Abstract
Endophytes are a range of microorganisms which inhabit the plant tissues, establishing an association with their hosts during a period for nearly or all their life without causing any apparent damage. It is known that some of these microorganisms have the potential to produce a diverse range of molecules that may be a reservoir of pharmaceutical drugs with anticancer activity. Cancer is a major trouble public health in all countries of the world, and this disease has higher mortality rate. Cancer is a name given to a complex disease, which is distinguished by the development and expansion of untypical cells and can lead to death. Nowadays the multidrug resistance (MDR) in cancer chemotherapy, remains a challenge to human and animal health around the world, which in several cases makes treatment inefficient. As a result, an increased number of strategies have been encouraged in search of MDR modulators (drugs that overcome MDR capacity) from various natural resources including endophyte-derived compounds. Thus, the aim of this chapter is to present the current status of several strategies adopted to promote the identification of some of these bioactive endophyte-derived compounds such as flavonoids, coumarins, polysaccharides, and β-glucans and to demonstrate their pharmaceutical potential as MDR modulators.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Abarrategi A, Tornin J, Martinez-Cruzado L, Hamilton A, Martinez-Campos E, Rodrigo JP, González MV, Baldini N, Garcia-Castro J, Rene Rodriguez R (2016) Osteosarcoma: cells-of-origin, cancer stem cells, and targeted therapies. Stem Cells Int 2016:3631764. https://doi.org/10.1155/2016/3631764
Abdallah HM, Al-Abd AM, El-Dine RS, El-Halawany AM (2015) P-glycoprotein inhibitors of natural origin as potential tumor chemo-sensitizers: a review. J Adv Res 6:45–62
Abdolmaleki A, Ghasemi JB (2017) Dual-acting of hybrid compounds – a new dawn in the discovery of multitarget drugs: lead generation approaches. Curr Top Med Chem 17:1096–1114
Abeyruwan S, Vempati UD, Küçük-McGinty H, Visser U, Koleti A, Mir A, Sakurai K, Chung C, Bittker JA, Clemons PA, Brudz S, Siripala A, Morales AJ, Romacker M, Twomey D, Bureeva S, Lemmon V, Schürer SC (2014) Evolving BioAssay Ontology (BAO): modularization, integration and applications. J Biomed Semantics 3:S5. https://doi.org/10.1186/2041-1480-5-S1-S5
Aguiar-Pulido V, Huang W, Suarez-Ulloa V, Cickovski T, Mathee K, Narasimhan G (2016) Metagenomics, metatranscriptomics, and metabolomics approaches for microbiome analysis. Evol Bioinform 12:5–16
Ahemad M, Kibret M (2014) Mechanisms and applications of plant growth promoting rhizobacteria: a current perspective. J King Saud Univ Sci 26:1–20
Ahlbom A, Feychting M, Gren A Kheifets L, Savitz DA, Swerdlow AJ (2009) Epidemiologic evidence on mobile phones and tumor risk: a review. Epidemiology 20:639–652
Ahmad J, Akhter S, Nigel H, Kamal GMM, Midoux P, Pichon C (2016) Engineered nanoparticles against MDR in cancer: the state of the art and its prospective. Curr Pharm Des 22:4360–4373
Ahn K (2017) The worldwide trend of using botanical drugs and strategies for developing global drugs. BMB Rep 50:111–116
Akhtar MS, Panwar J, Abdullah SNA, Siddiqui Y, Swamy MK, Ashkani S (2015) Biocontrol of plant parasitic nematodes by fungi: efficacy and control strategies. In: Meghvanshi MK, Varma A (eds) Organic amendments and soil suppressiveness in plant disease management, Soil biology, vol 46. Springer, Cham, pp 219–247
Alain K, Querellou J (2009) Cultivating the uncultured: limits, advances and future challenges. Extremophiles 13:583–594
Aller SG, Yu J, Ward A, Weng Y, Chittaboina S, Zhuo R, Harrell PM, Trinh YT, Zhang Q, Urbatsch IL, Chang G (2009) Structure of P-glycoprotein reveals a molecular basis for poly-specific drug binding. Science 323:1718–1722
Al-Massarani AM (2014) Phytochemical and biological properties of sesquiterpene constituents from the marine red seaweed Laurencia: a review. Nat Prod Chem Res 2:147. https://doi.org/10.4172/2329-6836.1000147
Al-Quteimat OM, Al-Badaineh MA (2014) Intraperitoneal chemotherapy: rationale, applications, and limitations. J Oncol Pharm Pract 20:369–380. https://doi.org/10.1177/1078155213506244
Altieri F, Grillo C, Maceroni M, Chichiarelli S (2008) DNA damage and repair: from molecular mechanisms to health implications. Antioxid Redox Signal 10:891–938
Aly AH, Debbab A, Kjer J, Proksch P (2010) Fungal endophytes from higher plants: a prolific source of phytochemicals and other bioactive natural products. Fungal Divers 41:1–16
Aly AH, Debbab A, Proksch P (2011) Fungal endophytes: unique plant inhabitants with great promises. Appl Microbiol Biotechnol 90:829–1845. https://doi.org/10.1007/s00253-011-3270-y
Aly AH, Debbab A, Proksch P (2013) Fungal endophytes-secret producers of bioactive plant metabolites. Pharmazie 68:499–505
