Skip to main content
Log in

Effects of Fragmentation of Evergreen Broad-leaved Forests on Genetic Diversity of Ardisia Crenata var. Bicolor (Myrsinaceae)

  • Published:
Biodiversity & Conservation Aims and scope Submit manuscript

Abstract

Due to the long generation times and high densities, dominant tree species usually did not respond consistently with theoretical predictions to the recent fragmentation. Genetic structures of shrubs and herbs, especially those with low densities, may be more sensitive to forest fragmentation. We studied the genetic structure of a self-compatible subshrub, Ardisia crenata var. bicolor (Myrsinaceae) in a recently fragmented landscape. Ten RAPD primers used for analysis generated a total of 76 bands. We found that A. c. var. bicolor had relatively low species-level (P95 = 63.2%; H = 0.106; Shannon diversity index (SI) = 0.246) and within-population diversity (P95 = 5.3−46.1%; H = 0.026−0.175; SI = 0.032−0.253), and significant population differentiation (GST = 0.445). Significantly positive relationships were found between measures of diversity (P95, H and SI) and the log of estimated population size. No significant relationship was observed between Nei's genetic distance and spatial distance of pairwise populations, indicating no isolation-by-distance. Given most species of forests are shrubs and herbs with short generation times, our observation indicated that distinct genetic consequences of recent fragmentation may be expected for quite a number of plant species.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • C.F.E. Bacles A.J. Lowe R.A. Ennos (2004) ArticleTitleGenetic effects of chronic habitat fragmentation on tree species: the case of Sorbus aucuparia in a deforested Scottish landscape Molecular Ecology 13 573–584 Occurrence Handle14871362 Occurrence Handle1:STN:280:DC%2BD2c7gt1Wjsw%3D%3D Occurrence Handle10.1046/j.1365-294X.2004.02093.x

    Article  PubMed  CAS  Google Scholar 

  • G.P. Buchert O.P. Rajora J.V. Hood B.P. Dancik (1997) ArticleTitleEffects of harvesting on genetic diversity in old-growth eastern white pine in OntarioCanada Conservation Biology 11 747–758 Occurrence Handle10.1046/j.1523-1739.1997.96074.x

    Article  Google Scholar 

  • M.A. Cardoso J. Provan W. Powell P.C.G. Ferreira D.E. Oliveira Particlede (1998) ArticleTitleHigh genetic differentiation among remnant populations of the endangered Caesalpinia echinata Lam. (Leguminosae-Caesalpinioideae) Molecular Ecology 7 601–608 Occurrence Handle10.1046/j.1365-294x.1998.00363.x

    Article  Google Scholar 

  • A. Cassel T. Tammaru (2003) ArticleTitleAllozyme variability in central, peripheral and isolated populations of the scarce heath (Coenonympha hero: LepidopteraNymphalidae); implications for conservation Conservation Genetics 4 83–93 Occurrence Handle1:CAS:528:DC%2BD3sXhvFOgtw%3D%3D Occurrence Handle10.1023/A:1021884832122

    Article  CAS  Google Scholar 

  • X.Y. Chen (2000) ArticleTitleEffects of habitat fragmentation on genetic structure of plant populations and implications for the biodiversity conservation Acta Ecologica Sinica 20 884–892

    Google Scholar 

  • X.Y. Chen N. Li L. Shen (2001) ArticleTitleThe mating system of Ardisia crenata var. bicolor (Myrsinaceae), a subtropical understory shrubin Tiantong National Forest Park, Zhejiang Province Acta Phytoecologica Sinica 25 161–165 Occurrence Handle1:CAS:528:DC%2BD3MXkvFKktL8%3D

    CAS  Google Scholar 

  • X.Y. Chen Y.C. Song (1998) ArticleTitleMicrogeographic differentiation in a Cyclobalanopsis glauca poplation in western Huangshan, Anhui Province Journal of Plant Resources Environment 7 10–14

    Google Scholar 

  • X.Y. Chen X.H. Wang Y.C. Song (1997) ArticleTitleGenetic diversity and differentiation of Cyclobalanopsis glauca populations in East China Acta Botanica Sinica 39 149–155

    Google Scholar 

  • C.P. Cheon M.Y. Chung M.G. Chung (2000) ArticleTitleAllozyme and clonal diversity in Korean populations of Ardisia japonica and Ardisia crenata (Myrsinaceae) Israel Journal of Plant Science 48 239–245 Occurrence Handle10.1560/V7M9-RWQM-H0NF-L14V

    Article  Google Scholar 

  • M. Cruzan (2001) ArticleTitlePopulation size and fragmentation thresholds for the maintenance of genetic diversity in the herbaceous endemic Scutellaria montana (Lamiaceae) Evolution 55 1569–1580 Occurrence Handle11580016 Occurrence Handle1:STN:280:DC%2BD3Mrjtlakug%3D%3D

