Skip to main content

Endophytic Microbes as a Novel Source for Producing Anticancer Compounds as Multidrug Resistance Modulators

  • Chapter
  • First Online:
Book cover Anticancer Plants: Natural Products and Biotechnological Implements

Abstract

Endophytes are a range of microorganisms which inhabit the plant tissues, establishing an association with their hosts during a period for nearly or all their life without causing any apparent damage. It is known that some of these microorganisms have the potential to produce a diverse range of molecules that may be a reservoir of pharmaceutical drugs with anticancer activity. Cancer is a major trouble public health in all countries of the world, and this disease has higher mortality rate. Cancer is a name given to a complex disease, which is distinguished by the development and expansion of untypical cells and can lead to death. Nowadays the multidrug resistance (MDR) in cancer chemotherapy, remains a challenge to human and animal health around the world, which in several cases makes treatment inefficient. As a result, an increased number of strategies have been encouraged in search of MDR modulators (drugs that overcome MDR capacity) from various natural resources including endophyte-derived compounds. Thus, the aim of this chapter is to present the current status of several strategies adopted to promote the identification of some of these bioactive endophyte-derived compounds such as flavonoids, coumarins, polysaccharides, and β-glucans and to demonstrate their pharmaceutical potential as MDR modulators.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  • Abarrategi A, Tornin J, Martinez-Cruzado L, Hamilton A, Martinez-Campos E, Rodrigo JP, González MV, Baldini N, Garcia-Castro J, Rene Rodriguez R (2016) Osteosarcoma: cells-of-origin, cancer stem cells, and targeted therapies. Stem Cells Int 2016:3631764. https://doi.org/10.1155/2016/3631764

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Abdallah HM, Al-Abd AM, El-Dine RS, El-Halawany AM (2015) P-glycoprotein inhibitors of natural origin as potential tumor chemo-sensitizers: a review. J Adv Res 6:45–62

    Article  PubMed  CAS  Google Scholar 

  • Abdolmaleki A, Ghasemi JB (2017) Dual-acting of hybrid compounds – a new dawn in the discovery of multitarget drugs: lead generation approaches. Curr Top Med Chem 17:1096–1114

    Article  PubMed  CAS  Google Scholar 

  • Abeyruwan S, Vempati UD, Küçük-McGinty H, Visser U, Koleti A, Mir A, Sakurai K, Chung C, Bittker JA, Clemons PA, Brudz S, Siripala A, Morales AJ, Romacker M, Twomey D, Bureeva S, Lemmon V, Schürer SC (2014) Evolving BioAssay Ontology (BAO): modularization, integration and applications. J Biomed Semantics 3:S5. https://doi.org/10.1186/2041-1480-5-S1-S5

    Article  Google Scholar 

  • Aguiar-Pulido V, Huang W, Suarez-Ulloa V, Cickovski T, Mathee K, Narasimhan G (2016) Metagenomics, metatranscriptomics, and metabolomics approaches for microbiome analysis. Evol Bioinform 12:5–16

    Google Scholar 

  • Ahemad M, Kibret M (2014) Mechanisms and applications of plant growth promoting rhizobacteria: a current perspective. J King Saud Univ Sci 26:1–20

    Article  Google Scholar 

  • Ahlbom A, Feychting M, Gren A Kheifets L, Savitz DA, Swerdlow AJ (2009) Epidemiologic evidence on mobile phones and tumor risk: a review. Epidemiology 20:639–652

    Article  PubMed  Google Scholar 

  • Ahmad J, Akhter S, Nigel H, Kamal GMM, Midoux P, Pichon C (2016) Engineered nanoparticles against MDR in cancer: the state of the art and its prospective. Curr Pharm Des 22:4360–4373

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Ahn K (2017) The worldwide trend of using botanical drugs and strategies for developing global drugs. BMB Rep 50:111–116

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Akhtar MS, Panwar J, Abdullah SNA, Siddiqui Y, Swamy MK, Ashkani S (2015) Biocontrol of plant parasitic nematodes by fungi: efficacy and control strategies. In: Meghvanshi MK, Varma A (eds) Organic amendments and soil suppressiveness in plant disease management, Soil biology, vol 46. Springer, Cham, pp 219–247

    Chapter  Google Scholar 

  • Alain K, Querellou J (2009) Cultivating the uncultured: limits, advances and future challenges. Extremophiles 13:583–594

    Article  PubMed  Google Scholar 

  • Aller SG, Yu J, Ward A, Weng Y, Chittaboina S, Zhuo R, Harrell PM, Trinh YT, Zhang Q, Urbatsch IL, Chang G (2009) Structure of P-glycoprotein reveals a molecular basis for poly-specific drug binding. Science 323:1718–1722

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Al-Massarani AM (2014) Phytochemical and biological properties of sesquiterpene constituents from the marine red seaweed Laurencia: a review. Nat Prod Chem Res 2:147. https://doi.org/10.4172/2329-6836.1000147

    Article  CAS  Google Scholar 

  • Al-Quteimat OM, Al-Badaineh MA (2014) Intraperitoneal chemotherapy: rationale, applications, and limitations. J Oncol Pharm Pract 20:369–380. https://doi.org/10.1177/1078155213506244

    Article  PubMed  CAS  Google Scholar 

  • Altieri F, Grillo C, Maceroni M, Chichiarelli S (2008) DNA damage and repair: from molecular mechanisms to health implications. Antioxid Redox Signal 10:891–938

    Article  PubMed  CAS  Google Scholar 

  • Aly AH, Debbab A, Kjer J, Proksch P (2010) Fungal endophytes from higher plants: a prolific source of phytochemicals and other bioactive natural products. Fungal Divers 41:1–16

    Article  Google Scholar 

  • Aly AH, Debbab A, Proksch P (2011) Fungal endophytes: unique plant inhabitants with great promises. Appl Microbiol Biotechnol 90:829–1845. https://doi.org/10.1007/s00253-011-3270-y

    Article  CAS  Google Scholar 

  • Aly AH, Debbab A, Proksch P (2013) Fungal endophytes-secret producers of bioactive plant metabolites. Pharmazie 68:499–505

    PubMed  CAS  Google Scholar 

  • Amin ML (2013) P-glycoprotein inhibition for optimal drug delivery. Drug Target Insights 13:727–734

    Google Scholar 

  • Andreote FD, Gumiere T, Durrer A (2014) Exploring interactions of plant microbiomes. Sci Agric 71:528–539

    Article  Google Scholar 

  • Andrews JH, Harris RF (2000) The ecology and biogeography of microorganisms of plant surfaces. Annu Rev Phytopathol 38:145–180

    Article  PubMed  Google Scholar 

  • Antipova TV, Zhelifonova VP, Baskunov BP, Ozerskaia SM, Ivanushkina NE, Kozlovskiĭ AG (2011) New producers of biologically active compounds-fungal strains of the genus Penicillium isolated from permafrost. Prikl Biokhim Mikrobiol 47:318–323

    PubMed  CAS  Google Scholar 

  • Arai M (2016) Exploring new drug targets through the identification of target molecules of bioactive natural products. Yakugaku Zasshi 136:669–676

    Article  PubMed  CAS  Google Scholar 

  • Arias JL (2008) Novel strategies to improve the anticancer action of 5-fluorouracil by using drug delivery systems. Molecules 13:2340–2369

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Armitage EG, Barbas C (2014) Metabolomics in cancer biomarker discovery: current trends and future perspectives. J Pharm Biomed Anal 87:218–228

    Article  CAS  Google Scholar 

  • Arnold AE (2005) Diversity and ecology of fungal endophytes in tropical forests. In: Deshmukh D (ed) Current trends in mycological research. Oxford & IBH Publishing, New Delhi, pp 49–68

    Google Scholar 

  • Atkins C, Evans CW, White EL, Noah JW (2012) Screening methods for influenza antiviral drug discovery. Expert Opin Drug Discovery 7:429–438

    Article  CAS  Google Scholar 

  • Au JL, Lu Z, Wientjes MG (2015) Versatility of particulate carriers: development of pharmacodynamically optimized drug-loaded microparticles for the treatment of peritoneal cancer. AAPS J 17:1065–1079

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Avinash J, Vinay S, Jha K, Das D, Goutham BS, Kumar G (2016) The unexplored anticaries potential of shiitake mushroom. Pharmacogn Rev 10:100–104

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Backshall A, Sharma R, Clarke SJ, Keun HC (2011) Pharmacometabonomic profiling as a predictor of toxicity in patients with inoperable colorectal cancer treated with capecitabine. Clin Cancer Res 17:3019–3028

    Article  PubMed  CAS  Google Scholar 

  • Baldan E, Nigris S, Populin F, Zottini M, Squartini A, Baldan B (2014) Identification of culturable bacterial endophyte community isolated from tissues of Vitis vinifera “Gloria”. Plant Biosyst 148:508–516

    Article  Google Scholar 

  • Balderud LZ, Murray D, Larsson N, Vempati U, Schürer SC, Bjäreland M, Engkvist O (2015) Using the BioAssay Ontology for analyzing high-throughput screening data. J Biomol Screen 20:402–415

    Article  CAS  Google Scholar 

  • Balmith M, Faya M, Soliman ME (2017) Ebola virus: a gap in drug design and discovery – experimental and computational perspective. Chem Biol Drug Des 89:297–308

    Article  PubMed  CAS  Google Scholar 

  • Barot KP, Jain SV, Kremer L, Singh S, Ghate MD (2015) Recent advances and therapeutic journey of coumarins: current status and perspectives. Med Chem Res 24:2771–2798

    Article  CAS  Google Scholar 

  • Bates S, Kang M, Meadows B, Bakke S, Choyke P, Merino M, Goldspiel B, Chico I, Smith T, Chen C, Robey R, Bergan R, Figg WD, Fojo T (2001) A phase I study of infusional vinblastine in combination with the P-glycoprotein antagonist PSC 833 (valspodar). Cancer 92:1577–1590

    Article  PubMed  CAS  Google Scholar 

  • Bhardwaj A, Agrawal P (2014) A review fungal endophytes: as a storehouse of bioactive compound. World. J Pharm Pharm Sci 3:228–237

    Google Scholar 

  • Bianchini LF, Arruda MFC, Vieira SR, Campelo PMS, Grégio AMT, Rosa EAR (2015) Microbial biotransformation to obtain new antifungals. Front Microbiol 6:1433. https://doi.org/10.3389/fmicb.2015.01433

    Article  PubMed  PubMed Central  Google Scholar 

  • Bingol K, Bruschweiler-Li L, Yu C, Somogyi A, Zhang F, Brüschweiler R (2015) Metabolomics beyond spectroscopic databases: a combined MS/NMR strategy for the rapid identification of new metabolites in complex mixtures. Anal Chem 87:3864–3870

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Bingol K, Bruschweiler-Li L, Li D, Zhang B, Xie M, Brüschweiler R (2016) Emerging new strategies for successful metabolite identification in metabolomics. Bioanalysis 8:557–573. https://doi.org/10.4155/bio-2015-0004

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Binkhathlan Z, Lavasanifar A (2013) P-glycoprotein inhibition as a therapeutic approach for overcoming multidrug resistance in cancer: current status and future perspectives. Curr Cancer Drug Targets 13:326–346

    Article  PubMed  CAS  Google Scholar 

  • Bishayee A, Sethi G (2016) Bioactive natural products in cancer prevention and therapy: progress and promise. Semin Cancer Biol 41:1–3. https://doi.org/10.1016/j.semcancer.2016.08.006

    Article  CAS  Google Scholar 

  • Blakeley J (2008) Drug delivery to brain tumors. Curr Neurol Neurosci Rep 8:235–241

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Bon RS, Waldmann H (2010) Bioactivity-guided navigation of chemical space. Acc Chem Res 43:1103–1114

    Article  PubMed  CAS  Google Scholar 

  • Bourne DG, Morrow KM, Webster NS (2016) Insights into the coral microbiome: underpinning the health and resilience of reef ecosystems. Annu Rev Microbiol 70:317–340

    Article  PubMed  CAS  Google Scholar 

  • Brigger I, Dubernet C, Couvreur P (2002) Nanoparticles in cancer. Adv Drug Deliv Rev 54:631–651

    Article  PubMed  CAS  Google Scholar 

  • Broekgaarden M, Weijer R, van Gulik TM, Hamblin MR, Heger M (2015) Tumor cell survival pathways activated by photodynamic therapy: a molecular basis for pharmacological inhibition strategies. Cancer Metastasis Rev 34:643–690

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Brown WR, Ahnen DJ (2015) The international health care burden of cancers of the gastrointestinal tract and liver. Cancer Res Front 1:1–9

    Google Scholar 

  • Brusotti G, Cesari I, Dentamaro A, Caccialanza G, Massolini G (2014) Isolation and characterization of bioactive compounds from plant resources: the role of analysis in the ethnopharmacological approach. J Pharm Biomed Anal 87:218–228

    Article  PubMed  CAS  Google Scholar 

  • Cagnetta A, Adamia S, Acharya C, Patrone F, Miglino M, Nencioni A, Gobbi M, Cea M (2014) Role of genotype-based approach in the clinical management of adult acute myeloid leukemia with normal cytogenetics. Leuk Res 38:649–659

