protein interaction networks
Authors (first, second and last of 4)
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PathogenMIPer: a tool for the design of molecular inversion probes to detect multiple pathogens
Authors (first, second and last of 5)
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4SALE – A tool for synchronous RNA sequence and secondary structure alignment and editing
Authors (first, second and last of 5)
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cPath: open source software for collecting, storing, and querying biological pathways
Authors (first, second and last of 4)
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methBLAST and methPrimerDB: web-tools for PCR based methylation analysis
Authors (first, second and last of 10)
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DWARF – a data warehouse system for analyzing protein families
Authors (first, second and last of 4)