Amin ML (2013) P-glycoprotein inhibition for optimal drug delivery. Drug Target Insights 13:727–734
Andreote FD, Gumiere T, Durrer A (2014) Exploring interactions of plant microbiomes. Sci Agric 71:528–539
Andrews JH, Harris RF (2000) The ecology and biogeography of microorganisms of plant surfaces. Annu Rev Phytopathol 38:145–180
Antipova TV, Zhelifonova VP, Baskunov BP, Ozerskaia SM, Ivanushkina NE, Kozlovskiĭ AG (2011) New producers of biologically active compounds-fungal strains of the genus Penicillium isolated from permafrost. Prikl Biokhim Mikrobiol 47:318–323
Arai M (2016) Exploring new drug targets through the identification of target molecules of bioactive natural products. Yakugaku Zasshi 136:669–676
Arias JL (2008) Novel strategies to improve the anticancer action of 5-fluorouracil by using drug delivery systems. Molecules 13:2340–2369
Armitage EG, Barbas C (2014) Metabolomics in cancer biomarker discovery: current trends and future perspectives. J Pharm Biomed Anal 87:218–228
Arnold AE (2005) Diversity and ecology of fungal endophytes in tropical forests. In: Deshmukh D (ed) Current trends in mycological research. Oxford & IBH Publishing, New Delhi, pp 49–68
Atkins C, Evans CW, White EL, Noah JW (2012) Screening methods for influenza antiviral drug discovery. Expert Opin Drug Discovery 7:429–438
Au JL, Lu Z, Wientjes MG (2015) Versatility of particulate carriers: development of pharmacodynamically optimized drug-loaded microparticles for the treatment of peritoneal cancer. AAPS J 17:1065–1079
Avinash J, Vinay S, Jha K, Das D, Goutham BS, Kumar G (2016) The unexplored anticaries potential of shiitake mushroom. Pharmacogn Rev 10:100–104
Backshall A, Sharma R, Clarke SJ, Keun HC (2011) Pharmacometabonomic profiling as a predictor of toxicity in patients with inoperable colorectal cancer treated with capecitabine. Clin Cancer Res 17:3019–3028
Baldan E, Nigris S, Populin F, Zottini M, Squartini A, Baldan B (2014) Identification of culturable bacterial endophyte community isolated from tissues of Vitis vinifera “Gloria”. Plant Biosyst 148:508–516
Balderud LZ, Murray D, Larsson N, Vempati U, Schürer SC, Bjäreland M, Engkvist O (2015) Using the BioAssay Ontology for analyzing high-throughput screening data. J Biomol Screen 20:402–415
Balmith M, Faya M, Soliman ME (2017) Ebola virus: a gap in drug design and discovery – experimental and computational perspective. Chem Biol Drug Des 89:297–308
Barot KP, Jain SV, Kremer L, Singh S, Ghate MD (2015) Recent advances and therapeutic journey of coumarins: current status and perspectives. Med Chem Res 24:2771–2798
Bates S, Kang M, Meadows B, Bakke S, Choyke P, Merino M, Goldspiel B, Chico I, Smith T, Chen C, Robey R, Bergan R, Figg WD, Fojo T (2001) A phase I study of infusional vinblastine in combination with the P-glycoprotein antagonist PSC 833 (valspodar). Cancer 92:1577–1590
Bhardwaj A, Agrawal P (2014) A review fungal endophytes: as a storehouse of bioactive compound. World. J Pharm Pharm Sci 3:228–237
Bianchini LF, Arruda MFC, Vieira SR, Campelo PMS, Grégio AMT, Rosa EAR (2015) Microbial biotransformation to obtain new antifungals. Front Microbiol 6:1433. https://doi.org/10.3389/fmicb.2015.01433
Bingol K, Bruschweiler-Li L, Yu C, Somogyi A, Zhang F, Brüschweiler R (2015) Metabolomics beyond spectroscopic databases: a combined MS/NMR strategy for the rapid identification of new metabolites in complex mixtures. Anal Chem 87:3864–3870
Bingol K, Bruschweiler-Li L, Li D, Zhang B, Xie M, Brüschweiler R (2016) Emerging new strategies for successful metabolite identification in metabolomics. Bioanalysis 8:557–573. https://doi.org/10.4155/bio-2015-0004
Binkhathlan Z, Lavasanifar A (2013) P-glycoprotein inhibition as a therapeutic approach for overcoming multidrug resistance in cancer: current status and future perspectives. Curr Cancer Drug Targets 13:326–346
Bishayee A, Sethi G (2016) Bioactive natural products in cancer prevention and therapy: progress and promise. Semin Cancer Biol 41:1–3. https://doi.org/10.1016/j.semcancer.2016.08.006
Blakeley J (2008) Drug delivery to brain tumors. Curr Neurol Neurosci Rep 8:235–241
Bon RS, Waldmann H (2010) Bioactivity-guided navigation of chemical space. Acc Chem Res 43:1103–1114
Bourne DG, Morrow KM, Webster NS (2016) Insights into the coral microbiome: underpinning the health and resilience of reef ecosystems. Annu Rev Microbiol 70:317–340
Brigger I, Dubernet C, Couvreur P (2002) Nanoparticles in cancer. Adv Drug Deliv Rev 54:631–651
Broekgaarden M, Weijer R, van Gulik TM, Hamblin MR, Heger M (2015) Tumor cell survival pathways activated by photodynamic therapy: a molecular basis for pharmacological inhibition strategies. Cancer Metastasis Rev 34:643–690