    Article  PubMed  CAS  Google Scholar 

  • Callaghan R, Luk F, Bebawy M (2014) Inhibition of the multidrug resistance P-glycoprotein: time for a change of strategy. Drug Metab Dispos 42:623–631

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Caporaso JG, Lauber CL, Walters WA, Berg-Lyons D, Huntley J, Fierer N, Owens SM, Betley J, Fraser L, Bauer M, Gormley N, Gilbert JA, Smith G, Knight R (2012) Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms. ISME J 6:1621–1624

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Cardoso Filho JA, Pascholati SF, Sobrinho RR (2016) Mycorrhizal association and their role in plant disease protection. In: Hakeem KR, Akhtar MS (eds) Plant, soil, and microbes: mechanisms and molecular interactions, vol 2. Springer, Cham, pp 95–143

    Chapter  Google Scholar 

  • Carlson EE (2010) Natural products as chemical probes. ACS Chem Biol 5:639–653

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Carrano L, Marinelli F (2015) The relevance of chemical dereplication in microbial natural product screening. J Appl Bioanal 1:55–67

    Article  CAS  Google Scholar 

  • Ceder J, Elgqvist J (2017) Targeting prostate cancer stem cells with alpha-particle therapy. Front Oncol 6:273. https://doi.org/10.3389/fonc.2016.00273

    Article  PubMed  PubMed Central  Google Scholar 

  • Chabner BA, Roberts TG Jr (2005) Timeline: chemotherapy and the war on cancer. Nat Rev Cancer 5:65–72

    Article  PubMed  CAS  Google Scholar 

  • Chandra S (2012) Endophytic fungi: novel sources of anticancer lead molecules. Appl Microbiol Biotechnol 95:47–59

    Article  PubMed  CAS  Google Scholar 

  • Chang J, Kwon HJ (2016) Discovery of novel drug targets and their functions using phenotypic screening of natural products. J Ind Microbiol Biotechnol 43:221–231

    Article  PubMed  CAS  Google Scholar 

  • Chaparro JM, Badri DV, Vivanco JM (2014) Rhizosphere microbiome assemblage is affected by plant development. ISME J 8:790–803

    Article  PubMed  CAS  Google Scholar 

  • Charlop-Powers Z, Owen JG, Reddy BVB, Ternei MA, Guimarães DO, de Frias UA, Pupo MT, Seepe P, Feng Z, Brady SF (2015) A global biogeographic sampling of bacterial secondary metabolism. eLife 4:e05048. https://doi.org/10.7554/eLife.05048

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Chaudhary DK, Dahal RH (2017) DNA bar-code for identification of microbial communities: a mini review. EC Microbiol 6:219–224

    Google Scholar 

  • Chen C, Zhou J, Ji C (2010) Quercetin: a potential drug to reverse multidrug resistance. Life Sci 87:333–338

    Article  PubMed  CAS  Google Scholar 

  • Chen J, Zhang XD, Jiang Z (2013) The application of fungal β-glucans for the treatment of colon cancer. Anticancer Agents Med Chem 13:725–730

    Article  PubMed  CAS  Google Scholar 

  • Chen T, Zhao J, Ma J (2015) Web resources for mass spectrometry-based proteomics. Genomics Proteomics Bioinformatics 13:36–39

    Article  PubMed  PubMed Central  Google Scholar 

  • Chen H, Shen J, Choy E, Hornicek FJ, Duan Z (2016a) Targeting protein kinases to reverse multidrug resistance in sarcoma. Cancer Treat Rev 43:8–18

    Article  PubMed  CAS  Google Scholar 

  • Chen L, Zhang QY, Jia M, Ming QL, Yue W, Rahman K, Qin LP, Han T (2016b) Endophytic fungi with antitumor activities: their occurrence and anticancer compounds. Crit Rev Microbiol 42:454–473

    PubMed  CAS  Google Scholar 

  • Cheng KW, Wong CC, Wang M, He QY, Chen F (2010) Identification and characterization of molecular targets of natural products by mass spectrometry. Mass Spectrom Rev 29:126–155

    PubMed  CAS  Google Scholar 

  • Cherigo L, Lopez D, Martinez-Luis S (2015) Marine natural products as breast cancer resistance protein inhibitors. Mar Drugs 13:2010–2029

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Cheung RC, Ng TB, Wong JH, Chen Y, Chan WY (2016) Marine natural products with anti-inflammatory activity. Appl Microbiol Biotechnol 100:1645–1666

    Article  PubMed  CAS  Google Scholar 

  • Chiba T, Tsuchiya T, Mori R, Shimokawa I (2012) Protein reporter bioassay systems for the phenotypic screening of candidate drugs: a mouse platform for anti-aging drug screening. Sensors 12:1648–1656

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Cho YS, Kwon HJ (2012) Identification and validation of bioactive small molecule target through phenotypic screening. Bioorg Med Chem 20:1922–1928

    Article  PubMed  CAS  Google Scholar 

  • Choi YH, Yu AM (2014) ABC transporters in multidrug resistance and pharmacokinetics, and strategies for drug development. Curr Pharm Des 20:793–807

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Christina A, Christapher V, Bhore SJ (2013) Endophytic bacteria as a source of novel antibiotics: an overview. Pharmacogn Rev 7:11–16

    Article  PubMed  PubMed Central  Google Scholar 

  • Cichonska A, Rousu J, Aittokallio T (2015) Identification of drug candidates and repurposing opportunities through compound-target interaction networks. Expert Opin Drug Discovery 10:1333–1345

    Article  PubMed  CAS  Google Scholar 

  • Colabufo NA, Berardi F, Cantore M, Contino M, Inglese C, Niso M, Perrone R (2010) Perspectives of P-glycoprotein modulating agents in oncology and neurodegenerative diseases: pharmaceutical, biological, and diagnostic potentials. J Med Chem 53:1883–1897

    Article  PubMed  CAS  Google Scholar 

  • Colby AH, Oberlies NH, Pearce CJ, Herrera VL, Colson YL, Grinstaff MW (2017) Nanoparticle drug delivery systems for peritoneal cancers: a case study of the design, characterization, and development of the expansile nanoparticle. Rev Nanomed Nanobiotechnol 9:3. https://doi.org/10.1002/wnan.1451

    Google Scholar 

  • Collins I, Jones AM (2014) Diversity oriented synthetic strategies applied to cancer chemical biology and drug discovery. Molecules 19:17221–17255

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Conti P, Tamborini L, Pinto A, Blondel A, Minoprio P, Mozzarelli A, De Micheli C (2011) Drug discovery targeting amino acid racemases. Chem Rev 11:6919–6946

    Article  CAS  Google Scholar 

  • Cragg GM, Newman DJ (2013) Natural products: a continuing source of novel drug leads. Biochim Biophys Acta 1830:3670–3695

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Cripe LD, Uno H, Paietta EM, Litzow MR, Ketterling RP, Bennett JM, Rowe JM, Lazarus HM, Luger S, Tallman MS (2010) Zosuquidar, a novel modulator of P-glycoprotein, does not improve the outcome of older patients with newly diagnosed acute myeloid leukemia: a randomized, placebo-controlled trial of the eastern cooperative oncology group 3999. Blood 116:4077–4085

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Croes S, Weyens N, Janssen J, Vercampt H, Colpaert JV, Carleer R, Vangronsveld J (2013) Bacterial communities associated with Brassica napus L. grown on trace element contaminated and non-contaminated fields: a genotypic and phenotypic comparison. Microb Biotechnol 6:371–384

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Crutchfield CA, Thomas SN, Sokoll LJ, Chan DW (2016) Advances in mass spectrometry-based clinical biomarker discovery. Clin Proteomics 13:1. https://doi.org/10.1186/s12014-015-9102-9

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Cuadros-Orellana S, Leite LR, Smith A, Medeiros JD, Badotti F, Fonseca PLC, Vaz ABM, Oliveira G, Góes-Neto A (2013) Assessment of fungal diversity in the environment using metagenomics: a decade in review. Fungal Genom Biol 3:110. https://doi.org/10.4172/2165-8056.1000110

    Article  CAS  Google Scholar 

  • Cui H, Zhang AJ, Chen M, Liu JJ (2015) ABC transporter inhibitors in reversing multidrug resistance to chemotherapy. Curr Drug Targets 16:1356–1371

    Article  PubMed  CAS  Google Scholar 

  • Darby RA, Callaghan R, Mcmahon RM (2011) P-glycoprotein inhibition; the past, the present and the future. Curr Drug Metab 12:722–731

    Article  PubMed  CAS  Google Scholar 

  • de Bary A (1866) Morphologie and physiologie der pilze, flechten and myxomyceten. Holfmeister’s handbook of physiological botany, vol 2. Leipzig, p 334

    Google Scholar 

  • de Souza SFL, Romão-Dumaresq AS, Lacava PT, Harakava R, Azevedo JL, de Melo IS, Pizzirani-Kleiner AA (2013) Species diversity of culturable endophytic fungi from Brazilian mangrove forests. Curr Genet 59:153–166

    Article  CAS  Google Scholar 

  • Demain AL (2014) Importance of microbial natural products and the need to revitalize their discovery. J Ind Microbiol Biotechnol 41:185–201

    Article  PubMed  CAS  Google Scholar 

  • Deng Y, Yang F, Cocco E, Song E, Zhang J, Cui J, Mohideen M, Bellone S, Santin AD, Saltzman WM (2016) Improved I.P. drug delivery with bioadhesive nanoparticles. Proc Natl Acad Sci USA 113:11453–11458

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Deshmukh SK, Verekar SA, Bhave SV (2015) Endophytic fungi: a reservoir of antibacterials. Front Microbiol 5:715. https://doi.org/10.3389/fmicb.2014.00715

    Article  PubMed  PubMed Central  Google Scholar 

  • Dinic J, Podolski-Renic A, Stankovic T, Bankovic J, Pesic M (2015) New approaches with natural product drugs for overcoming multidrug resistance in cancer. Curr Pharm Des 21:5589–5604

    Article  PubMed  CAS  Google Scholar 

  • Doi H, Horiike N, Hiraoka A, Koizumi Y, Yamamoto Y, Hasebe A, Ichikawa S, Yano M, Miyamoto Y, Ninomiya T, Ishimaru Y, Miyagawa M, Takamura K, Kawasaki H, Kozuka T, Maeda T, Yoshino T (2008) Primary hepatic marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue type: case report and review of the literature. Int J Hematol 88:418–423

    Article  PubMed  Google Scholar 

  • Doolittle E, Peiris PM, Doron G, Goldberg A, Tucci S, Rao S, Shah S, Sylvestre M, Govender P, Turan O, Lee Z, Schiemann WP, Efstathios Karathanasis E (2015) Spatiotemporal targeting of a dual-ligand nanoparticle to cancer metastasis. ACS Nano 9:8012–8021

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Dutta D, Chandra K, Gogoi PR, Dutta P (2014) Endophytes: exploitation as a tool in plant protection. Braz Arch Biol Technol 57:621–629

    Article  Google Scholar 

  • Edwardson DW, Narendrula R, Chewchuk S, Mispel-Beyer K, Mapletoft JP, Parissenti AM (2015) Role of drug metabolism in the cytotoxicity and clinical efficacy of anthracyclines. Curr Drug Metab 16:412–426

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Eevers N, Gielen M, Sánchez-López A, Jaspers S, White JC, Vangronsveld J, Weyens N (2015) Optimization of isolation and cultivation of bacterial endophytes through the addition of plant extract to nutrient media. Microb Biotechnol 8:707–715

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Eid SY, El-Readi MZ, Fatani SH, Nour Eldin EEM, Wink M (2015) Natural products modulate the multifactorial multidrug resistance of cancer. Pharmacol Pharm 6:146–176

    Article  CAS  Google Scholar 

  • El-Araby ME, Omar AM, Khayat MT, Assiri HA, Al-Abd AM (2017) Molecular mimics of classic p-glycoprotein inhibitors as multidrug resistance suppressors and their synergistic effect on paclitaxel. PLoS One 12:e0168938. https://doi.org/10.1371/journal.pone.0168938

    Article  PubMed  PubMed Central  Google Scholar 

  • Elipe MVS (2003) Advantages and disadvantages of nuclear magnetic resonance spectroscopy as hyphenated technique. Anal Chim Acta 497:1–25

    Article  CAS  Google Scholar 

  • Everett JR (2015) Pharmacometabonomics in humans: a new tool for personalized medicine. Pharmacogenomics 16:737–754

    Article  PubMed  CAS  Google Scholar 

  • Everett JR (2016) From metabonomics to pharmacometabonomics: the role of metabolic profiling in personalized medicine. Front Pharmacol 7:297. https://doi.org/10.3389/fphar.2016.00297

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Everett JR, Loo RL, Pullen FS (2013) Pharmacometabonomics and personalized medicine. Ann Clin Biochem 50:523–545

    Article  PubMed  Google Scholar 

  • Fanciullino R, Ciccolini J, Milano G (2013) Challenges, expectations and limits for nanoparticles-based therapeutics in cancer: a focus on nano-albumin-bound drugs. Crit Rev Oncol Hematol 88:504–513