    PubMed  CAS  Google Scholar 

  • J.J. Doyle J.L. Doyle (1987) ArticleTitleA rapid DNA isolation procedure for small quantities of fresh leaf tissue Phytochemical Bulletin 19 11–15

    Google Scholar 

  • N.C. Ellstrand D.R. Elam (1993) ArticleTitlePopulation genetic consequences of small population size: implications for plant conservation Annual Review of Ecology and Systematics 24 217–242 Occurrence Handle10.1146/annurev.es.24.110193.001245

    Article  Google Scholar 

  • P.R. England A.V. Usher R.J. Whelan D.J. Ayre (2002) ArticleTitleMicrosatellite diversity and genetic structure of fragmented populations of the rarefire-dependent shrub Grevillea macleayana Molecular Ecology 11 967–977 Occurrence Handle12030976 Occurrence Handle1:CAS:528:DC%2BD38Xls1arsr4%3D Occurrence Handle10.1046/j.1365-294X.2002.01500.x

    Article  PubMed  CAS  Google Scholar 

  • X.X. Fan L. Shen X. Zhang X.Y. Chen C.X. Fu (2004) ArticleTitleAssessing genetic diversity of Ginkgo biloba L. (Ginkgoaceae) populations from China by RAPD markers Biochemical Genetics 42 269–278 Occurrence Handle15487590 Occurrence Handle1:CAS:528:DC%2BD2cXlsFyisb4%3D Occurrence Handle10.1023/B:BIGI.0000034431.15308.57

    Article  PubMed  CAS  Google Scholar 

  • R. Frankham J.D. Ballou D.A. Briscoe (2002) Introduction to Conservation Genetics Cambridge University Press Cambridge

    Google Scholar 

  • P. Hall S. Walker K. Bawa (1996) ArticleTitleEffect of forest fragmentation on genetic diversity and mating system in a tropical treePithecellobium elegans Conservation Biology 10 757–768 Occurrence Handle10.1046/j.1523-1739.1996.10030757.x

    Article  Google Scholar 

  • L.F. Keller D.M. Waller (2002) ArticleTitleInbreeding effects in wild populations Trends in Ecology and Evolution 17 230–241 Occurrence Handle10.1016/S0169-5347(02)02489-8

    Article  Google Scholar 

  • U. Landergott R. Holderegger G. Kozlowski J. Schneller (2001) ArticleTitleHistorical bottlenecks decrease genetic diversity in natural populations of Dryopteris cristata Heredity 87 344–355 Occurrence Handle11737281 Occurrence Handle1:CAS:528:DC%2BD38XitFensA%3D%3D Occurrence Handle10.1046/j.1365-2540.2001.00912.x

    Article  PubMed  CAS  Google Scholar 

  • R.C. Lewontin (1972) ArticleTitleThe apportionment of human diversity Evolutionary Biology 6 381–398

    Google Scholar 

  • Y.-Y. Li X.-Y. Chen X. Zhang T.-Y. Wu H.-P. Lu Y.-W. Cai (2005) ArticleTitleGenetic differences between wild and artificial populations of Metasequoia glyptostroboides Hu et Cheng (Taxodiaceae): Implications for species recovery Conservation Biology 19 224–231 Occurrence Handle10.1111/j.1523-1739.2005.00025.x

    Article  Google Scholar 

  • J. Lienert M. Fischer J. Schneller M. Diemer (2002) ArticleTitleIsozyme variability of the wetland specialist Swertia perennis (Gentianaceae) in relation to habitat sizeisolation, and plant fitness American Journal of Botany 89 801–811 Occurrence Handle1:CAS:528:DC%2BD3sXjvFOlug%3D%3D Occurrence Handle10.1093/aob/mcf159

    Article  CAS  Google Scholar 

  • M. Lynch B.G. Milligan (1994) ArticleTitleAnalysis of population genetic structure with RAPD markers Molecular Ecology 3 91–99 Occurrence Handle8019690 Occurrence Handle1:STN:280:ByuB1M%2Fms1E%3D

    PubMed  CAS  Google Scholar 

  • N. Mantel (1967) ArticleTitleThe detection of disease clustering and a generalized regression approach Cancer Research 27 209–220 Occurrence Handle6018555 Occurrence Handle1:STN:280:CCiD1MzgsVY%3D

    PubMed  CAS  Google Scholar 

  • M.P. Miller (1997) Tools for population genetic analyses (TFPGA) v1.3: A windows program for the analysis of allozyme and molecular genetic data Department of Biological Sciences Northern Arizona University Flagstaff

    Google Scholar 

  • C.W. Morden W. Loeffler (1999) ArticleTitleFragmentation and genetic differentiation among subpopulations of the endangered Hawaiian mint Haplostachys haplostachya (Lamiaceae) Molecular Ecology 8 617–625 Occurrence Handle10.1046/j.1365-294x.1999.00601.x