Brown WR, Ahnen DJ (2015) The international health care burden of cancers of the gastrointestinal tract and liver. Cancer Res Front 1:1–9
Brusotti G, Cesari I, Dentamaro A, Caccialanza G, Massolini G (2014) Isolation and characterization of bioactive compounds from plant resources: the role of analysis in the ethnopharmacological approach. J Pharm Biomed Anal 87:218–228
Cagnetta A, Adamia S, Acharya C, Patrone F, Miglino M, Nencioni A, Gobbi M, Cea M (2014) Role of genotype-based approach in the clinical management of adult acute myeloid leukemia with normal cytogenetics. Leuk Res 38:649–659
Callaghan R, Luk F, Bebawy M (2014) Inhibition of the multidrug resistance P-glycoprotein: time for a change of strategy. Drug Metab Dispos 42:623–631
Caporaso JG, Lauber CL, Walters WA, Berg-Lyons D, Huntley J, Fierer N, Owens SM, Betley J, Fraser L, Bauer M, Gormley N, Gilbert JA, Smith G, Knight R (2012) Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms. ISME J 6:1621–1624
Cardoso Filho JA, Pascholati SF, Sobrinho RR (2016) Mycorrhizal association and their role in plant disease protection. In: Hakeem KR, Akhtar MS (eds) Plant, soil, and microbes: mechanisms and molecular interactions, vol 2. Springer, Cham, pp 95–143
Carlson EE (2010) Natural products as chemical probes. ACS Chem Biol 5:639–653
Carrano L, Marinelli F (2015) The relevance of chemical dereplication in microbial natural product screening. J Appl Bioanal 1:55–67
Ceder J, Elgqvist J (2017) Targeting prostate cancer stem cells with alpha-particle therapy. Front Oncol 6:273. https://doi.org/10.3389/fonc.2016.00273
Chabner BA, Roberts TG Jr (2005) Timeline: chemotherapy and the war on cancer. Nat Rev Cancer 5:65–72
Chandra S (2012) Endophytic fungi: novel sources of anticancer lead molecules. Appl Microbiol Biotechnol 95:47–59
Chang J, Kwon HJ (2016) Discovery of novel drug targets and their functions using phenotypic screening of natural products. J Ind Microbiol Biotechnol 43:221–231
Chaparro JM, Badri DV, Vivanco JM (2014) Rhizosphere microbiome assemblage is affected by plant development. ISME J 8:790–803
Charlop-Powers Z, Owen JG, Reddy BVB, Ternei MA, Guimarães DO, de Frias UA, Pupo MT, Seepe P, Feng Z, Brady SF (2015) A global biogeographic sampling of bacterial secondary metabolism. eLife 4:e05048. https://doi.org/10.7554/eLife.05048
Chaudhary DK, Dahal RH (2017) DNA bar-code for identification of microbial communities: a mini review. EC Microbiol 6:219–224
Chen C, Zhou J, Ji C (2010) Quercetin: a potential drug to reverse multidrug resistance. Life Sci 87:333–338
Chen J, Zhang XD, Jiang Z (2013) The application of fungal β-glucans for the treatment of colon cancer. Anticancer Agents Med Chem 13:725–730
Chen T, Zhao J, Ma J (2015) Web resources for mass spectrometry-based proteomics. Genomics Proteomics Bioinformatics 13:36–39
Chen H, Shen J, Choy E, Hornicek FJ, Duan Z (2016a) Targeting protein kinases to reverse multidrug resistance in sarcoma. Cancer Treat Rev 43:8–18
Chen L, Zhang QY, Jia M, Ming QL, Yue W, Rahman K, Qin LP, Han T (2016b) Endophytic fungi with antitumor activities: their occurrence and anticancer compounds. Crit Rev Microbiol 42:454–473
Cheng KW, Wong CC, Wang M, He QY, Chen F (2010) Identification and characterization of molecular targets of natural products by mass spectrometry. Mass Spectrom Rev 29:126–155
Cherigo L, Lopez D, Martinez-Luis S (2015) Marine natural products as breast cancer resistance protein inhibitors. Mar Drugs 13:2010–2029
Cheung RC, Ng TB, Wong JH, Chen Y, Chan WY (2016) Marine natural products with anti-inflammatory activity. Appl Microbiol Biotechnol 100:1645–1666
Chiba T, Tsuchiya T, Mori R, Shimokawa I (2012) Protein reporter bioassay systems for the phenotypic screening of candidate drugs: a mouse platform for anti-aging drug screening. Sensors 12:1648–1656
Cho YS, Kwon HJ (2012) Identification and validation of bioactive small molecule target through phenotypic screening. Bioorg Med Chem 20:1922–1928
Choi YH, Yu AM (2014) ABC transporters in multidrug resistance and pharmacokinetics, and strategies for drug development. Curr Pharm Des 20:793–807
Christina A, Christapher V, Bhore SJ (2013) Endophytic bacteria as a source of novel antibiotics: an overview. Pharmacogn Rev 7:11–16
Cichonska A, Rousu J, Aittokallio T (2015) Identification of drug candidates and repurposing opportunities through compound-target interaction networks. Expert Opin Drug Discovery 10:1333–1345
Colabufo NA, Berardi F, Cantore M, Contino M, Inglese C, Niso M, Perrone R (2010) Perspectives of P-glycoprotein modulating agents in oncology and neurodegenerative diseases: pharmaceutical, biological, and diagnostic potentials. J Med Chem 53:1883–1897