    Article  PubMed  Google Scholar 

  • Farrar K, Bryant D, Cope-Selby N (2014) Understanding and engineering beneficial plant-microbe interactions: plant growth promotion in energy crops. Plant Biotechnol J 12:1193–1206

    Article  PubMed  PubMed Central  Google Scholar 

  • Ferlay J, Soerjomataram I, Dikshit R, Eser S, Mathers C, Rebelo M, Parkin DM, Forman D, Bray F (2015) Cancer incidence and mortality worldwide: sources, methods and major patterns in GLOBOCAN 2012. Int J Cancer 136:E359–E386. https://doi.org/10.1002/ijc.29210

    Article  PubMed  CAS  Google Scholar 

  • Fernando IP, Nah JW, Jeon YJ (2016) Potential anti-inflammatory natural products from marine algae. Environ Toxicol Pharmacol 48:22–30

    Article  PubMed  CAS  Google Scholar 

  • Fierro-Cruz JE, Jiménez P, Coy-Barrera E (2017) Fungal endophytes isolated from Protium heptaphyllum and Trattinnickia rhoifolia as antagonists of Fusarium oxysporum. Rev Argent Microbiol 49:255–263

    PubMed  Google Scholar 

  • Finkel OM, Burch AY, Lindow SE, Post AF, Belkin S (2011) Geographical location determines the population structure in phyllosphere microbial communities of a salt-excreting desert tree. Appl Environ Microbiol 77:7647–7655

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Firakova S, Sturdíkova M, Muckova M (2007) Bioactive secondary metabolites produced by microorganisms associated with plants. Biologia 62:251–257

    Article  CAS  Google Scholar 

  • Fortin S, Bérubé G (2013) Advances in the development of hybrid anticancer drugs. Expert Opin Drug Discovery 8:1029–1047

    Article  PubMed  CAS  Google Scholar 

  • Fridlender M, Kapulnik Y, Koltai H (2015) Plant-derived substances with anti-cancer activity: from folklore to practice. Front Plant Sci 6:799. https://doi.org/10.3389/fpls.2015.00799

    Article  PubMed  PubMed Central  Google Scholar 

  • Friedman M (2016) Mushroom polysaccharides: chemistry and antiobesity, antidiabetes, anticancer, and antibiotic properties in cells, rodents, and humans. Foods 5:80. https://doi.org/10.3390/foods5040080

    Article  PubMed Central  CAS  Google Scholar 

  • Gao D, Tao Y (2012) Current molecular biologic techniques for characterizing the environmental microbial community. Front Environ Sci Eng 6:82–97

    Article  Google Scholar 

  • Gazis R, Chaverri P (2010) Diversity of fungal endophytes in leaves and stems of wild rubber trees (Hevea brasiliensis) in Peru. Fungal Ecol 3:240–254

    Article  Google Scholar 

  • Genilloud O (2014) The re-emerging role of microbial natural products in antibiotic discovery. Antonie Van Leeuwenhoek 106:173–188. https://doi.org/10.1007/s10482-014-0204-6

    Article  PubMed  CAS  Google Scholar 

  • Gika HG, Theodoridis GA, Plumb RS, Wilson ID (2014) Current practice of liquid chromatography-mass spectrometry in metabolomics and metabonomics. J Pharm Biomed Anal 87:12–25. https://doi.org/10.1016/j.jpba.2013.06.032

    Article  PubMed  CAS  Google Scholar 

  • Gilbert SF, McDonald E, Boyle N, Buttino N, Gyi L, Mai M, Prakash N, Robinson J (2010) Symbiosis as a source of selectable epigenetic variation: taking the heat for the big guy. Philos Trans R Soc B 365:671–678

    Article  Google Scholar 

  • Girardin F (2006) Membrane transporter proteins: a challenge for CNS drug development. Dialogues Clin Neurosci 8:311–321

    PubMed  PubMed Central  Google Scholar 

  • Goda K, Fenyvesi F, Bacsó Z, Nagy H, Márián T, Megyeri A, Krasznai Z, Juhász I, Vecsernyés M, Szabó G Jr (2006) Complete inhibition of P-glycoprotein by simultaneous treatment with a distinct class of modulators and the UIC2 monoclonal antibody. J Pharmacol Exp Ther 320:81–88

    Article  PubMed  CAS  Google Scholar 

  • Gomes N, Lefranc F, Kijjoa A, Kiss R (2015) Can some marine-derived fungal metabolites become actual anticancer agents. Mar Drugs 13:3950–3991

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Gorzelak MA, Asay AK, Pickles BJ, Simard SW (2015) Interplant communication through mycorrhizal networks mediates complex adaptive behavior in plant communities. AoB Plants 7:plv050. https://doi.org/10.1093/aobpla/plv050

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Gouda S, Das G, Sen SK, Shin HS, Patra JK (2016) Endophytes: a treasure house of bioactive compounds of medicinal importance. Front Microbiol 7:1538. https://doi.org/10.3389/fmicb.2016.0153

    Article  PubMed  PubMed Central  Google Scholar 

  • Gourion B, Berrabah F, Ratet P, Stacey G (2015) Rhizobium-legume symbioses: the crucial role of plant immunity. Trends Plant Sci 20:186–194. https://doi.org/10.1016/j.tplants.2014.11.008

    Article  PubMed  CAS  Google Scholar 

  • Gowda GAN, Raftery D (2013) Biomarker discovery and translation in metabolomics. Curr Metabolomics 1:227–240

    Article  CAS  Google Scholar 

  • Gray-Schopfer V, Wellbrock C, Marais R (2007) Melanoma biology and new targeted therapy. Nature 445:851–857

    Article  PubMed  CAS  Google Scholar 

  • Griffiths WJ, Koal T, Wang Y, Kohl M, Enot DP, Deigner HP (2010) Targeted metabolomics for biomarker discovery. Angew Chem Int Ed Engl 49:542654–542645. https://doi.org/10.1002/anie.200905579

    Article  CAS  Google Scholar 

  • Gul S (2017) Epigenetic assays for chemical biology and drug discovery. Clin Epigenetics 9:41. https://doi.org/10.1186/s13148-017-0342-6

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Gunatilaka AAL (2006) Natural products from plant-associated microorganisms: distribution, structural diversity, bioactivity, and implications of their occurrence. J Nat Prod 69:509–526

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Gunji S, Obama K, Matsui M, Tabata Y, Sakai Y (2013) A novel drug delivery system of intraperitoneal chemotherapy for peritoneal carcinomatosis using gelatin microspheres incorporating cisplatin. Surgery 154:991–999

    Article  PubMed  Google Scholar 

  • Gupta A, Chaphalkar SR (2015) Cancer constricting mankind from top 5 killer diseases. Micro Med 3:36–44

    Google Scholar 

  • Gupta R, Gabrielsen B, Ferguson SM (2005) Nature’s medicines: traditional knowledge and intellectual property management. Case studies from the National Institutes of Health (NIH), USA. Curr Drug Discov Technol 2:203–219

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Gupta VK, Bhalla Y, Jaitak V (2014) Impact of ABC transporters, glutathione conjugates in MDR and their modulation by flavonoids: an overview. Med Chem Res 23:1–15

    Article  CAS  Google Scholar 

  • Hagmann W, Faissner R, Schnölzer M, Löhr M, Jesnowski R (2010) Membrane drug transporters and chemoresistance in human pancreatic carcinoma. Cancers 3:106–125

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Hardoim PR, Hardoim CCP, van Overbeek LS, van Elsas JD (2012) Dynamics of seed-borne rice endophytes on early plant growth stages. PLoS One 7:e30438. https://doi.org/10.1371/journal.pone.0030438

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Hardoim PR, Van Overbeek LS, Berg G, Pirttila AM, Compant S, Campisano A, Doring M, Sessitsch A (2015) The hidden world within plants: ecological and evolutionary considerations for defining the functioning of microbial endophytes. Microbiol Mol Biol Rev 79:293–320. https://doi.org/10.1128/MMBR.00050-14

    Article  PubMed  PubMed Central  Google Scholar 

  • Harguindey S, Orive G, Luis Pedraz J, Paradiso A, Reshkin SJ (2005) The role of pH dynamics and the Na+/H+ antiporter in the etiopathogenesis and treatment of cancer. Two faces of the same coin-one single nature. Biochim Biophys Acta 1756:1–24

    PubMed  CAS  Google Scholar 

  • Hart CP (2005) Finding the target after screening the phenotype. Drug Discov Today 10:513–519

    Article  PubMed  CAS  Google Scholar 

  • Hartel PH, Bratthauer G, Hartel JV, Fanburg-Smith JC (2011) Primary malignant fibrous histiocytoma (myxofibrosarcoma/pleomorphic sarcoma not otherwise specified) of the breast: a clinicopathologic study of 19 cases. Ann Diagn Pathol 15:407–413

    Article  PubMed  Google Scholar 

  • Hartley SE, Gange AC (2009) Impacts of plant symbiotic fungi on herbivores: mutualism in a multitrophic context. Annu Rev Entomol 54:323–342

    Article  PubMed  CAS  Google Scholar 

  • He Z, Deng Y, Van Nostrand JD, Tu Q, Xu M, Hemme CL, Li X, Wu L, Gentry TJ, Yin Y, Liebich J, Hazen TC, Zhou J (2010) GeoChip 3.0 as a high-throughput tool for analyzing microbial community composition, structure and functional activity. ISME J 4:1167–1179. https://doi.org/10.1038/ismej.2010.46

    Article  PubMed  CAS  Google Scholar 

  • He SM, Li R, Kanwar JR, Zhou SF (2011) Structural and functional properties of human multidrug resistance protein 1 (MRP1/ABCC1). Curr Med Chem 18:439–481

    Article  PubMed  CAS  Google Scholar 

  • He J, Tian N, Yang Y, Jin L, Feng X, Hua J, Lin S, Wang B, Li H, Wang J (2017) miR-185 enhances the inhibition of proliferation and migration induced by ionizing radiation in melanoma. Oncol Lett 13:2442–2448

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Hebert PD, Cywinska A, Ball SL, deWaard JR (2003) Biological identifications through DNA barcodes. Proc Biol Sci 270:313–321

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Herrera VL, Colby AH, Tan GA, Moran AM, O’Brien MJ, Colson YL, Ruiz-Opazo N, Grinstaff MW (2016) Evaluation of expansile nanoparticle tumor localization and efficacy in a cancer stem cell-derived model of pancreatic peritoneal carcinomatosis. Nanomedicine 11:1001–1115. https://doi.org/10.2217/nnm-2015-0023

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Higginbotham SJ, Arnold AE, Ibañez A, Spadafora C, Coley PD, Kursar TA (2013) Bioactivity of fungal endophytes as a function of endophyte taxonomy and the taxonomy and distribution of their host plants. PLoS One 8:e73192. https://doi.org/10.1371/journal.pone.0073192

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Higgins CF (2007) Multiple molecular mechanisms for multidrug resistance transporters. Nature 446:749–757

    Article  PubMed  CAS  Google Scholar 

  • Hoffmann K, Bekeredjian R, Schmidt J, Büchler MW, Märten A (2009) Effects of the high-affinity peptide reversin 121 on multidrug resistance proteins in experimental pancreatic cancer. Tumor Biol 29:351–358

    Article  CAS  Google Scholar 

  • Hong J, Yang L, Zhang D, Shi J (2016) Plant metabolomics: an indispensable system biology tool for plant science. Int J Mol Sci 17:767–783. https://doi.org/10.3390/ijms17060767

    Article  PubMed Central  CAS  Google Scholar 

  • Ibekwe NN, Ameh SJ (2015) Hyphenated techniques in liquid chromatography as current trends in natural products analysis. Int Res J Pure Appl Chem 7:132–149. https://doi.org/10.9734/IRJPAC/2015/14458

    Article  CAS  Google Scholar 

  • Imhoff JF (2016) Natural products from marine fungi still an underrepresented resource. Mar Drugs 16:19. https://doi.org/10.3390/md14010019

    Article  CAS  Google Scholar 

  • Isgut M, Rao M, Yang C, Subrahmanyam V, Rida PCG, Aneja R (2018) Application of combination high throughput phenotypic screening and target identification methods for the discovery of natural-product based combination drugs. Med Res Rev 38:504-524

    Article  PubMed  Google Scholar 

  • Ito T, Masubuchi M (2014) Dereplication of microbial extracts and related analytical technologies. J Antibiot 67:353–360

    Article  CAS  Google Scholar 

  • Jain PK, Joshi H (2012) Coumarin: chemical and pharmacological profile. J Appl Pharm Sci 6:236–240. https://doi.org/10.7324/JAPS.2012.2643

    Article  CAS  Google Scholar 

  • Jain S, Abraham I, Carvalho P, Kuang YH, Shaala LA, Youssef DT, Avery MA, Chen ZS, El Sayed KA (2009) Sipholane triterpenoids: chemistry, reversal of ABCB1/ P-glycoprotein-mediated multidrug resistance, and pharmacophore modeling. J Nat Prod 72:1291–1298