    Article  Google Scholar 

  • A.B. Morris R.S. Baucom M.B. Cruzan (2002) ArticleTitleStratified analysis of the soil seed bank in the cedar glade endemic Astragalus bibullatus: Evidence for historical changes in genetic structure American Journal of Botany 89 29–36

    Google Scholar 

  • H. Nybom (2004) ArticleTitleComparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants Molecular Ecology 13 1143–1155 Occurrence Handle15078452 Occurrence Handle1:CAS:528:DC%2BD2cXktl2rsL0%3D Occurrence Handle10.1111/j.1365-294X.2004.02141.x

    Article  PubMed  CAS  Google Scholar 

  • H. Nybom I.V. Bartish (2000) ArticleTitleEffects of life history traits and sampling strategies on genetic diversity estimates obtained with RAPD markers in plants Perspectives in Plant Ecology, Evolution and Systematics 3/2 93–114 Occurrence Handle10.1078/1433-8319-00006

    Article  Google Scholar 

  • L.E.L. Raijmann N.C. Leeuwen ParticleVan R. Kersten J.R.B. Oostermeijer H.C.M. Den Nijs S.B.J. Menken (1994) ArticleTitleAlleleic variation and outcrossing rate in relation to population size in Gentiana pneumonanthe L Conservation Biology 8 1014–1026 Occurrence Handle10.1046/j.1523-1739.1994.08041014.x

    Article  Google Scholar 

  • K. Ritland (1990) ArticleTitleA series of FORTRAN computer programs for estimating plant mating systems Journal of Heredity 81 235–237

    Google Scholar 

  • D.A. Saunders R.J. Hobbs C.R. Margules (1991) ArticleTitleBiological consequences of ecosystem fragmentation: A review Conservation Biology 5 18–32 Occurrence Handle10.1111/j.1523-1739.1991.tb00384.x

    Article  Google Scholar 

  • Y.C. Song X.R. Wang (1995) Vegetation and Flora of Tiantong National Forest Park, Zhejiang Province Shanghai Scientific Documentary Press Shanghai

    Google Scholar 

  • S.A. Tansley C.R. Brown (2000) ArticleTitleRAPD variation in the rare and endangered Leucadendron elimense (Proteaceae): implications for their conservation Biological Conservation 95 39–48 Occurrence Handle10.1016/S0006-3207(00)00015-X

    Article  Google Scholar 

  • T. Tyler (2002) ArticleTitleLarge-scale geographic patterns of genetic variation in Melica nutansa widespread Eurasian woodland grass Plant Syst. Evol. 236 73–87 Occurrence Handle1:CAS:528:DC%2BD38XpsVSisLg%3D Occurrence Handle10.1007/s00606-002-0235-8

    Article  CAS  Google Scholar 

  • F. Rossum ParticleVan S.C. Sousa ParticleDe L. Triest (2004) ArticleTitleGenetic consequences of habitat fragmentation in an agricultural landscape on the common Primula verisand comparison with its rare congenerP. vulgaris Conservation Genetics 5 231–245 Occurrence Handle10.1023/B:COGE.0000030007.85492.70

    Article  Google Scholar 

  • S. Vandewoestijne M. Baguette (2002) ArticleTitleThe genetic structure of endangered populations in the Cranberry Fritillary, Boloria aquilonaris (LepidopteraNymphalidae): RAPDs vs allozymes Heredity 89 439–445 Occurrence Handle12466986 Occurrence Handle1:CAS:528:DC%2BD38Xpt1Witrw%3D Occurrence Handle10.1038/sj.hdy.6800161

    Article  PubMed  CAS  Google Scholar 

  • F.C. Yeh R.C. Yang T. Boyle (1999) Popgene Version 1.31: Microsoft Window-Based Freeware for Population Genetic Analysis Department of Renewable Resources, University of Alberta Edmonton, AB Canada

    Google Scholar 

  • A. Young T. Boyle T. Brown (1996) ArticleTitleThe population genetic consequences of habitat fragmentation for plants Trends in Ecology and Evolution 11 413–418 Occurrence Handle10.1016/0169-5347(96)10045-8

    Article  Google Scholar 

  • A. Young H.G. Merriam S.I. Warwick (1993) ArticleTitleThe effects of forest fragmentation on genetic variation in Acer saccharum Marsh. (sugar maple) populations Heredity 71 277–289

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Xiao-Yong Chen.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Zhao, AL., Chen, XY., Zhang, X. et al. Effects of Fragmentation of Evergreen Broad-leaved Forests on Genetic Diversity of Ardisia Crenata var. Bicolor (Myrsinaceae). Biodivers Conserv 15, 1339–1351 (2006). https://doi.org/10.1007/s10531-005-4875-1

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10531-005-4875-1

Keywords

Navigation