Colby AH, Oberlies NH, Pearce CJ, Herrera VL, Colson YL, Grinstaff MW (2017) Nanoparticle drug delivery systems for peritoneal cancers: a case study of the design, characterization, and development of the expansile nanoparticle. Rev Nanomed Nanobiotechnol 9:3. https://doi.org/10.1002/wnan.1451
Collins I, Jones AM (2014) Diversity oriented synthetic strategies applied to cancer chemical biology and drug discovery. Molecules 19:17221–17255
Conti P, Tamborini L, Pinto A, Blondel A, Minoprio P, Mozzarelli A, De Micheli C (2011) Drug discovery targeting amino acid racemases. Chem Rev 11:6919–6946
Cragg GM, Newman DJ (2013) Natural products: a continuing source of novel drug leads. Biochim Biophys Acta 1830:3670–3695
Cripe LD, Uno H, Paietta EM, Litzow MR, Ketterling RP, Bennett JM, Rowe JM, Lazarus HM, Luger S, Tallman MS (2010) Zosuquidar, a novel modulator of P-glycoprotein, does not improve the outcome of older patients with newly diagnosed acute myeloid leukemia: a randomized, placebo-controlled trial of the eastern cooperative oncology group 3999. Blood 116:4077–4085
Croes S, Weyens N, Janssen J, Vercampt H, Colpaert JV, Carleer R, Vangronsveld J (2013) Bacterial communities associated with Brassica napus L. grown on trace element contaminated and non-contaminated fields: a genotypic and phenotypic comparison. Microb Biotechnol 6:371–384
Crutchfield CA, Thomas SN, Sokoll LJ, Chan DW (2016) Advances in mass spectrometry-based clinical biomarker discovery. Clin Proteomics 13:1. https://doi.org/10.1186/s12014-015-9102-9
Cuadros-Orellana S, Leite LR, Smith A, Medeiros JD, Badotti F, Fonseca PLC, Vaz ABM, Oliveira G, Góes-Neto A (2013) Assessment of fungal diversity in the environment using metagenomics: a decade in review. Fungal Genom Biol 3:110. https://doi.org/10.4172/2165-8056.1000110
Cui H, Zhang AJ, Chen M, Liu JJ (2015) ABC transporter inhibitors in reversing multidrug resistance to chemotherapy. Curr Drug Targets 16:1356–1371
Darby RA, Callaghan R, Mcmahon RM (2011) P-glycoprotein inhibition; the past, the present and the future. Curr Drug Metab 12:722–731
de Bary A (1866) Morphologie and physiologie der pilze, flechten and myxomyceten. Holfmeister’s handbook of physiological botany, vol 2. Leipzig, p 334
de Souza SFL, Romão-Dumaresq AS, Lacava PT, Harakava R, Azevedo JL, de Melo IS, Pizzirani-Kleiner AA (2013) Species diversity of culturable endophytic fungi from Brazilian mangrove forests. Curr Genet 59:153–166
Demain AL (2014) Importance of microbial natural products and the need to revitalize their discovery. J Ind Microbiol Biotechnol 41:185–201
Deng Y, Yang F, Cocco E, Song E, Zhang J, Cui J, Mohideen M, Bellone S, Santin AD, Saltzman WM (2016) Improved I.P. drug delivery with bioadhesive nanoparticles. Proc Natl Acad Sci USA 113:11453–11458
Deshmukh SK, Verekar SA, Bhave SV (2015) Endophytic fungi: a reservoir of antibacterials. Front Microbiol 5:715. https://doi.org/10.3389/fmicb.2014.00715
Dinic J, Podolski-Renic A, Stankovic T, Bankovic J, Pesic M (2015) New approaches with natural product drugs for overcoming multidrug resistance in cancer. Curr Pharm Des 21:5589–5604
Doi H, Horiike N, Hiraoka A, Koizumi Y, Yamamoto Y, Hasebe A, Ichikawa S, Yano M, Miyamoto Y, Ninomiya T, Ishimaru Y, Miyagawa M, Takamura K, Kawasaki H, Kozuka T, Maeda T, Yoshino T (2008) Primary hepatic marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue type: case report and review of the literature. Int J Hematol 88:418–423
Doolittle E, Peiris PM, Doron G, Goldberg A, Tucci S, Rao S, Shah S, Sylvestre M, Govender P, Turan O, Lee Z, Schiemann WP, Efstathios Karathanasis E (2015) Spatiotemporal targeting of a dual-ligand nanoparticle to cancer metastasis. ACS Nano 9:8012–8021
Dutta D, Chandra K, Gogoi PR, Dutta P (2014) Endophytes: exploitation as a tool in plant protection. Braz Arch Biol Technol 57:621–629
Edwardson DW, Narendrula R, Chewchuk S, Mispel-Beyer K, Mapletoft JP, Parissenti AM (2015) Role of drug metabolism in the cytotoxicity and clinical efficacy of anthracyclines. Curr Drug Metab 16:412–426
Eevers N, Gielen M, Sánchez-López A, Jaspers S, White JC, Vangronsveld J, Weyens N (2015) Optimization of isolation and cultivation of bacterial endophytes through the addition of plant extract to nutrient media. Microb Biotechnol 8:707–715
Eid SY, El-Readi MZ, Fatani SH, Nour Eldin EEM, Wink M (2015) Natural products modulate the multifactorial multidrug resistance of cancer. Pharmacol Pharm 6:146–176
El-Araby ME, Omar AM, Khayat MT, Assiri HA, Al-Abd AM (2017) Molecular mimics of classic p-glycoprotein inhibitors as multidrug resistance suppressors and their synergistic effect on paclitaxel. PLoS One 12:e0168938. https://doi.org/10.1371/journal.pone.0168938
Elipe MVS (2003) Advantages and disadvantages of nuclear magnetic resonance spectroscopy as hyphenated technique. Anal Chim Acta 497:1–25
Everett JR (2015) Pharmacometabonomics in humans: a new tool for personalized medicine. Pharmacogenomics 16:737–754