    Article  PubMed  CAS  Google Scholar 

  • Jemal A, Bray F, Center MM, Ferlay J, Ward E, Forman D (2011) Global cancer statistics. CA Cancer J Clin 61:69–90

    Article  PubMed  Google Scholar 

  • Jia M, Chen L, Xin HL, Zheng CJ, Rahman K, Han T, Qin LP (2016) A friendly relationship between endophytic fungi and medicinal plants: a systematic review. Front Microbiol 7:906. https://doi.org/10.3389/fmicb.2016.00906

    Article  PubMed  PubMed Central  Google Scholar 

  • Jiang Y, Xiong X, Danska J, Parkinson J (2016) Metatranscriptomic analysis of diverse microbial communities reveals core metabolic pathways and microbiome specific functionality. Microbiome 4:2. https://doi.org/10.1186/s40168-015-0146-x

    Article  PubMed  PubMed Central  Google Scholar 

  • Jiang W, Gao L, Li P, Kan H, Qu J, Men L, Liu Z, Liu Z (2017) Metabonomics study of the therapeutic mechanism of fenugreek galactomannan on diabetic hyperglycemia in rats, by ultra-performance liquid chromatography coupled with quadrupole time-of-flight mass spectrometry. J Chromatogr B Anal Technol Biomed Life Sci 1044-1045:8–16. https://doi.org/10.1016/j.jchromb.2016.12.039

    Article  CAS  Google Scholar 

  • Jin L, Quan C, Hou X, Fan S (2016) Potential pharmacological resources: natural bioactive compounds from marine-derived fungi. Mar Drugs 14:76. https://doi.org/10.3390/md14040076

    Article  PubMed Central  CAS  Google Scholar 

  • Johnson D, Gilbert L (2015) Interplant signaling through hyphal networks. New Phytol 205:1448–1453

    Article  PubMed  Google Scholar 

  • Joo WD, Visintina I, Mora G (2013) Targeted cancer therapy-are the days of systemic chemotherapy numbered. Maturitas 76:308–314

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Joseph B, Priya RM (2011) Bioactive compounds from endophytes and their potential in pharmaceutical effect: a review. Am J Biochem Mol Biol 1:291–309

    Article  Google Scholar 

  • Kandalaft LE, Singh N, Liao JB, Facciabene A, Berek JS, Powell DJ, Coukos G (2010) The emergence of immunomodulation: combinatorial immunochemotherapy opportunities for the next decade. Gynecol Oncol 116:222–233

    Article  PubMed  CAS  Google Scholar 

  • Katiyar C, Gupta A, Kanjilal S, Katiyar S (2012) Drug discovery from plant sources: an integrated approach. Ayu 33:10–19

    Article  PubMed  PubMed Central  Google Scholar 

  • Katsila T, Spyroulias GA, Patrinos GP, Matsoukas MT (2016) Computational approaches for target identification and drug discovery. Comput Struct Biotechnol J 14:177–184

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Kaul S, Gupta S, Ahmed M, Dhar MK (2012) Endophytic fungi from medicinal plants: a treasure hunt for bioactive metabolites. Phytochem Rev 11:487–505

    Article  CAS  Google Scholar 

  • Kaul S, Sharma T, Dhar MK (2016) Omics tools for better understanding the plant-endophyte interactions. Front Plant Sci 7:955. https://doi.org/10.3389/fpls.2016.00955

    Article  PubMed  PubMed Central  Google Scholar 

  • Kharwar RN, Mishra A, Gond SK, Stierle A, Stierle D (2011) Anticancer compounds derived from fungal endophytes: their importance and future challenges. Nat Prod Rep 28:1208–1228

    Article  PubMed  CAS  Google Scholar 

  • Khoury JD, Catenacci DVT (2015) Next-generation companion diagnostics: promises, challenges, and solutions. Arch Pathol Lab Med 139:11–13

    Article  PubMed  PubMed Central  Google Scholar 

  • Kim B, Lee JW, Hong KT, Yu KS, Jang IJ, Park KD, Shin HY, Ahn HS, Cho JY, Kang HJ (2017) Pharmacometabolomics for predicting variable busulfan exposure in pediatric hematopoietic stem cell transplantation patients. Sci Rep 7:1711. https://doi.org/10.1038/s41598-017-01861-7

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Kitagawa M, Ikeda S, Tashiro E, Soga T, Imoto M (2010) Metabolomic identification of the target of the Filopodia protrusion inhibitor Glucopiericidin A. Chem Biol 17:989–998. https://doi.org/10.1016/j.chembiol.2010.06.017

    Article  PubMed  CAS  Google Scholar 

  • Knief C (2014) Analysis of plant-microbe interactions in the era of next-generation sequencing technologies. Front Plant Sci 5:216. https://doi.org/10.3389/fpls.2014.00216

    Article  PubMed  PubMed Central  Google Scholar 

  • Koehn FE (2008) High impact technologies for natural products screening. Prog Drug Res 65:177–210

    Google Scholar 

  • Kralova J, Kolar M, Kahle M, Truksa J, Lettlova S, Balusikova K, Bartunek P (2017) Glycol porphyrin derivatives and temoporfin elicit resistance to photodynamic therapy by different mechanisms. Sci Rep 7:44497. https://doi.org/10.1038/srep44497

    Article  PubMed  PubMed Central  Google Scholar 

  • Kremb S, Voolstra CR (2017) High-resolution phenotypic profiling of natural products-induced effects on the single-cell level. Sci Rep 7:44472. https://doi.org/10.1038/srep44472

    Article  PubMed  PubMed Central  Google Scholar 

  • Kumar S, Pandey AK (2013) Chemistry and biological activities of flavonoids: an overview. Sci World J 2013:162750. https://doi.org/10.1155/2013/162750

    Article  CAS  Google Scholar 

  • Kumar PM, Soujanya KN, Ravikanth G, Vasudeva R, Ganeshaiah KN, Shaanker RU (2014) Rohitukine, a chromone alkaloid and a precursor of flavopiridol, is produced by endophytic fungi isolated from Dysoxylum binectariferum Hook. F. and Amoora rohituka (Roxb). Wight & Arn. Phytomedicine 21:541–546

    Article  CAS  Google Scholar 

  • Kumar KA, Renuka N, Pavithra G, Kumar GV (2015) Comprehensive review on coumarins: molecules of potential chemical and pharmacological interest. J Chem Pharm Res 7:67–81

    CAS  Google Scholar 

  • Kuo MT (2009) Redox regulation of multidrug resistance in cancer chemotherapy: molecular mechanisms and therapeutic opportunities. Antioxid Redox Signal 11:99–133

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Kusari S, Spiteller M (2011) Are we ready for industrial production of bioactiveplant secondary metabolites utilizing endophytes? Nat Prod Rep 28:1203–1207. https://doi.org/10.1039/c1np00030f

    Article  PubMed  CAS  Google Scholar 

  • Kusari S, Hertweck C, Spiteller M (2012) Chemical ecology of endophytic fungi: origins of secondary metabolites. Chem Biol 19:792–798. https://doi.org/10.1016/j.chembiol.2012.06.004

    Article  PubMed  CAS  Google Scholar 

  • Kusari S, Singh S, Jayabaskaran C (2014a) Rethinking production of Taxol® (paclitaxel) using endophyte biotechnology. Trends Biotechnol 32:304–311

    Article  PubMed  CAS  Google Scholar 

  • Kusari S, Singh S, Jayabaskaran C (2014b) Biotechnological potential of plant-associated endophytic fungi: hope versus hype. Trends Biotechnol 32:297–303

    Article  PubMed  CAS  Google Scholar 

  • Kushi LH, Doyle C, McCullough M, Rock CL, Demark-Wahnefried W, Bandera EV, Gapstur S, Patel AV, Andrews K, Gansler T (2012) American Cancer Society guidelines on nutrition and physical activity for cancer prevention: reducing the risk of cancer with healthy food choices and physical activity. CA Cancer J Clin 62:30–67

    Article  PubMed  Google Scholar 

  • Lachance H, Wetzel S, Kumar K, Waldmann H (2012) Charting, navigating, and populating natural product chemical space for drug discovery. J Med Chem 55:5989–6001

    Article  PubMed  CAS  Google Scholar 

  • Laroche O, Wood SA, Tremblay LA, Lear G, Ellis JI, Pochon X (2017) Metabarcoding monitoring analysis: the pros and cons of using co-extracted environmental DNA and RNA data to assess offshore oil production impacts on benthic communities. Peer J 5:e3347. https://doi.org/10.7717/peerj.3347

    Article  PubMed  PubMed Central  Google Scholar 

  • Larsson J, Gottfries J, Muresan S, Backlund A (2007) ChemGPS-NP: tuned for navigation in biologically relevant chemical space. J Nat Prod 70:789–794

    Article  PubMed  CAS  Google Scholar 

  • Lei H, Hofferberth SC, Liu R, Colby A, Tevis KM, Catalano P, Grinstaff MW, Colson YL (2015) Paclitaxel-loaded expansile nanoparticles enhance chemotherapeutic drug delivery in mesothelioma 3-dimensional multicellular spheroids. J Thorac Cardiovasc Surg 149:1417–1424

    Article  PubMed  CAS  Google Scholar 

  • Leonard GD, Polgar O, Bates SE (2002) ABC transporters and inhibitors: new targets, new agents. Curr Opin Investig Drugs 3:1652–1659

    PubMed  CAS  Google Scholar 

  • Li L, Zhang Q, Liu A, Li X, Zhou H, Liu Y, Yan B (2011) Proteome interrogation using nanoprobes to identify targets of a cancer-killing molecule. Am Chem Soc 133:6886–6889

    Article  CAS  Google Scholar 

  • Li X, Ian Y, Ang SX, Zhang YM, Qin JC (2013) Cytotoxic azaphilone alkaloids from Chaetomium globosum TY1. Bioorg Med Chem Lett 23:2945–2947

    Article  PubMed  CAS  Google Scholar 

  • Lichtman MA (2010) Obesity and the risk for a hematological malignancy: leukemia, lymphoma, or myeloma. Oncologist 15:1083–1101

    Article  PubMed  PubMed Central  Google Scholar 

  • Lima AN, Philot EA, Trossini GH, Scott LP, Maltarollo VG, Honorio KM (2016) Use of machine learning approaches for novel drug discovery. Expert Opin Drug Discovery 11:225–239

    Article  CAS  Google Scholar 

  • Linardi RL, Natalin CC (2006) Multi-drug resistance (MDR1) gene and P-glycoprotein influence on pharmacokinetic and pharmacodynamics of therapeutic drugs. Cienc Rural 36:336–341

    Article  CAS  Google Scholar 

  • Lindequist U (2016) Marine derived pharmaceuticals challenges and opportunities. Biomol Ther 24:561–571

    Article  CAS  Google Scholar 

  • Ling V (1997) Multidrug resistance: molecular mechanisms and clinical relevance. Cancer Chemother Pharmacol 40:S3–S8

    Article  PubMed  CAS  Google Scholar 

  • Lionta E, Spyrou G, Vassilatis DK, Cournia Z (2014) Structure-based virtual screening for drug discovery: principles, applications, and recent advances. Curr Top Med Chem 14:1923–1938

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Liu R, Li X, Lam KS (2017) Combinatorial chemistry in drug discovery. Curr Opin Chem Biol 38:117–126

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Loman NJ, Misra RV, Dallman TJ, Constantinidou C, Gharbia SE, Wain J, Pallen MJ (2012) Performance comparison of benchtop high throughput sequencing platforms. Nat Biotechnol 30:434–439

    Article  PubMed  CAS  Google Scholar 

  • Long S, Sousa E, Kijjoa A, Pinto MM (2016) Marine natural products as models to circumvent multidrug resistance. Molecules 8:21. https://doi.org/10.3390/molecules21070892

    Article  CAS  Google Scholar 

  • Loo TW, Bartlett MC, Clarke DM (2009) Identification of residues in the drug translocation pathway of the human multidrug resistance P-glycoprotein by arginine mutagenesis. J Biol Chem 284:24074–24087

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Lucero ME, Unc A, Cooke P, Dowd S, Sun S (2011) Endophyte microbiome diversity in micropropagated Atriplex canescens and Atriplex torreyi var griffithsii. PLoS One 6:e17693. https://doi.org/10.1371/journal.pone.0017693

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Luter HM, Widder S, Botté ES, Wahab MA, Whalan S, Moitinho Silva L, Thomas T, Webster NS (2015) Biogeographic variation in the microbiome of the ecologically important sponge, Carteriospongia foliascens. Peer J 3:e1435. https://doi.org/10.7717/peerj.1435

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Lynn R, Bersabeh T, Lucile WE, Robert B, Nichole T, Alexander B, Barry R, LeDuc JW, Noah JW (2015) Adapting high-throughput screening methods and assays for biocontainment laboratories. Assay Drug Dev Technol 13:44–54

    Article  CAS  Google Scholar 

  • Ma C, Zhang J, Wang J (2016) Pharmacological characterization of the spectrum of antiviral activity and genetic barrier to drug resistance of M2-S31 N channel blockers. Mol Pharmacol 90:188–198. https://doi.org/10.1124/mol.116.105346

