Volume 14, supplement issue 15, October 2013

Proceedings of the Eleventh Annual Research in Computational Molecular Biology (RECOMB) Satellite Workshop on Comparative Genomics

Issue editors

Macha Nikolski
Yves Van de Peer

19 articles in this issue

Transcript features alone enable accurate prediction and understanding of gene expression in S. cerevisiae

Authors
- Hadas Zur
- Tamir Tuller
- Content type: Proceedings
- Open Access
- Published: 15 October 2013
- Article: S1
The dynamics of alternative pathways to compensatory substitution

Authors
- Chris A Nasrallah
- Content type: Proceedings
- Open Access
- Published: 15 October 2013
- Article: S2
On the inversion-indel distance

Authors (first, second and last of 4)
- Eyla Willing
- Simone Zaccaria
- Jens Stoye
- Content type: Proceedings
- Open Access
- Published: 15 October 2013
- Article: S3
Lateral gene transfer, rearrangement, reconciliation

Authors (first, second and last of 4)
- Murray Patterson
- Gergely Szöllősi
- Eric Tannier
- Content type: Proceedings
- Open Access
- Published: 15 October 2013
- Article: S4
Gene tree correction guided by orthology

Authors (first, second and last of 5)
- Manuel Lafond
- Magali Semeria
- Nadia El-Mabrouk
- Content type: Proceedings
- Open Access
- Published: 15 October 2013
- Article: S5
Fast algorithms and heuristics for phylogenomics under ILS and hybridization

Authors
- Yun Yu
- Nikola Ristic
- Luay Nakhleh
- Content type: Proceedings
- Open Access
- Published: 15 October 2013
- Article: S6
Practical aliquoting of flowering plant genomes

Authors
- Chunfang Zheng
- David Sankoff
- Content type: Proceedings
- Open Access
- Published: 15 October 2013
- Article: S8
Sorting genomes with rearrangements and segmental duplications through trajectory graphs

Authors
- Mingfu Shao
- Yu Lin
- Bernard Moret
- Content type: Proceedings
- Open Access
- Published: 15 October 2013
- Article: S9
Genome-wide probabilistic reconciliation analysis across vertebrates

Authors (first, second and last of 4)
- Owais Mahmudi
- Joel Sjöstrand
- Jens Lagergren
- Content type: Proceedings
- Open Access
- Published: 15 October 2013
- Article: S10
In silico experimental evolution: a tool to test evolutionary scenarios

Authors (first, second and last of 5)
- Bérénice Batut
- David P Parsons
- Carole Knibbe
- Content type: Proceedings
- Open Access
- Published: 15 October 2013
- Article: S11
Quantitative synteny scoring improves homology inference and partitioning of gene families

Authors (first, second and last of 4)
- Raja Hashim Ali
- Sayyed Auwn Muhammad
- Lars Arvestad
- Content type: Proceedings
- Open Access
- Published: 15 October 2013
- Article: S12
Haploid to diploid alignment for variation calling assessment

Authors
- Veli Mäkinen
- Jani Rahkola
- Content type: Proceedings
- Open Access
- Published: 15 October 2013
- Article: S13
Disentangling homeologous contigs in allo-tetraploid assembly: application to durum wheat

Authors (first, second and last of 8)
- Vincent Ranwez
- Yan Holtz
- Jacques David
- Content type: Proceedings
- Open Access
- Published: 15 October 2013
- Article: S15
Finishing bacterial genome assemblies with Mix

Authors (first, second and last of 8)
- Hayssam Soueidan
- Florence Maurier
- Macha Nikolski
- Content type: Proceedings
- Open Access
- Published: 15 October 2013
- Article: S16
Reconstructing the modular recombination history of Staphylococcus aureus phages

Authors (first, second and last of 4)
- Krister M Swenson
- Paul Guertin
- Anne Bergeron
- Content type: Proceedings
- Open Access
- Published: 15 October 2013
- Article: S17
Mapping proteins in the presence of paralogs using units of coevolution

Authors (first, second and last of 7)
- Mohammed El-Kebir
- Tobias Marschall
- Gunnar W Klau
- Content type: Proceedings
- Open Access
- Published: 15 October 2013
- Article: S18
The dynamics of functional classes of plant genes in rediploidized ancient polyploids

Authors (first, second and last of 9)
- Eric CH Chen
- Carlos Fernando Buen Abad Najar
- David Sankoff
- Content type: Proceedings
- Open Access
- Published: 15 October 2013
- Article: S19
Phase change for the accuracy of the median value in estimating divergence time

Authors
- Arash Jamshidpey
- David Sankoff
- Content type: Proceedings
- Open Access
- Published: 15 October 2013
- Article: S7
Statistics for approximate gene clusters

Authors (first, second and last of 4)
- Katharina Jahn
- Sascha Winter
- Sebastian Böcker
- Content type: Proceedings
- Open Access
- Published: 13 December 2013
- Article: S14

Volume 14, supplement issue 15, October 2013

Proceedings of the Eleventh Annual Research in Computational Molecular Biology (RECOMB) Satellite Workshop on Comparative Genomics

Transcript features alone enable accurate prediction and understanding of gene expression in S. cerevisiae

The dynamics of alternative pathways to compensatory substitution

On the inversion-indel distance

Lateral gene transfer, rearrangement, reconciliation

Gene tree correction guided by orthology

Fast algorithms and heuristics for phylogenomics under ILS and hybridization

Practical aliquoting of flowering plant genomes

Sorting genomes with rearrangements and segmental duplications through trajectory graphs

Genome-wide probabilistic reconciliation analysis across vertebrates

In silico experimental evolution: a tool to test evolutionary scenarios

Quantitative synteny scoring improves homology inference and partitioning of gene families

Haploid to diploid alignment for variation calling assessment

Disentangling homeologous contigs in allo-tetraploid assembly: application to durum wheat

Finishing bacterial genome assemblies with Mix

Reconstructing the modular recombination history of Staphylococcus aureus phages

Mapping proteins in the presence of paralogs using units of coevolution

The dynamics of functional classes of plant genes in rediploidized ancient polyploids

Phase change for the accuracy of the median value in estimating divergence time

Statistics for approximate gene clusters

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Volume 14, supplement issue 15, October 2013

Proceedings of the Eleventh Annual Research in Computational Molecular Biology (RECOMB) Satellite Workshop on Comparative Genomics

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