Everett JR (2016) From metabonomics to pharmacometabonomics: the role of metabolic profiling in personalized medicine. Front Pharmacol 7:297. https://doi.org/10.3389/fphar.2016.00297
Everett JR, Loo RL, Pullen FS (2013) Pharmacometabonomics and personalized medicine. Ann Clin Biochem 50:523–545
Fanciullino R, Ciccolini J, Milano G (2013) Challenges, expectations and limits for nanoparticles-based therapeutics in cancer: a focus on nano-albumin-bound drugs. Crit Rev Oncol Hematol 88:504–513
Farrar K, Bryant D, Cope-Selby N (2014) Understanding and engineering beneficial plant-microbe interactions: plant growth promotion in energy crops. Plant Biotechnol J 12:1193–1206
Ferlay J, Soerjomataram I, Dikshit R, Eser S, Mathers C, Rebelo M, Parkin DM, Forman D, Bray F (2015) Cancer incidence and mortality worldwide: sources, methods and major patterns in GLOBOCAN 2012. Int J Cancer 136:E359–E386. https://doi.org/10.1002/ijc.29210
Fernando IP, Nah JW, Jeon YJ (2016) Potential anti-inflammatory natural products from marine algae. Environ Toxicol Pharmacol 48:22–30
Fierro-Cruz JE, Jiménez P, Coy-Barrera E (2017) Fungal endophytes isolated from Protium heptaphyllum and Trattinnickia rhoifolia as antagonists of Fusarium oxysporum. Rev Argent Microbiol 49:255–263
Finkel OM, Burch AY, Lindow SE, Post AF, Belkin S (2011) Geographical location determines the population structure in phyllosphere microbial communities of a salt-excreting desert tree. Appl Environ Microbiol 77:7647–7655
Firakova S, Sturdíkova M, Muckova M (2007) Bioactive secondary metabolites produced by microorganisms associated with plants. Biologia 62:251–257
Fortin S, Bérubé G (2013) Advances in the development of hybrid anticancer drugs. Expert Opin Drug Discovery 8:1029–1047
Fridlender M, Kapulnik Y, Koltai H (2015) Plant-derived substances with anti-cancer activity: from folklore to practice. Front Plant Sci 6:799. https://doi.org/10.3389/fpls.2015.00799
Friedman M (2016) Mushroom polysaccharides: chemistry and antiobesity, antidiabetes, anticancer, and antibiotic properties in cells, rodents, and humans. Foods 5:80. https://doi.org/10.3390/foods5040080
Gao D, Tao Y (2012) Current molecular biologic techniques for characterizing the environmental microbial community. Front Environ Sci Eng 6:82–97
Gazis R, Chaverri P (2010) Diversity of fungal endophytes in leaves and stems of wild rubber trees (Hevea brasiliensis) in Peru. Fungal Ecol 3:240–254
Genilloud O (2014) The re-emerging role of microbial natural products in antibiotic discovery. Antonie Van Leeuwenhoek 106:173–188. https://doi.org/10.1007/s10482-014-0204-6
Gika HG, Theodoridis GA, Plumb RS, Wilson ID (2014) Current practice of liquid chromatography-mass spectrometry in metabolomics and metabonomics. J Pharm Biomed Anal 87:12–25. https://doi.org/10.1016/j.jpba.2013.06.032
Gilbert SF, McDonald E, Boyle N, Buttino N, Gyi L, Mai M, Prakash N, Robinson J (2010) Symbiosis as a source of selectable epigenetic variation: taking the heat for the big guy. Philos Trans R Soc B 365:671–678
Girardin F (2006) Membrane transporter proteins: a challenge for CNS drug development. Dialogues Clin Neurosci 8:311–321
Goda K, Fenyvesi F, Bacsó Z, Nagy H, Márián T, Megyeri A, Krasznai Z, Juhász I, Vecsernyés M, Szabó G Jr (2006) Complete inhibition of P-glycoprotein by simultaneous treatment with a distinct class of modulators and the UIC2 monoclonal antibody. J Pharmacol Exp Ther 320:81–88
Gomes N, Lefranc F, Kijjoa A, Kiss R (2015) Can some marine-derived fungal metabolites become actual anticancer agents. Mar Drugs 13:3950–3991
Gorzelak MA, Asay AK, Pickles BJ, Simard SW (2015) Interplant communication through mycorrhizal networks mediates complex adaptive behavior in plant communities. AoB Plants 7:plv050. https://doi.org/10.1093/aobpla/plv050
Gouda S, Das G, Sen SK, Shin HS, Patra JK (2016) Endophytes: a treasure house of bioactive compounds of medicinal importance. Front Microbiol 7:1538. https://doi.org/10.3389/fmicb.2016.0153
Gourion B, Berrabah F, Ratet P, Stacey G (2015) Rhizobium-legume symbioses: the crucial role of plant immunity. Trends Plant Sci 20:186–194. https://doi.org/10.1016/j.tplants.2014.11.008
Gowda GAN, Raftery D (2013) Biomarker discovery and translation in metabolomics. Curr Metabolomics 1:227–240
Gray-Schopfer V, Wellbrock C, Marais R (2007) Melanoma biology and new targeted therapy. Nature 445:851–857
Griffiths WJ, Koal T, Wang Y, Kohl M, Enot DP, Deigner HP (2010) Targeted metabolomics for biomarker discovery. Angew Chem Int Ed Engl 49:542654–542645. https://doi.org/10.1002/anie.200905579
Gul S (2017) Epigenetic assays for chemical biology and drug discovery. Clin Epigenetics 9:41. https://doi.org/10.1186/s13148-017-0342-6