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Macalino SJ, Gosu V, Hong S, Choi S (2015) Role of computer-aided drug design in modern drug discovery. Arch Pharm Res 38:1686–1701. https://doi.org/10.1007/s12272-015-0640-5

    Article  PubMed  CAS  Google Scholar 

  • Macías-Rubalcava ML, Sánchez-Fernández RE (2017) Secondary metabolites of endophytic Xylaria species with potential applications in medicine and agriculture. World J Microbiol Biotechnol 33:15. https://doi.org/10.1007/s11274-016-2174-5

    Article  PubMed  CAS  Google Scholar 

  • Manter DK, Delgado JA, Holm DG, Stong RA (2010) Pyrosequencing reveals a highly diverse and cultivar-specific bacterial endophyte community in potato roots. Microb Ecol 60:157–166

    Article  PubMed  Google Scholar 

  • Maróti G, Kondorosi É (2014) Nitrogen-fixing Rhizobium-legume symbiosis: are polyploidy and host peptide-governed symbiont differentiation general principles of endosymbiosis. Front Microbiol 5:326. https://doi.org/10.3389/fmicb.2014.00326

    Article  PubMed  PubMed Central  Google Scholar 

  • Martínez-Pérez C, Ward C, Turnbull AK, Mullen P, Cook G, Meehan J, Jarman EJ, Thomson PIT, Campbell JC, McPhail DM, Harrison DJ, Langdon SP (2016) Antitumour activity of the novel flavonoid Oncamex in preclinical breast cancer models. Br J Cancer 114:905–916. https://doi.org/10.1038/bjc.2016.6

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Mayura K, Amol B (2015) Role of computational chemistry in drug design: an overview. Asian J Biochem Pharm Res 5:2231–2560

    Google Scholar 

  • Meanwell NA (2016) Improving drug design: an update on recent applications of efficiency metrics, strategies for replacing problematic elements, and compounds in nontraditional drug space. Chem Res Toxicol 29:564–616

    Article  PubMed  CAS  Google Scholar 

  • Mendes R, Garbeva P, Raaijmakers JM (2013) The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms. FEMS Microbiol Rev 37:634–663

    Article  PubMed  CAS  Google Scholar 

  • Meng X, Liang H, Luo L (2016) Antitumor polysaccharides from mushrooms: a review on the structural characteristics, antitumor mechanisms, and immunomodulating activities. Carbohydr Res 424:30–41. https://doi.org/10.1016/j.carres.2016.02.008

    Article  PubMed  CAS  Google Scholar 

  • Meyling NV, Hajek AE (2010) Principles of community and metapopulation ecology: application to fungal entomopathogens. BioControl 55:39–54

    Article  Google Scholar 

  • Michael S, Auld D, Klumpp C, Jadhav A, Zheng W, Thorne N, Austin CP, Inglese J, Simeonov A (2008) A robotic platform for quantitative high-throughput screening. Assay Drug Dev Technol 6:637–657

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Michalak K, Wesołowska O (2012) Polyphenols counteract tumor cell chemoresistance conferred by multidrug resistance proteins. Anticancer Agents Med Chem 12:880–890

    Article  PubMed  CAS  Google Scholar 

  • Mignani S, Bryszewska M, Klajnert-Maculewicz B, Zablocka M, Majoral JP (2015) Advances in combination therapies based on nanoparticles for efficacious cancer treatment: an analytical report. Biomacromolecules 16:1–27. https://doi.org/10.1021/bm501285t

    Article  PubMed  CAS  Google Scholar 

  • Miller KD, Siegel RL, Lin CC, Mariotto AB, Kramer JL, Rowland JH, Stein KD, Alteri R, Jemal A (2016) Cancer treatment and survivorship statistics, 2016. CA Cancer J Clin 66:271–289

    Article  PubMed  Google Scholar 

  • Miron A, Aprotosoaie AC, Trifan A, Xiao J (2017) Flavonoids as modulators of metabolic enzymes and drug transporters. Ann NY Acad Sci 1398:152–167

    Article  PubMed  CAS  Google Scholar 

  • Mishra J, Dromund J, Quazi SH, Satya Sridhar Karanki SS, Shaw JJ, Chen B, Kumar N (2013) Prospective of colon cancer treatments and scope for a combinatorial approach to enhanced cancer cell apoptosis. Crit Rev Oncol Hematol 86:232–250

    Article  PubMed  Google Scholar 

  • Mishra P, Kumar A, Nagireddy A, Mani DN, Shukla AK, Tiwari R, Sundaresan V (2016) DNA barcoding: an efficient tool to overcome authentication challenges in the herbal market. Plant Biotechnol J 14:8–21

    Article  PubMed  CAS  Google Scholar 

  • Mishra M, Mishra VK, Kashaw V, Iyer AK, Kashaw SK (2017) Comprehensive review of various strategies for antimalarial drug discovery. Eur J Med Chem 125:1300–1320

    Article  PubMed  CAS  Google Scholar 

  • Miyamoto S, Komiya M, Fujii G, Hamoya T, Nakanishi R, Fujimoto K, Mutoh M (2017) Preventive effects of heat-killed Enterococcus faecalis strain EC-12 on mouse intestinal tumor development. Int J Mol Sci 18:826. https://doi.org/10.3390/ijms18040826

    Article  PubMed Central  CAS  Google Scholar 

  • Modok S, Mellor HR, Callaghan R (2006) Modulation of multidrug resistance efflux pump activity to overcome chemoresistance in cancer. Curr Opin Pharmacol 6:350–354

    Article  PubMed  CAS  Google Scholar 

  • Molina LG, da Fonseca GC, de Morais GL, de Oliveira LFV, de Carvalho JB, Kulcheski FR, Margis R (2012) Metatranscriptomic analysis of small RNAs present in soybean deep sequencing libraries. Genet Mol Biol 35:292–303

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Monteiro MC, de la Cruz M, Cantizani J, Moreno C, Tormo JR, Mellado E, De Lucas JR, Asensio F, Valiante V, Brakhage AA, Latgé JP, Genilloud O, Vicente F (2012) A new approach to drug discovery: high-throughput screening of microbial natural extracts against Aspergillus fumigatus using resazurin. J Biomol Screen 17:542–549

    Article  PubMed  CAS  Google Scholar 

  • Monteiro MS, Carvalho M, Bastos ML, Guedes de Pinho P (2013) Metabolomics analysis for biomarker discovery: advances and challenges. Curr Med Chem 20:257–271

    Article  PubMed  CAS  Google Scholar 

  • Morales SE, Holben WE (2010) Linking bacterial identities and ecosystem processes: can “omic” analyses be more than the sum of their parts. FEMS Microbiol Ecol 75:2–16

    Article  CAS  Google Scholar 

  • Moudi M, Go R, Yien CYS, Nazre M (2013) Vinca alkaloids. Int J Prev Med 4:1231–1235

    PubMed  PubMed Central  Google Scholar 

  • Munoz M, Henderson M, Haber M, Norris M (2007) Role of the MRP1/ABCC1 multidrug transporter protein in cancer. IUBMB Life 59:752–757

    Article  PubMed  CAS  Google Scholar 

  • Nair DN, Padmavathy S (2014) Impact of endophytic microorganisms on plants, environment and humans. Sci World J 22:250693. https://doi.org/10.1155/2014/250693

    Article  Google Scholar 

  • Narayana KKC, Aswathanarayan JB, Vittal RR (2017) Endophytic peptides-a source of therapeutic agents. Curr Protein Pept Sci 18:284–290

    Article  PubMed  CAS  Google Scholar 

  • Nasir B, Fatima H, Ahmed M, Haq IU (2015) Recent trends and methods in antimicrobial drug discovery from plant sources. Austin J Microbiol 1:1002

    Google Scholar 

  • Navarro SL, Randolph TW, Shireman LM, Raftery D, McCune JS (2016) Pharmaco-metabonomic prediction of busulfan clearance in hematopoietic cell transplant recipients. J Proteome Res 15:2802–2811

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Negreiros de Carvalho PL, Silva Ede O, Chagas-Paula DA, Hortolan Luiz JH, Ikegaki M (2016) Importance and implications of the production of phenolic secondary metabolites by endophytic fungi: a mini-review. Mini Rev Med Chem 16:259–271

    Article  PubMed  CAS  Google Scholar 

  • Newman DJ, Cragg GM (2007) Natural products as sources of new drugs over the last 25 years. J Nat Prod 70:461–477

    Article  PubMed  CAS  Google Scholar 

  • Newman DJ, Cragg GM (2012) Natural products as sources of new drugs over the 30 years from 1981 to 2010. J Nat Prod 75:311–335

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Newman DJ, Cragg GM (2015) Endophytic and epiphytic microbes as “sources” of bioactive agents. Front Chem 3:34. https://doi.org/10.3389/fchem.2015.00034

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Newman DJ, Cragg GM (2016) Natural products as sources of new drugs from 1981 to 2014. J Nat Prod 79:629−661

    Article  CAS  Google Scholar 

  • Nicoletti R, Fiorentino A (2015) Plant bioactive metabolites and drugs produced by endophytic fungi of spermatophyta. Agriculture 5:918–970

    Article  CAS  Google Scholar 

  • Nicoletti R, Trincone A (2016) Bioactive compounds produced by strains of Penicillium and Talaromyces of marine origin. Mar Drugs 14:2. https://doi.org/10.3390/md14020037

    Article  CAS  Google Scholar 

  • Nielsen KF, Mansson M, Rank C, Frisvad JC, Larsen TO (2011) Dereplication of microbial natural products by LC-DAD-TOFMS. J Nat Prod 74:2338–2348

    Article  PubMed  CAS  Google Scholar 

  • Nisa H, Kamili AN, Nawchoo IA, Shafi S, Shameem N, Bandh SA (2015) Fungal endophytes as a prolific source of phytochemicals and other bioactive natural products: a review. Microb Pathog 82:50–59

    Article  PubMed  CAS  Google Scholar 

  • Nishiumi S, Suzuki M, Kobayashi T, Matsubara A, Azuma T, Yoshida M (2014) Metabolomics for biomarker discovery in gastroenterological cancer. Metabolites 4:547–571

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Nobili S, Lippi D, Witort E, Donnini M, Bausi L, Mini E, Capaccioli S (2009) Natural compounds for cancer treatment and prevention. Pharmacol Res 59:365–378

    Article  PubMed  CAS  Google Scholar 

  • Nobili S, Landini I, Mazzei T, Mini E (2012) Overcoming tumor multidrug resistance using drugs able to evade P-glycoprotein or to exploit its expression. Med Res Rev 32:1220–1262

    Article  PubMed  CAS  Google Scholar 

  • Nováková J, Farkašovský M (2013) Bioprospecting microbial metagenome for natural products. Biologia 68:1079–1086

    Article  CAS  Google Scholar 

  • O’Connor CJ, Beckmann HSG, Spring DR (2012) Diversity-oriented synthesis: producing chemical tools for dissecting biology. Chem Soc Rev 41:4444–4456

    Article  CAS  Google Scholar 

  • Ohgaki H, Kleihues P (2005) Epidemiology and etiology of gliomas. Acta Neuropathol 109:93–108

    Article  PubMed  Google Scholar 

  • Okazaki S, Tittabutr P, Teulet A, Thouin J, Fardoux J, Chaintreuil C, Gully D, Arrighi JF, Furuta N, Miwa H, Yasuda M, Nouwen N, Teaumroong N, Giraud E (2016) Rhizobium-legume symbiosis in the absence of Nod factors: two possible scenarios with or without the T3SS. ISME J 10:64–74

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Omuro AM, Delattre JY (2007) Editorial: what is new in the treatment of gliomas. Curr Opin Neurol 20:704–707

    Article  PubMed  Google Scholar 

  • Ozawa M, Shimojima M, Goto H, Watanabe S, Hatta Y, Kiso M, Furuta Y, Horimoto T, Peters NR, Hoffmann FM, Kawaoka Y (2013) A cell-based screening system for influenza A viral RNA transcription/replication inhibitors. Sci Rep 3:1106. https://doi.org/10.1038/srep01106

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Palmeira A, Sousa E, Vasconcelos MH, Pinto MM (2012) Three decades of P-gp inhibitors: skimming through several generations and scaffolds. Curr Med Chem 19:1946–2025

    Article  PubMed  CAS  Google Scholar 

  • Pandya HJ, Park K, Chen W, Chekmareva MA, Foran DJ, Desai JP (2015) Simultaneous MEMS-based electro-mechanical phenotyping of breast cancer. Lab Chip 15:3695–3706

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Panzarini E, Dini L (2014) Nanomaterial induced autophagy: a new reversal MDR tool in cancer therapy. Mol Pharm 11:2527–2538

    Article  PubMed  CAS  Google Scholar 

  • Patel KN, Patel JK, Patel MP, Rajput GC, Patel HA (2010) Introduction to hyphenated techniques and their applications in pharmacy. Pharm Methods 1:2–13

