Volume 10, supplement issue 13, October 2009

Highlights from the Fifth International Society for Computational Biology (ISCB) Student Council Symposium

Issue editor

Abeel Thomas

15 articles in this issue

Highlights from the 5^th International Society for Computational Biology Student Council Symposium at the 17^th Annual International Conference on Intelligent Systems for Molecular Biology and the 8^th European Conference on Computational Biology

Authors
- Thomas Abeel
- Jeroen de Ridder
- Lucia Peixoto
- Content type: Introduction
- Open Access
- Published: 19 October 2009
- Article: I1
KIRMES: kernel-based identification of regulatory modules in euchromatic sequences

Authors (first, second and last of 5)
- Sebastian J Schultheiss
- Wolfgang Busch
- Gunnar Rätsch
- Content type: Oral presentation
- Open Access
- Published: 19 October 2009
- Article: O1
Paired-end read length lower bounds for genome re-sequencing

Authors
- Rayan Chikhi
- Dominique Lavenier
- Content type: Oral presentation
- Open Access
- Published: 19 October 2009
- Article: O2
Prediction of super-secondary structure in α-helical and β-barrel transmembrane proteins

Authors
- Van Du Tran
- Philippe Chassignet
- Jean-Marc Steyaert
- Content type: Oral presentation
- Open Access
- Published: 19 October 2009
- Article: O3
Core stemness mechanisms revealed through homology

Authors
- Martina Koeva
- E Camilla Forsberg
- Josh M Stuart
- Content type: Oral presentation
- Open Access
- Published: 19 October 2009
- Article: O4
Functionally informative tag SNP selection using a pareto-optimal approach: playing the game of life

Authors
- Phil Hyoun Lee
- Jae-Yoon Jung
- Hagit Shatkay
- Content type: Oral presentation
- Open Access
- Published: 19 October 2009
- Article: O5
Looking for chromosome spatial organization rules in microarray gene expression data

Authors
- Teresa Szczepińska
- Krzysztof Pawłowski
- Content type: Oral presentation
- Open Access
- Published: 19 October 2009
- Article: O6
Visualization of large microarray experiments with space maps

Authors
- Nils Gehlenborg
- Alvis Brazma
- Content type: Oral presentation
- Open Access
- Published: 19 October 2009
- Article: O7
Probabilistic retrieval and visualization of biologically relevant microarray experiments

Authors (first, second and last of 5)
- José Caldas
- Nils Gehlenborg
- Samuel Kaski
- Content type: Poster presentation
- Open Access
- Published: 19 October 2009
- Article: P1
PAUL: protein structural alignment using integer linear programming and Lagrangian relaxation

Authors (first, second and last of 4)
- Inken Wohlers
- Lars Petzold
- Gunnar W Klau
- Content type: Poster presentation
- Open Access
- Published: 19 October 2009
- Article: P2
A method for validation for clustering of phenotypic gene knockdown profiles using protein-protein interactions information

Authors
- Nikolay Samusik
- Yannis Kalaidzidis
- Marino Zerial
- Content type: Poster presentation
- Open Access
- Published: 19 October 2009
- Article: P3
Phylogenomic inference of functional divergence

Authors (first, second and last of 5)
- Tom A Williams
- Brian E Caffrey
- Mario A Fares
- Content type: Poster presentation
- Open Access
- Published: 19 October 2009
- Article: P4
Transcript quantification with RNA-Seq data

Authors
- Regina Bohnert
- Jonas Behr
- Gunnar Rätsch
- Content type: Poster presentation
- Open Access
- Published: 19 October 2009
- Article: P5
Structure and function analysis of flexible alignment regions in proteins

Authors (first, second and last of 4)
- Walter Pirovano
- Anneke van der Reijden
- Jaap Heringa
- Content type: Poster presentation
- Open Access
- Published: 19 October 2009
- Article: P6
Computational methods to identify novel methyltransferases

Authors
- Tanya C Petrossian
- Steven G Clarke
- Content type: Poster presentation
- Open Access
- Published: 19 October 2009
- Article: P7

Volume 10, supplement issue 13, October 2009

Highlights from the Fifth International Society for Computational Biology (ISCB) Student Council Symposium

Highlights from the 5^th International Society for Computational Biology Student Council Symposium at the 17^th Annual International Conference on Intelligent Systems for Molecular Biology and the 8^th European Conference on Computational Biology

KIRMES: kernel-based identification of regulatory modules in euchromatic sequences

Paired-end read length lower bounds for genome re-sequencing

Prediction of super-secondary structure in α-helical and β-barrel transmembrane proteins

Core stemness mechanisms revealed through homology

Functionally informative tag SNP selection using a pareto-optimal approach: playing the game of life

Looking for chromosome spatial organization rules in microarray gene expression data

Visualization of large microarray experiments with space maps

Probabilistic retrieval and visualization of biologically relevant microarray experiments

PAUL: protein structural alignment using integer linear programming and Lagrangian relaxation

A method for validation for clustering of phenotypic gene knockdown profiles using protein-protein interactions information

Phylogenomic inference of functional divergence

Transcript quantification with RNA-Seq data

Structure and function analysis of flexible alignment regions in proteins

Computational methods to identify novel methyltransferases

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Volume 10, supplement issue 13, October 2009

Highlights from the Fifth International Society for Computational Biology (ISCB) Student Council Symposium

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Authors (first, second and last of 5)

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