Gunatilaka AAL (2006) Natural products from plant-associated microorganisms: distribution, structural diversity, bioactivity, and implications of their occurrence. J Nat Prod 69:509–526
Gunji S, Obama K, Matsui M, Tabata Y, Sakai Y (2013) A novel drug delivery system of intraperitoneal chemotherapy for peritoneal carcinomatosis using gelatin microspheres incorporating cisplatin. Surgery 154:991–999
Gupta A, Chaphalkar SR (2015) Cancer constricting mankind from top 5 killer diseases. Micro Med 3:36–44
Gupta R, Gabrielsen B, Ferguson SM (2005) Nature’s medicines: traditional knowledge and intellectual property management. Case studies from the National Institutes of Health (NIH), USA. Curr Drug Discov Technol 2:203–219
Gupta VK, Bhalla Y, Jaitak V (2014) Impact of ABC transporters, glutathione conjugates in MDR and their modulation by flavonoids: an overview. Med Chem Res 23:1–15
Hagmann W, Faissner R, Schnölzer M, Löhr M, Jesnowski R (2010) Membrane drug transporters and chemoresistance in human pancreatic carcinoma. Cancers 3:106–125
Hardoim PR, Hardoim CCP, van Overbeek LS, van Elsas JD (2012) Dynamics of seed-borne rice endophytes on early plant growth stages. PLoS One 7:e30438. https://doi.org/10.1371/journal.pone.0030438
Hardoim PR, Van Overbeek LS, Berg G, Pirttila AM, Compant S, Campisano A, Doring M, Sessitsch A (2015) The hidden world within plants: ecological and evolutionary considerations for defining the functioning of microbial endophytes. Microbiol Mol Biol Rev 79:293–320. https://doi.org/10.1128/MMBR.00050-14
Harguindey S, Orive G, Luis Pedraz J, Paradiso A, Reshkin SJ (2005) The role of pH dynamics and the Na+/H+ antiporter in the etiopathogenesis and treatment of cancer. Two faces of the same coin-one single nature. Biochim Biophys Acta 1756:1–24
Hart CP (2005) Finding the target after screening the phenotype. Drug Discov Today 10:513–519
Hartel PH, Bratthauer G, Hartel JV, Fanburg-Smith JC (2011) Primary malignant fibrous histiocytoma (myxofibrosarcoma/pleomorphic sarcoma not otherwise specified) of the breast: a clinicopathologic study of 19 cases. Ann Diagn Pathol 15:407–413
Hartley SE, Gange AC (2009) Impacts of plant symbiotic fungi on herbivores: mutualism in a multitrophic context. Annu Rev Entomol 54:323–342
He Z, Deng Y, Van Nostrand JD, Tu Q, Xu M, Hemme CL, Li X, Wu L, Gentry TJ, Yin Y, Liebich J, Hazen TC, Zhou J (2010) GeoChip 3.0 as a high-throughput tool for analyzing microbial community composition, structure and functional activity. ISME J 4:1167–1179. https://doi.org/10.1038/ismej.2010.46
He SM, Li R, Kanwar JR, Zhou SF (2011) Structural and functional properties of human multidrug resistance protein 1 (MRP1/ABCC1). Curr Med Chem 18:439–481
He J, Tian N, Yang Y, Jin L, Feng X, Hua J, Lin S, Wang B, Li H, Wang J (2017) miR-185 enhances the inhibition of proliferation and migration induced by ionizing radiation in melanoma. Oncol Lett 13:2442–2448
Hebert PD, Cywinska A, Ball SL, deWaard JR (2003) Biological identifications through DNA barcodes. Proc Biol Sci 270:313–321
Herrera VL, Colby AH, Tan GA, Moran AM, O’Brien MJ, Colson YL, Ruiz-Opazo N, Grinstaff MW (2016) Evaluation of expansile nanoparticle tumor localization and efficacy in a cancer stem cell-derived model of pancreatic peritoneal carcinomatosis. Nanomedicine 11:1001–1115. https://doi.org/10.2217/nnm-2015-0023
Higginbotham SJ, Arnold AE, Ibañez A, Spadafora C, Coley PD, Kursar TA (2013) Bioactivity of fungal endophytes as a function of endophyte taxonomy and the taxonomy and distribution of their host plants. PLoS One 8:e73192. https://doi.org/10.1371/journal.pone.0073192
Higgins CF (2007) Multiple molecular mechanisms for multidrug resistance transporters. Nature 446:749–757
Hoffmann K, Bekeredjian R, Schmidt J, Büchler MW, Märten A (2009) Effects of the high-affinity peptide reversin 121 on multidrug resistance proteins in experimental pancreatic cancer. Tumor Biol 29:351–358
Hong J, Yang L, Zhang D, Shi J (2016) Plant metabolomics: an indispensable system biology tool for plant science. Int J Mol Sci 17:767–783. https://doi.org/10.3390/ijms17060767
Ibekwe NN, Ameh SJ (2015) Hyphenated techniques in liquid chromatography as current trends in natural products analysis. Int Res J Pure Appl Chem 7:132–149. https://doi.org/10.9734/IRJPAC/2015/14458
Imhoff JF (2016) Natural products from marine fungi still an underrepresented resource. Mar Drugs 16:19. https://doi.org/10.3390/md14010019
Isgut M, Rao M, Yang C, Subrahmanyam V, Rida PCG, Aneja R (2018) Application of combination high throughput phenotypic screening and target identification methods for the discovery of natural-product based combination drugs. Med Res Rev 38:504-524
Ito T, Masubuchi M (2014) Dereplication of microbial extracts and related analytical technologies. J Antibiot 67:353–360