    Article  PubMed  PubMed Central  Google Scholar 

  • Patel DA, Patel AC, Nolan WC, Zhang Y, Holtzman MJ (2012) High throughput screening for small molecule enhancers of the interferon signaling pathway to drive next-generation antiviral drug discovery. PLoS One 7:e36594. https://doi.org/10.1371/journal.pone.0036594

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Patel DA, Patel AC, Nolan WC, Huang G, Romero AG, Charlton N, Agapov E, Zhang Y, Holtzman MJ (2014) High-throughput screening normalized to biological response: application to antiviral drug discovery. J Biomol Screen 19:119–130

    Article  PubMed  CAS  Google Scholar 

  • Patil YB, Swaminathan SK, Sadhukha T, Ma L, Panyam J (2010) The use of nanoparticle-mediated targeted gene silencing and drug delivery to overcome tumor drug resistance. Biomaterials 31:358–365

    Article  PubMed  CAS  Google Scholar 

  • Patridge E, Gareiss P, Kinch MS, Hoyer D (2016) An analysis of FDA-approved drugs: natural products and their derivatives. Drug Discov Today 21:204–207

    Article  PubMed  CAS  Google Scholar 

  • Pawar SV, Ho JC, Yadav GD, Yadav VG (2017) The impending renaissance in discovery and development of natural products. Curr Top Med Chem 17:251–267

    Article  PubMed  CAS  Google Scholar 

  • Paytubi S, de La Cruz M, Tormo JR, Martín J, González I, González-Menendez V, Balsalobre C (2017) A high-throughput screening platform of microbial natural products for the discovery of molecules with antibiofilm properties against Salmonella. Front Microbiol 8:326. https://doi.org/10.3389/fmicb.2017.00326

    Article  PubMed  PubMed Central  Google Scholar 

  • Pedrosa MO, da Cruz RMD, Viana JO, Moura RO, Ishiki HM, Filho JMB, Diniz MFFM, Scotti MT, Scotti L, Mendonca FJB (2017) Hybrid compounds as direct multitarget ligands: a review. Curr Top Med Chem 17:1044–1079

    Article  CAS  Google Scholar 

  • Pei C, Mi C, Sun L, Liu W, Li O, Hu X (2017) Diversity of endophytic bacteria of Dendrobium officinale based on culture dependent and culture independent methods. Biotechnol Biotechnol Equip 31:112–119. https://doi.org/10.1080/13102818.2016.1254067

    Article  Google Scholar 

  • Pereira RB, Andrade PB, Valentão P (2016) Chemical diversity and biological properties of secondary metabolites from sea hares of Aplysia genus. Mar Drugs 14:2. https://doi.org/10.3390/md14020039

    Article  CAS  Google Scholar 

  • Pérez-Herrero E, Fernández-Medarde A (2015) Advanced targeted therapies in cancer: drug nanocarriers, the future of chemotherapy. Eur J Pharm Biopharm 93:52–79

    Article  PubMed  CAS  Google Scholar 

  • Pérez-Victoria I, Martín J, Reyes F (2016) Combined LC/UV/MS and NMR strategies for the Dereplication of marine natural products. Planta Med 82:857–871

    Article  PubMed  CAS  Google Scholar 

  • Perkins C, Siddiqui S, Puri M, Demain AL (2016) Biotechnological applications of microbial bioconversions. Crit Rev Biotechnol 36:1050–1065

    Article  PubMed  CAS  Google Scholar 

  • Perotto S, Angelini P, Bianciotto V, Bonfante P, Girlanda M, Kull T, Mello A, Pecoraro L, Perini C, Persiani MA, Saitta A, Sarrocco S, Vannacci G, Venanzoni R, Venturella G, Selosse MA (2013) Interactions of fungi with other organisms. Plant Biosyst 147:208–218

    Article  Google Scholar 

  • Petrini O (1991) Fungal endophytes of tree leaves. In: Andrews JH, Hirano SS (eds) Microbial ecology of leaves. Springer, New York, pp 179–197

    Chapter  Google Scholar 

  • Philippot L, Raaijmakers JM, Lemanceau P, van der Putten WH (2013) Going back to the roots: the microbial ecology of the rhizosphere. Nat Rev Microbiol 11:789–799

    Article  PubMed  CAS  Google Scholar 

  • Piccart M (2003) The role of taxanes in the adjuvant treatment of early-stage breast cancer. Breast Cancer Res Treat 79:S25–S34

    Article  PubMed  CAS  Google Scholar 

  • Pick A, Müller H, Mayer R, Haenisch B, Pajeva IK, Weigt M (2011) Structure activity relationships of flavonoids as inhibitors of breast cancer resistance protein (BCRP). Bioorg Med Chem 19:2090–2102

    Article  PubMed  CAS  Google Scholar 

  • Pickens LB, Tang YI, Chooi YH (2011) Metabolic engineering for the production of natural products. Annu Rev Chem Biomol Eng 2:211–236

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Pimentel MR, Molina G, Dionisio AP, Maróstica MR, Pastore GM (2011) Use of endophytes to obtain bioactive compounds and their application in biotransformation process. Biotechnol Res Int 2011:576286. https://doi.org/10.4061/2011/576286

    Article  PubMed  CAS  Google Scholar 

  • Plodek A, Bracher F (2016) New perspectives in the chemistry of marine pyridoacridine alkaloids. Mar Drugs 14:2. https://doi.org/10.3390/md14020026

    Article  CAS  Google Scholar 

  • Porras-Alfaro A, Bayman P (2011) Hidden fungi, emergent properties: endophytes and microbiomes. Annu Rev Phytopathol 49:291–315

    Article  PubMed  CAS  Google Scholar 

  • Prado-Prado F, Garcia-Mera X, Rodriguez-Borges JE, Concu R, Perez-Montoto LG, Gonzalez-Diaz H, Duardo-Sanchez A (2013) Patents of bio-active compounds based on computer-aided drug discovery techniques. Front Biosci 5:399–407

    Article  Google Scholar 

  • Prasad R, Kumar M, Varma A (2015) Role of PGPR in soil fertility and plant health. In: Egamberdieva D, Shrivastava S, Varma A (eds) Plant growth-promoting rhizobacteria (PGPR) and medicinal plants. Springer, New York, pp 247–260

    Google Scholar 

  • Probst AJ, Weinmaier T, DeSantis TZ, Santo Domingo JW, Ashbolt N (2015) New perspectives on microbial community distortion after whole-genome amplification. PLoS One 10:e0124158. https://doi.org/10.1371/journal.pone.0124158

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Qayyum RS, Bakhsh L, Husnain T (2012) Entomopathogenic fungi as biological controllers: new insights into their virulence and pathogenicity. Arch Biol Sci 64:21–42

    Article  Google Scholar 

  • Qi BL, Liu P, Wang QY, Cai WJ, Yuan BF, Feng YQ (2014) Derivatization for liquid chromatography mass spectrometry. TrAC Trends Anal Chem 59:121–132

    Article  CAS  Google Scholar 

  • Qin S, Chen HH, Zhao GZ, Li J, Zhu WY, Xu LH, Jiang JH, Li WJ (2012) Abundant and diverse endophytic actinobacteria associated with medicinal plant Maytenus austroyunnanensis in Xishuangbanna tropical rainforest revealed by culture-dependent and culture-independent methods. Environ Microbiol Rep 4:522–531

    Article  PubMed  Google Scholar 

  • Qiu Q, Shi W, Li Z, Zhang B, Pan M, Cui J, Dai Y, Huang W, Qian H (2017) Exploration of 2-((Pyridin-4-ylmethyl)amino) nicotinamide derivatives as potent reversal agents against P-Glycoprotein-mediated multidrug resistance. J Med Chem 60:2930–2943

    Article  PubMed  CAS  Google Scholar 

  • Quesada-Moraga E, López-Díaz C, Landa BB (2014) The hidden habit of the entomopathogenic fungus Beauveria bassiana: first demonstration of vertical plant transmission. PLoS One 9:e89278. https://doi.org/10.1371/journal.pone.0089278

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Raj R, Mongia P, Kumar Sahu S, Ram A (2016) Nanocarriers based anticancer drugs: current scenario and future perceptions. Curr Drug Targets 17:206–228

    Article  PubMed  CAS  Google Scholar 

  • Reed LK, Baer CF, Edison AS (2017) Considerations when choosing a genetic model organism for metabolomics studies. Curr Opin Chem Biol 36:7–14

    Article  PubMed  CAS  Google Scholar 

  • Reinhold-Hurek B, Thomas Hurek T (2011) Living inside plants: bacterial endophytes. Curr Opin Plant Biol 14:435–443

    Article  PubMed  Google Scholar 

  • Ren L, Perera C, Hemar Y (2012) Antitumor activity of mushroom polysaccharides: a. Food Funct 3:1118–1130

    Article  PubMed  CAS  Google Scholar 

  • Richter C, Helaly SE, Thongbai B, Hyde KD, Stadler M (2016) Pyristriatins A and B: Pyridinocyathane antibiotics from the Basidiomycete Cyathus Cf. striatus. J Nat Prod 79:1684–1688

    Article  PubMed  CAS  Google Scholar 

  • Rillig MC, Wendt S, Antonovics J, Hempel S, Kohler J, Wehner J, Caruso T (2013) Interactive effects of root endophytes and arbuscular mycorrhizal fungi on an experimental plant community. Oecologia 174:263–270

    Article  PubMed  Google Scholar 

  • Riveiro ME, De Kimpe N, Moglioni A, Vázquez R, Monczor F, Shayo C, Davio C (2010) Coumarins: old compounds with novel promising therapeutic perspectives. Curr Med Chem 17:1325–1330

    Article  PubMed  CAS  Google Scholar 

  • Roblesa O, Romoa D (2014) Chemo and site-selective derivatizations of natural products enabling biological studies. Nat Prod Rep 31:318–334

    Article  Google Scholar 

  • Rodriguez RJ, White JF Jr, Arnold AE, Redman RS (2009) Fungal endophytes: diversity and functional roles. New Phytol 182:314–330

    Article  PubMed  CAS  Google Scholar 

  • Romagnolia R, Baraldia PG, Salvadora MK, Chayaha M, Camachoa ME, Prencipea F, Hamelb E, Consolaroc F, Bassoc G, Violac G (2014) Design, synthesis and biological evaluation of arylcinnamide hybrid derivatives as novel anticancer agents. Eur J Med Chem 81:394–407

    Article  CAS  Google Scholar 

  • Rosenblueth M, Martínez-Romero E (2006) Bacterial endophytes and their interactions with hosts. Mol Plant-Microbe Interact 19:827–837

    Article  PubMed  CAS  Google Scholar 

  • Roy MA, McDonald PR, Sittampalam S, Chagutur R (2010) Open access high throughput drug discovery in the public domain: a Mount Everest. Curr Pharm Biotechnol 11:764–778

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Rudgers JA, Clay K (2012) Microbial mutualists and biodiversity in ecosystems. In: Ohgushi T, Schmitz O, Holt RD (eds) Trait-mediated indirect interactions: ecological and evolutionary perspectives. Cambridge University Press, New York, pp 391–413

    Chapter  Google Scholar 

  • Rudgers J, Fischer S, Clay K (2010) Managing plant symbiosis: fungal endophyte genotype alters plant community composition. J Appl Ecol47:468–477

    Article  Google Scholar 

  • Ryan E, Reid GE (2016) Chemical derivatization and ultrahigh resolution and accurate mass spectrometrystrategies for “Shotgun” Lipidome analysis. Acc Chem Res 49:1596–1604

    Article  PubMed  CAS  Google Scholar 

  • Sajesh BV, Guppy BJ, McManus KJ (2013) Synthetic genetic targeting of genome instability in cancer. Cancers 5:739–761

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Sandercock AM, Rust S, Guillard S, Sachsenmeier KF, Holoweckyj N, Hay C, Flynn M, Huang Q, Yan K, Herpers B, Price LS, Soden J, Freeth J, Jermutus L, Hollingsworth R, Minter R (2015) Identification of anti-tumour biologics using primary tumour models, 3-D phenotypic screening and image-based multi-parametric profiling. Mol Cancer 14:147

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Santoyo G, Moreno-Hagelsieb G, Orozco-Mosqueda Mdel C, Glick BR (2016) Plant growth-promoting bacterial endophytes. Microbiol Res 183:92–99

    Article  PubMed  CAS  Google Scholar 

  • Sarasan M, Puthumana J, Job N, Han J, Lee JS, Philip R (2017) Marine algicolous endophytic fungi-A promising drug resource of the era. J Microbiol Biotechnol 27:1039–1052

    PubMed  Google Scholar 

  • Saultz JN, Garzon R (2016) Acute myeloid leukemia: a concise review. J Clin Med 5:E33. https://doi.org/10.3390/jcm5030033

    Article  PubMed  CAS  Google Scholar 

  • Scheurer ME, Bondy ML, Aldape KD, Albrecht T, El-Zein R (2008) Detection of human CMV in different histological types of glioma. Acta Neuropathol 116:79–86

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Sengupta S, Ganguli S, Singh PK (2017) Metagenome analysis of the root endophytic microbial community of Indian rice (O. sativa L.) Genom Data 12:41–43

