Volume 11, supplement issue 12, December 2010

Proceedings of the 11th Annual Bioinformatics Open Source Conference (BOSC) 2010

Issue editor

Dahlquist Kam D

13 articles in this issue

An overview of the Hadoop/MapReduce/HBase framework and its current applications in bioinformatics

Authors
- Ronald C Taylor
- Content type: Proceedings
- Open Access
- Published: 21 December 2010
- Article: S1
SeqWare Query Engine: storing and searching sequence data in the cloud

Authors
- Brian D O’Connor
- Barry Merriman
- Stanley F Nelson
- Content type: Proceedings
- Open Access
- Published: 21 December 2010
- Article: S2
Hybrid cloud and cluster computing paradigms for life science applications

Authors (first, second and last of 12)
- Judy Qiu
- Jaliya Ekanayake
- Geoffrey Fox
- Content type: Proceedings
- Open Access
- Published: 21 December 2010
- Article: S3
Galaxy CloudMan: delivering cloud compute clusters

Authors (first, second and last of 6)
- Enis Afgan
- Dannon Baker
- James Taylor
- Content type: Proceedings
- Open Access
- Published: 21 December 2010
- Article: S4
Community-driven computational biology with Debian Linux

Authors (first, second and last of 10)
- Steffen Möller
- Hajo Nils Krabbenhöft
- Charles Plessy
- Content type: Proceedings
- Open Access
- Published: 21 December 2010
- Article: S5
WordSeeker: concurrent bioinformatics software for discovering genome-wide patterns and word-based genomic signatures

Authors (first, second and last of 14)
- Jens Lichtenberg
- Kyle Kurz
- Lonnie R Welch
- Content type: Proceedings
- Open Access
- Published: 21 December 2010
- Article: S6
SADI, SHARE, and the in silico scientific method

Authors (first, second and last of 6)
- Mark D Wilkinson
- Luke McCarthy
- Soroush Samadian
- Content type: Proceedings
- Open Access
- Published: 21 December 2010
- Article: S7
ONTO-ToolKit: enabling bio-ontology engineering via Galaxy

Authors (first, second and last of 5)
- Erick Antezana
- Aravind Venkatesan
- Martin Kuiper
- Content type: Proceedings
- Open Access
- Published: 21 December 2010
- Article: S8
The Musite open-source framework for phosphorylation-site prediction

Authors
- Jianjiong Gao
- Dong Xu
- Content type: Proceedings
- Open Access
- Published: 21 December 2010
- Article: S9
interPopula: a Python API to access the HapMap Project dataset

Authors
- Tiago Antao
- Content type: Proceedings
- Open Access
- Published: 21 December 2010
- Article: S10
An intuitive Python interface for Bioconductor libraries demonstrates the utility of language translators

Authors
- Laurent Gautier
- Content type: Proceedings
- Open Access
- Published: 21 December 2010
- Article: S11
The MOLGENIS toolkit: rapid prototyping of biosoftware at the push of a button

Authors (first, second and last of 15)
- Morris A Swertz
- Martijn Dijkstra
- Helen Parkinson
- Content type: Proceedings
- Open Access
- Published: 21 December 2010
- Article: S12
IPRStats: visualization of the functional potential of an InterProScan run

Authors
- Ryan J Kelly
- David E Vincent
- Iddo Friedberg
- Content type: Proceedings
- Open Access
- Published: 21 December 2010
- Article: S13

Volume 11, supplement issue 12, December 2010

Proceedings of the 11th Annual Bioinformatics Open Source Conference (BOSC) 2010

An overview of the Hadoop/MapReduce/HBase framework and its current applications in bioinformatics

SeqWare Query Engine: storing and searching sequence data in the cloud

Hybrid cloud and cluster computing paradigms for life science applications

Galaxy CloudMan: delivering cloud compute clusters

Community-driven computational biology with Debian Linux

WordSeeker: concurrent bioinformatics software for discovering genome-wide patterns and word-based genomic signatures

SADI, SHARE, and the in silico scientific method

ONTO-ToolKit: enabling bio-ontology engineering via Galaxy

The Musite open-source framework for phosphorylation-site prediction

interPopula: a Python API to access the HapMap Project dataset

An intuitive Python interface for Bioconductor libraries demonstrates the utility of language translators

The MOLGENIS toolkit: rapid prototyping of biosoftware at the push of a button

IPRStats: visualization of the functional potential of an InterProScan run

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Volume 11, supplement issue 12, December 2010

Proceedings of the 11th Annual Bioinformatics Open Source Conference (BOSC) 2010

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Authors (first, second and last of 10)

Authors (first, second and last of 14)

Authors (first, second and last of 6)

Authors (first, second and last of 5)

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