Jain PK, Joshi H (2012) Coumarin: chemical and pharmacological profile. J Appl Pharm Sci 6:236–240. https://doi.org/10.7324/JAPS.2012.2643
Jain S, Abraham I, Carvalho P, Kuang YH, Shaala LA, Youssef DT, Avery MA, Chen ZS, El Sayed KA (2009) Sipholane triterpenoids: chemistry, reversal of ABCB1/ P-glycoprotein-mediated multidrug resistance, and pharmacophore modeling. J Nat Prod 72:1291–1298
Jemal A, Bray F, Center MM, Ferlay J, Ward E, Forman D (2011) Global cancer statistics. CA Cancer J Clin 61:69–90
Jia M, Chen L, Xin HL, Zheng CJ, Rahman K, Han T, Qin LP (2016) A friendly relationship between endophytic fungi and medicinal plants: a systematic review. Front Microbiol 7:906. https://doi.org/10.3389/fmicb.2016.00906
Jiang Y, Xiong X, Danska J, Parkinson J (2016) Metatranscriptomic analysis of diverse microbial communities reveals core metabolic pathways and microbiome specific functionality. Microbiome 4:2. https://doi.org/10.1186/s40168-015-0146-x
Jiang W, Gao L, Li P, Kan H, Qu J, Men L, Liu Z, Liu Z (2017) Metabonomics study of the therapeutic mechanism of fenugreek galactomannan on diabetic hyperglycemia in rats, by ultra-performance liquid chromatography coupled with quadrupole time-of-flight mass spectrometry. J Chromatogr B Anal Technol Biomed Life Sci 1044-1045:8–16. https://doi.org/10.1016/j.jchromb.2016.12.039
Jin L, Quan C, Hou X, Fan S (2016) Potential pharmacological resources: natural bioactive compounds from marine-derived fungi. Mar Drugs 14:76. https://doi.org/10.3390/md14040076
Johnson D, Gilbert L (2015) Interplant signaling through hyphal networks. New Phytol 205:1448–1453
Joo WD, Visintina I, Mora G (2013) Targeted cancer therapy-are the days of systemic chemotherapy numbered. Maturitas 76:308–314
Joseph B, Priya RM (2011) Bioactive compounds from endophytes and their potential in pharmaceutical effect: a review. Am J Biochem Mol Biol 1:291–309
Kandalaft LE, Singh N, Liao JB, Facciabene A, Berek JS, Powell DJ, Coukos G (2010) The emergence of immunomodulation: combinatorial immunochemotherapy opportunities for the next decade. Gynecol Oncol 116:222–233
Katiyar C, Gupta A, Kanjilal S, Katiyar S (2012) Drug discovery from plant sources: an integrated approach. Ayu 33:10–19
Katsila T, Spyroulias GA, Patrinos GP, Matsoukas MT (2016) Computational approaches for target identification and drug discovery. Comput Struct Biotechnol J 14:177–184
Kaul S, Gupta S, Ahmed M, Dhar MK (2012) Endophytic fungi from medicinal plants: a treasure hunt for bioactive metabolites. Phytochem Rev 11:487–505
Kaul S, Sharma T, Dhar MK (2016) Omics tools for better understanding the plant-endophyte interactions. Front Plant Sci 7:955. https://doi.org/10.3389/fpls.2016.00955
Kharwar RN, Mishra A, Gond SK, Stierle A, Stierle D (2011) Anticancer compounds derived from fungal endophytes: their importance and future challenges. Nat Prod Rep 28:1208–1228
Khoury JD, Catenacci DVT (2015) Next-generation companion diagnostics: promises, challenges, and solutions. Arch Pathol Lab Med 139:11–13
Kim B, Lee JW, Hong KT, Yu KS, Jang IJ, Park KD, Shin HY, Ahn HS, Cho JY, Kang HJ (2017) Pharmacometabolomics for predicting variable busulfan exposure in pediatric hematopoietic stem cell transplantation patients. Sci Rep 7:1711. https://doi.org/10.1038/s41598-017-01861-7
Kitagawa M, Ikeda S, Tashiro E, Soga T, Imoto M (2010) Metabolomic identification of the target of the Filopodia protrusion inhibitor Glucopiericidin A. Chem Biol 17:989–998. https://doi.org/10.1016/j.chembiol.2010.06.017
Knief C (2014) Analysis of plant-microbe interactions in the era of next-generation sequencing technologies. Front Plant Sci 5:216. https://doi.org/10.3389/fpls.2014.00216
Koehn FE (2008) High impact technologies for natural products screening. Prog Drug Res 65:177–210
Kralova J, Kolar M, Kahle M, Truksa J, Lettlova S, Balusikova K, Bartunek P (2017) Glycol porphyrin derivatives and temoporfin elicit resistance to photodynamic therapy by different mechanisms. Sci Rep 7:44497. https://doi.org/10.1038/srep44497
Kremb S, Voolstra CR (2017) High-resolution phenotypic profiling of natural products-induced effects on the single-cell level. Sci Rep 7:44472. https://doi.org/10.1038/srep44472
Kumar S, Pandey AK (2013) Chemistry and biological activities of flavonoids: an overview. Sci World J 2013:162750. https://doi.org/10.1155/2013/162750
Kumar PM, Soujanya KN, Ravikanth G, Vasudeva R, Ganeshaiah KN, Shaanker RU (2014) Rohitukine, a chromone alkaloid and a precursor of flavopiridol, is produced by endophytic fungi isolated from Dysoxylum binectariferum Hook. F. and Amoora rohituka (Roxb). Wight & Arn. Phytomedicine 21:541–546
Kumar KA, Renuka N, Pavithra G, Kumar GV (2015) Comprehensive review on coumarins: molecules of potential chemical and pharmacological interest. J Chem Pharm Res 7:67–81