    Article  PubMed  PubMed Central  Google Scholar 

  • Shanmugam MK, Lee JH, Chai EZ, Kanchi MM, Kar S, Arfuso F, Dharmarajan A, Kumar AP, Ramar PS, Looi CY, Mustafa MR, Tergaonkar V, Bishayee A, Ahn KS, Sethi G (2016) Cancer prevention and therapy through the modulation of transcription factors by bioactive natural compounds. Semin Cancer Biol 41:35–47

    Article  CAS  Google Scholar 

  • Sharma SB, Gupta R (2015) Drug development from natural resource: a systematic approach. Mini Rev Med Chem 15:52–57

    Article  PubMed  CAS  Google Scholar 

  • Sheibani-Tezerji R, Rattei T, Sessitsch A, Trognitz F, Mitter B (2015) Transcriptome profiling of the endophyte Burkholderia phytol firmans PsJN indicates sensing of the plant environment and drought stress. mBio 6:e00621–e00615. https://doi.org/10.1128/mBio.0062115

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Shen SY, Fulthorpe R (2015) Seasonal variation of bacterial endophytes in urban trees. Front Microbiol 6:427. https://doi.org/10.3389/fmicb.2015.00427

    Article  PubMed  PubMed Central  Google Scholar 

  • Shendure J, Ji H (2008) Next-generation DNA sequencing. Nat Biotechnol 26:1135–1145

    Article  PubMed  CAS  Google Scholar 

  • Siegel RL, Miller KD, Jemal A (2017) Cancer statistics, 2017. CA Cancer J Clin 67:7–30

    Article  PubMed  Google Scholar 

  • Simon C, Daniel R (2017) Construction of small-insert and large-insert metagenomic libraries. In: Streit WR, Daniel R (eds) Metagenomics: methods and protocols. Humana Press, New York, pp 1–12

    Google Scholar 

  • Singh A, Yadav M, Singh P, Srivastava R, Singh N, Verma R, Singh RK (2014) N-heterocyclic analogs as peptide deformylase inhibitors: molecular modeling, synthesis, and antibacterial evaluation. BMC Infect Dis 14:E18. https://doi.org/10.1186/1471-2334-14-S3-E18

    Article  PubMed Central  Google Scholar 

  • Solyanik GI (2010) Multifactorial nature of tumor drug resistance. Exp Oncol 32:181–185

    PubMed  CAS  Google Scholar 

  • Specian V, Sarragiotto MH, Pamphile JA, Clemente E (2012) Chemical characterization of bioactive compounds from the endophytic fungus Diaporthe helianthus isolated from Luehea divaricata. Braz J Microbiol 43:1174–1182

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Staniek A, Woerdenbag HJ, Kayser O (2008) Endophytes: exploiting biodiversity for the improvement of natural product-based drug discovery. J Plant Interact 3:75–93

    Article  CAS  Google Scholar 

  • Stege A, Krühn A, Lage H (2010) Overcoming multidrug resistance by RNA interference. Methods Mol Biol 596:447–465

    Article  PubMed  CAS  Google Scholar 

  • Stepniewska Z, Kuzniar A (2013) Endophytic microorganisms-promising applications in bioremediation of greenhouse gases. Appl Microbiol Biotechnol 97:9589–9596

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Sternson LA, Stobaugh JF, Reid TJ, de Montigny P (1988) Chemical derivatization as a strategy to enhance detectability of agents used in cancer management. J Pharm Biomed Anal 6:657–668

    Article  PubMed  CAS  Google Scholar 

  • Stierle AA, Stierle DB (2015) Bioactive secondary metabolites produced by the fungal endophytes of conifers. Nat Prod Commun 10:1671–1682

    PubMed  PubMed Central  Google Scholar 

  • Stierle A, Strobel GA, Stierle D (1993) Taxol and taxane production by Taxomyces andreanae, an endophytic fungus of Pacific yew. Science 260:214–216

    Article  PubMed  CAS  Google Scholar 

  • Stolnicu S, Moldovan C, Podoleanu C, Georgescu R (2015) Mesenchymal tumors and tumor-like lesions of the breast: a contemporary approach review. Ann Pathol 35:15–31

    Article  PubMed  Google Scholar 

  • Strobel GA, Daisy B, Castillo U, Harper J (2004) Natural products from endophytic microorganisms. J Nat Prod 67:257–268

    Article  PubMed  CAS  Google Scholar 

  • Sun X, Guo LD (2012) Endophytic fungal diversity: a review of traditional and molecular techniques. Mycology 3:65–76

    Google Scholar 

  • Sun Q, Zhou Z, Qiu N, Shen Y (2017) Rational design of cancer nanomedicine: nano properly integration and synchronization. Adv Mater 29:201606628. https://doi.org/10.1002/adma.201606628

    Article  CAS  Google Scholar 

  • Suryanarayanan TS (2013) Endophyte research: going beyond isolation and metabolite documentation. Fungal Ecol 6:561–568

    Article  Google Scholar 

  • Suryanarayanan TS, Thirunavukkarasu N, Govindarajulu MB, Sasse F, Jansen R, Mural TS (2009) Fungal endophytes and bioprospecting. Fungal Biol Rev 23:9–19

    Article  Google Scholar 

  • Swamy MK, Akthar MS, Sinniah UR (2016a) Root exudates and their molecular interactions with rhizospheric microbes. In: Hakeem KR, Akhtar MS (eds) Plant, soil and microbes: volume 2: mechanisms and molecular interactions. Springer, Cham, pp 59–77

    Chapter  Google Scholar 

  • Swamy MK, Akthar MS, Sinniah UR (2016b) Response of PGPR and AM fungi toward growth and secondary metabolite production in medicinal and aromatic plants. In: Hakeem KR, Akhtar MS (eds) Plant, soil and microbes: volume 2: mechanisms and molecular interactions. Springer, Cham, pp 145–168

    Chapter  Google Scholar 

  • Szakacs G, Paterson JK, Ludwig JA, Booth-Genthe C, Gottesman MM (2006) Targeting multidrug resistance in cancer. Nat Rev Drug Discov 5:219–234

    Article  PubMed  CAS  Google Scholar 

  • Szakács G, Hall MD, Gottesman MM, Boumendjel A, Kachadourian R, Day BJ, Baubichon-Cortay H, Di Pietro A (2014) Targeting the achilles heel of multidrug-resistant cancer by exploiting the fitness cost of resistance. Chem Rev 114:5753–5774

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Tan PH, Ellis IO (2013) Myoepithelial and epithelial-myoepithelial, mesenchymal and fibroepithelial breast lesions: updates from the WHO classification of tumours of the breast 2012. J Clin Pathol 66:465–470

    Article  PubMed  CAS  Google Scholar 

  • Tan W, Mei H, Chao L, Liu T, Pan X, Shu M, Yang L (2013) Combined QSAR and molecule docking studies on predicting P-glycoprotein inhibitors. J Comput Aided Mol Des 27:1067–1073

    Article  PubMed  CAS  Google Scholar 

  • Tan BY, Acs G, Apple SK, Badve S, Bleiweiss IJ, Brogi E, Calvo JP, Dabbs DJ, Ellis IO, Eusebi V, Farshid G, Fox SB, Ichihara S, Lakhani SR, Rakha EA, Reis-Filho JS, Richardson AL, Sahin A, Schmitt FC, Schnitt SJ, Siziopikou KP, Soares FA, Tse GM, Vincent-Salomon A, Tan PH (2016) Phyllodes tumours of the breast: a consensus review. Histopathology 68:5–21

    Article  PubMed  PubMed Central  Google Scholar 

  • Tari LW (2012) The utility of structural biology in drug discovery. In: Tari LW (ed) Structure-based drug discovery, methods in molecular biology, vol 841. Springer, New York, pp 1–28

    Chapter  Google Scholar 

  • Tashiro E, Imoto M (2012) Target identification of bioactive compounds. Bioorg Med Chem 20:1910–1921

    Article  PubMed  CAS  Google Scholar 

  • Telerman A, Ofir R, Kashman Y, Elmann A (2017) 3,5,4′-trihydroxy-6,7,3′-trimethoxyflavone protects against β-amyloid-induced neurotoxicity through antioxidative activity and interference with cell signaling. BMC Complement Altern Med 17:332. https://doi.org/10.1186/s12906-017-1840-y

  • Teng YN, Sheu MJ, Hsieh YW, Wang RY, Chiang YC, Hung CC (2016) β-carotene reverses multidrug resistant cancer cells by selectively modulating human P-glycoprotein function. Phytomedicine 23:316–323. https://doi.org/10.1016/j.phymed.2016.01.008

    Article  PubMed  CAS  Google Scholar 

  • Thomas H, Coley HM (2003) Overcoming multidrug resistance in cancer: an update on the clinical strategy of inhibiting p-glycoprotein. Cancer Control 10:159–165

    Article  PubMed  Google Scholar 

  • Tian CF, Zhou YJ, Zhang YM, Li QQ, Zhang YZ, Li DF, Wang S, Wang J, Gilbert LB, Li YR, Chen WX (2012) Comparative genomics of rhizobia nodulating soybean suggests extensive recruitment of lineage specific genes in adaptations. Proc Natl Acad Sci USA 109:8629–8634

    Article  PubMed  PubMed Central  Google Scholar 

  • Tiwari AK, Sodani K, Dai CL, Ashby CR Jr, Chen ZS (2011) Revisiting the ABCs of multidrug resistance in cancer chemotherapy. Curr Pharm Biotechnol 12:570–594

    Article  PubMed  CAS  Google Scholar 

  • Torre LA, Bray F, Siegel RL, Ferlay J, Lortet-Tieulent J, Jemal A (2015) Global cancer statistics, 2012. CA Cancer J Clin 65:87–108

    Article  PubMed  Google Scholar 

  • Toyooka T (2017) Derivatization-based high-throughput bioanalysis by LC-MS. Anal Sci 33:555–564

    Article  CAS  Google Scholar 

  • Tsurumaru H, Okubo T, Okazaki K, Hashimoto M, Kakizaki K, Hanzawa E, Takahashi H, Asanome N, Tanaka F, Sekiyama Y, Ikeda S, Minamisawa K (2015) Metagenomic analysis of the bacterial community associated with the taproot of sugar beet. Microbes Environ 30:63–69

    Article  PubMed  PubMed Central  Google Scholar 

  • Tu Q, Yu H, He Z, Deng Y, Wu L, Van Nostrand JD, Zhou A, Voordeckers J, Lee YJ, Qin Y, Hemme CL, Shi Z, Xue K, Yuan T, Wang A, Zhou J (2014) GeoChip 4: a functional gene-array-based high-throughput environmental technology for microbial community analysis. Mol Ecol Resour 14:914–928

    PubMed  CAS  Google Scholar 

  • Turner TR, Ramakrishnan K, Walshaw J, Heavens D, Alston M, Swarbreck D, Osbourn A, Grant A, Poole PS (2013) Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants. ISME J 7:2248–2258

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Ullah MF (2008) Cancer multidrug resistance (MDR): a major impediment to effective chemotherapy. Asian Pac J Cancer Prev 9:1–6

    PubMed  Google Scholar 

  • Ullah S, Saeed M, Halimi SMA, Muhammad Imran Fakhri MI, Khan KM, Khan I, Perveen S (2016) Med Chem Res 25:1468–1475

    Article  CAS  Google Scholar 

  • Umashankar T, Govindappa M, Yarappa Lakshmikantha R, Padmalatha Rai S, Channabasava (2015) Isolation and characterization of coumarin isolated from endophyte, Alternaria species-1of Crotalaria pallida and its apoptotic action on hela cancer cell line. Metabolomics 5:158. https://doi.org/10.4172/2153-0769.1000158

    Article  Google Scholar 

  • van Hattum H, Waldmann H (2014) Biology-oriented synthesis: harnessing the power of evolution. J Am Chem Soc 136:11853–11859

    Article  PubMed  CAS  Google Scholar 

  • Vasundhara M, Kumar A, Reddy MS (2016) Molecular approaches to screen bioactive compounds from endophytic fungi. Front Microbiol 7:1774. https://doi.org/10.3389/fmicb.2016.01774

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Vega FE, Goettel MS, Blackwell M, Chandler D, Jackson MA, Keller S, Koike M, Maniania NK, Monzon A, Ownley BH, Pell JK, Rangel DEN, Roy HE (2009) Fungal entomopathogens: new insights on their ecology. Fungal Ecol 2:1–11

    Article  Google Scholar 

  • Vempati UD, Przydzial MJ, Chung C, Abeyruwan S, Mir A, Sakurai K, Visser U, Lemmon VP, Schüre SC (2012) Formalization, annotation and analysis of diverse drug and probe screening assay datasets using the BioAssay Ontology (BAO). PLoS One 7:e49198. https://doi.org/10.1371/journal.pone.0049198

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Venugopalan A, Srivastava S (2015) Endophytes as in vitro production platforms of high-value plant secondary metabolites. Biotechnol Adv 33:873–887

    Article  PubMed  Google Scholar 

  • Visser U, Abeyruwan S, Vempati U, Smith RP, Lemmon V, Schürer SC (2011) Bioassay Ontology(BAO): a semantic description of bioassays and high-throughput screening results. BMC Bioinform 12:257. https://doi.org/10.1186/1471-2105-12-257

    Article  Google Scholar 

  • Wang LW, Zhang YL, Lin FC, Hu YZ, Zhang CL (2011) Natural products with antitumor activity from endophytic fungi. Mini Rev Med Chem 11:1056–1074

    Article  PubMed  CAS  Google Scholar 

  • Wang D, Yang S, Tang F, Zhu H (2012) Symbiosis specificity in the legume: rhizobial mutualism. Cell Microbiol 14:334–342

    Article  PubMed  CAS  Google Scholar 

  • Wang L, Ma C, Wipf P, Liu H, Su W, Xie XQ (2013) Target hunter: an in silico target identification tool for predicting therapeutic potential of small organic molecules based on the chemogenomic database. AAPS J 15:395–406

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Wang X, Zhang X, Liu L, Xiang M, Wang W, Sun X, Che Y, Guo L, Liu G, Guo L, Wang C, Yin WB, Stadler M, Zhang X, Liu X (2015) Genomic and transcriptomic analysis of the endophytic fungus Pestalotiopsis fici reveals its lifestyle and high potential for synthesis of natural products. BMC Genomics 16:28. https://doi.org/10.1186/s12864-014-1190-9

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Wang L, Qiu P, Long X-F, Zhang S, Zeng ZG, Tian YQ (2016) Comparative analysis of chemical constituents, antimicrobial and antioxidant activities of ethylacetate extracts of Polygonum cuspidatum and its endophytic actinomycete, Streptomyces sp. A0916. Chin J Nat Med 14:117–123

    Article  PubMed  Google Scholar 

  • Wawer MJ, Li K, Gustafsdottir SM, Ljosa V, Bodycombe NE, Marton MA, Sokolnicki KL, Bray MA, Kemp MM, Winchester E, Taylor B, Grant GB, Hon CS, Duvall JR, Wilson JA, Bittker JA, Dančík V, Narayan R, Subramanian A, Winckler W, Golub TR, Carpenter AE, Shamji AF, Schreiber SL, Clemons PA (2014) Toward performance-diverse small-molecule libraries for cell-based phenotypic screening using multiplexed high-dimensional profiling. Proc Natl Acad Sci USA 111:10911–10916

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Webster NS, Thomas T (2016) The sponge hologenome. MBio 7:e00135–e00116. https://doi.org/10.1128/mBio.00135-16

    Article  PubMed  PubMed Central  Google Scholar 

  • Weinstock GM (2012) Genomic approaches to studying the human microbiota. Nature 489:250–256. https://doi.org/10.1038/nature11553

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Weishampel PA, Bedford BL (2006) Wetland dicots and monocots differ in colonization by arbuscular mycorrhizal fungi and dark septate endophytes. Mycorrhiza 16:495–502

    Article  PubMed  Google Scholar 

  • Wen PY, Macdonald DR, Reardon DA, Cloughesy TF, Sorensen AG, Galanis E, Degroot J, Wick W, Gilbert MR, Lassman AB, Tsien C, Mikkelsen T, Wong ET, Chamberlain MC, Stupp R, Lamborn KR, Vogelbaum MA, van den Bent MJ, Chang SM (2010) Updated response assessment criteria for high-grade gliomas: response assessment in neuro-oncology working group. J Clin Oncol 28:1963–1972

    Article  PubMed  Google Scholar 

  • Wetzel S, Bon RS, Kumar K, Waldmann H (2011) Biology-oriented synthesis. Angew Chem Int Ed Engl 50:10800–10826

    Article  PubMed  CAS  Google Scholar 

  • Wilson D (1995) Endophyte: the evolution of a term, and clarification of its use and definition. Oikos 73:274–276

    Article  Google Scholar 

  • Wiseman H, Kaur H, Halliwell B (1995) DNA damage and cancer: measurement and mechanism. Cancer Lett 93:113–120

    Article  PubMed  CAS  Google Scholar 

  • Wishart DS, Mandal R, Stanislaus A, Ramirez-Gaona M (2016) Cancer metabolomics and the human metabolome database. Metabolites 2:6. https://doi.org/10.3390/metabo6010010

    Article  CAS  Google Scholar 

  • Wisniewski-Dyé F, Vial L (2015) Cell-cell communication in Azospirillum and related PGPR. In: Dario CF, Creus YO, Cecilia M (eds) Handbook for Azospirillum, technical issues and protocols. Springer, New York, pp 263–285

    Google Scholar 

  • Wong IL, Chan KF, Tsang KH, Lam CY, Zhao Y, Chan TH, Chow LM (2009) Modulation of multidrug resistance Protein 1 (MRP1/ABCC1)-mediated multidrug resistance by bivalent Apigenin homodimers and their derivatives. J Med Chem 52:5311–5322

    Article  PubMed  CAS  Google Scholar 

  • Wright KM, Chapman S, McGeachy K, Humphris S, Campbell E, Toth IK, Holden NJ (2013) The endophytic lifestyle of Escherichia coli O157: H7: quantification and internal localization in roots. Phytopathology 103:333–340

    Article  PubMed  Google Scholar 

  • Wu CP, Ohnuma S, Ambudkar SV (2011) Discovering natural product modulators to overcome multidrug resistance in cancer chemotherapy. Curr Pharm Biotechnol 12:609–620

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Wu C, Gong MQ, Liu BY, Zhuo RX, Cheng SX (2017) Co-delivery of multiple drug resistance inhibitors by polymer/inorganic hybrid nanoparticles to effectively reverse cancer drug resistance. Colloids Surf B Biointerfaces 149:250–259

    Article  PubMed  CAS  Google Scholar 

  • Xu GB, He G, Bai HH, Yang T, Zhang GL, Wu LW, Li GY (2015) Indole alkaloids from Chaetomium globosum. J Nat Prod 78:1479–1485

    Article  PubMed  CAS  Google Scholar 

  • Xue X, Liang XJ (2012) Overcoming drug efflux-based multidrug resistance in cancer with nanotechnology. Chin J Cancer 31:100–109

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Yamakawa Y, Kusuhara M, Terashima M, Kinugasa Y, Sugino T, Abe M, Mochizuki T, Hatakeyama K, Kami K, Yamaguchi K (2017) CD44 variant 9 expression as a predictor of gastric cancer recurrence: Immunohistochemical and metabolomic analysis of surgically resected tissues. Biomed Res 38:41–52

    Article  PubMed  CAS  Google Scholar 

  • Yan JK, Pei JJ, Ma HL, Wang ZB, Liu YS (2017) Advances in antitumor polysaccharides from phellinus sensu lato: production, isolation, structure, antitumor activity, and mechanisms. Crit Rev Food Sci Nutr 57:1256–1269

    Article  PubMed  CAS  Google Scholar 

  • Yarla NS, Bishayee A, Sethi G, Reddanna P, Kalle AM, Dhananjaya BL, Dowluru KS, Chintala R, Duddukuri GR (2016) Targeting arachidonic acid pathway by natural products for cancer prevention and therapy. Semin Cancer Biol 40–41:48–81

    Article  PubMed  CAS  Google Scholar 

  • Yoo C, Park YS (2015) Companion diagnostics for the targeted therapy of gastric cancer. World J Gastroenterol 21:10948–10955

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Yu H, Zhang L, Li L, Zheng C, Guo L, Li W, Sun P, Qin L (2010) Recent developments and future prospects of antimicrobial metabolites produced by endophytes. Microbiol Res 165:437–449

    Article  PubMed  CAS  Google Scholar 

  • Yule KM, Miller TEX, Rudgers JA (2013) Costs, benefits, and loss of vertically transmitted symbionts affect host population dynamics. Oikos 122:1401–1410

    Google Scholar 

  • Zamioudis C, Pieterse CMJ (2012) Modulation of host immunity by beneficial microbes. Mol Plant-Microbe Interact 25:139–150

    Article  PubMed  CAS  Google Scholar 

  • Zander Balderud L, Murray D, Larsson N, Vempati U, Schürer SC, Bjäreland M, Engkvist O (2015) Using the BioAssay Ontology for analyzing high-throughput screening data. J Biomol Screen 20:402–415

    Article  PubMed  CAS  Google Scholar 

  • Zennaro L, Vanzani P, Nicolè L, Cappellesso R, Fassina A (2017) Metabonomics by proton nuclear magnetic resonance in human pleural effusions: a route to discriminate between benign and malignant pleural effusions and to target small molecules as potential cancer biomarkers. Cancer 125:341–348. https://doi.org/10.1002/cncy.21832

    Article  CAS  Google Scholar 

  • Zhang HW, Song YC, Tan RX (2006) Biology and chemistry of endophytes. Nat Prod Rep 23:753–771

    Article  PubMed  CAS  Google Scholar 

  • Zhang D, Ge H, Xie D, Chen R, Zou J-H, Tao X, Dai J (2013) Periconiasins A-C, new cytotoxic cytochalasans with an unprecedented 9/6/5 tricyclic ring system from endophytic fungus Periconia sp. Org Lett 15:1674–1677

    Article  PubMed  CAS  Google Scholar 

  • Zhang HW, Ying C, Bai XL (2014a) Advancement in endophytic microbes from medicinal plants. Int J Pharm Sci Res 5:1589–1600

    CAS  Google Scholar 

  • Zhang XY, Tang GL, Xu XY, Nong XH, Qi SH (2014b) Insights into deep-sea sediment fungal communities from the east Indian ocean using targeted environmental sequencing combined with traditional cultivation. PLoS One 9:e109118

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Zhang Y, Ling J, Yang Q, Wen C, Yan Q, Sun H, Van Nostrand JD, Shi Z, Zhou J, Dong J (2015) The functional gene composition and metabolic potential of coral-associated microbial communities. Sci Rep 5:16191. https://doi.org/10.1038/srep16191

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Zhang CG, Zhu WJ, Liu Y, Yuan ZQ, Yang SD, Chen WL, Li JZ, Zhou XF, Liu C, Zhang XN (2016) Novel polymer micelle mediated co-delivery of doxorubicin and P-glycoprotein siRNA for reversal of multidrug resistance and synergistic tumor therapy. Sci Rep 6:23859. https://doi.org/10.1038/srep23859

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Zhang MM, Qiao Y, Ang EL, Zhao H (2017) Using natural products for drug discovery: the impact of the genomics era. Expert Opin Drug Discovery 12:475–487

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Zhao Y, He M, Ding J, Xi Q, Loake GJ, Zheng W (2016) Regulation of anticancer styrylpyrone biosynthesis in the medicinal mushroom Inonotus obliquus requires thioredoxin-mediated transnitrosylation of s-nitrosoglutathione reductase. Sci Rep 6:37601. https://doi.org/10.1038/srep37601

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Zhou B, Xiao JF, Tuli L, Ressom HW (2012) LC-MS based metabolomics. Mol Biosyst 8:470–481

    Article  PubMed  CAS  Google Scholar 

  • Zhou Z, Han Z, Zeng Y, Zhang M, Cui Y, Xu L, Zhang L (2014) Chinese FDA approved fungal glycan-based drugs: an overview of structures, mechanisms and clinical related studies. Transl Med 4:141. https://doi.org/10.4172/2161-1025.1000141

    Article  Google Scholar 

  • Zhou J, He Z, Yang Y, Deng Y, Tringe SG, Alvarez-Cohen L (2015) High- throughput metagenomic technologies for complex microbial community analysis: open and closed formats. MBio 6:e02288–e02214

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Zhou R, Han YJ, Zhang MH, Zhang KR, Ng TB, Liu F (2017) Purification and characterization of a novel ubiquitin-like antitumor protein with hemagglutinating and deoxyribonuclease activities from the edible mushroom Ramaria botrytis. AMB Exp 7:47. https://doi.org/10.1186/s13568-017-0346-9

  • Zinzi L, Capparelli E, Cantore M, Contino M, Leopoldo M, Colabufo NA (2014) Small and innovative molecules as a new strategy to revert MDR. Front Oncol 4:2. https://doi.org/10.3389/fonc.2014.00002

    Article  PubMed  PubMed Central  Google Scholar 

  • Zoete V, Daina A, Bovigny C, Michielin OJ (2016) Swisssimilarity: a web tool for low to ultra high throughput ligand-based virtual screening. Chem Inf Model 56:1399–1404

    Article  CAS  Google Scholar 

Download references

Acknowledgments

We thank the editors and the all anonymous reviewers for their constructive comments, which helped us to improve this chapter.

Conflict of Interest

The author certifies that there is no conflict of interest with any financial organization regarding the material discussed in this chapter.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Julio Alves Cardoso Filho .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2018 Springer Nature Singapore Pte Ltd.

About this chapter

Check for updates. Verify currency and authenticity via CrossMark

Cite this chapter

Filho, J.A.C. (2018). Endophytic Microbes as a Novel Source for Producing Anticancer Compounds as Multidrug Resistance Modulators. In: Akhtar, M., Swamy, M. (eds) Anticancer Plants: Natural Products and Biotechnological Implements. Springer, Singapore. https://doi.org/10.1007/978-981-10-8064-7_15

Download citation

Publish with us

Policies and ethics