Kuo MT (2009) Redox regulation of multidrug resistance in cancer chemotherapy: molecular mechanisms and therapeutic opportunities. Antioxid Redox Signal 11:99–133
Kusari S, Spiteller M (2011) Are we ready for industrial production of bioactiveplant secondary metabolites utilizing endophytes? Nat Prod Rep 28:1203–1207. https://doi.org/10.1039/c1np00030f
Kusari S, Hertweck C, Spiteller M (2012) Chemical ecology of endophytic fungi: origins of secondary metabolites. Chem Biol 19:792–798. https://doi.org/10.1016/j.chembiol.2012.06.004
Kusari S, Singh S, Jayabaskaran C (2014a) Rethinking production of Taxol® (paclitaxel) using endophyte biotechnology. Trends Biotechnol 32:304–311
Kusari S, Singh S, Jayabaskaran C (2014b) Biotechnological potential of plant-associated endophytic fungi: hope versus hype. Trends Biotechnol 32:297–303
Kushi LH, Doyle C, McCullough M, Rock CL, Demark-Wahnefried W, Bandera EV, Gapstur S, Patel AV, Andrews K, Gansler T (2012) American Cancer Society guidelines on nutrition and physical activity for cancer prevention: reducing the risk of cancer with healthy food choices and physical activity. CA Cancer J Clin 62:30–67
Lachance H, Wetzel S, Kumar K, Waldmann H (2012) Charting, navigating, and populating natural product chemical space for drug discovery. J Med Chem 55:5989–6001
Laroche O, Wood SA, Tremblay LA, Lear G, Ellis JI, Pochon X (2017) Metabarcoding monitoring analysis: the pros and cons of using co-extracted environmental DNA and RNA data to assess offshore oil production impacts on benthic communities. Peer J 5:e3347. https://doi.org/10.7717/peerj.3347
Larsson J, Gottfries J, Muresan S, Backlund A (2007) ChemGPS-NP: tuned for navigation in biologically relevant chemical space. J Nat Prod 70:789–794
Lei H, Hofferberth SC, Liu R, Colby A, Tevis KM, Catalano P, Grinstaff MW, Colson YL (2015) Paclitaxel-loaded expansile nanoparticles enhance chemotherapeutic drug delivery in mesothelioma 3-dimensional multicellular spheroids. J Thorac Cardiovasc Surg 149:1417–1424
Leonard GD, Polgar O, Bates SE (2002) ABC transporters and inhibitors: new targets, new agents. Curr Opin Investig Drugs 3:1652–1659
Li L, Zhang Q, Liu A, Li X, Zhou H, Liu Y, Yan B (2011) Proteome interrogation using nanoprobes to identify targets of a cancer-killing molecule. Am Chem Soc 133:6886–6889
Li X, Ian Y, Ang SX, Zhang YM, Qin JC (2013) Cytotoxic azaphilone alkaloids from Chaetomium globosum TY1. Bioorg Med Chem Lett 23:2945–2947
Lichtman MA (2010) Obesity and the risk for a hematological malignancy: leukemia, lymphoma, or myeloma. Oncologist 15:1083–1101
Lima AN, Philot EA, Trossini GH, Scott LP, Maltarollo VG, Honorio KM (2016) Use of machine learning approaches for novel drug discovery. Expert Opin Drug Discovery 11:225–239
Linardi RL, Natalin CC (2006) Multi-drug resistance (MDR1) gene and P-glycoprotein influence on pharmacokinetic and pharmacodynamics of therapeutic drugs. Cienc Rural 36:336–341
Lindequist U (2016) Marine derived pharmaceuticals challenges and opportunities. Biomol Ther 24:561–571
Ling V (1997) Multidrug resistance: molecular mechanisms and clinical relevance. Cancer Chemother Pharmacol 40:S3–S8
Lionta E, Spyrou G, Vassilatis DK, Cournia Z (2014) Structure-based virtual screening for drug discovery: principles, applications, and recent advances. Curr Top Med Chem 14:1923–1938
Liu R, Li X, Lam KS (2017) Combinatorial chemistry in drug discovery. Curr Opin Chem Biol 38:117–126
Loman NJ, Misra RV, Dallman TJ, Constantinidou C, Gharbia SE, Wain J, Pallen MJ (2012) Performance comparison of benchtop high throughput sequencing platforms. Nat Biotechnol 30:434–439
Long S, Sousa E, Kijjoa A, Pinto MM (2016) Marine natural products as models to circumvent multidrug resistance. Molecules 8:21. https://doi.org/10.3390/molecules21070892
Loo TW, Bartlett MC, Clarke DM (2009) Identification of residues in the drug translocation pathway of the human multidrug resistance P-glycoprotein by arginine mutagenesis. J Biol Chem 284:24074–24087
Lucero ME, Unc A, Cooke P, Dowd S, Sun S (2011) Endophyte microbiome diversity in micropropagated Atriplex canescens and Atriplex torreyi var griffithsii. PLoS One 6:e17693. https://doi.org/10.1371/journal.pone.0017693
Luter HM, Widder S, Botté ES, Wahab MA, Whalan S, Moitinho Silva L, Thomas T, Webster NS (2015) Biogeographic variation in the microbiome of the ecologically important sponge, Carteriospongia foliascens. Peer J 3:e1435. https://doi.org/10.7717/peerj.1435
Lynn R, Bersabeh T, Lucile WE, Robert B, Nichole T, Alexander B, Barry R, LeDuc JW, Noah JW (2015) Adapting high-throughput screening methods and assays for biocontainment laboratories. Assay Drug Dev Technol 13:44–54
Ma C, Zhang J, Wang J (2016) Pharmacological characterization of the spectrum of antiviral activity and genetic barrier to drug resistance of M2-S31 N channel blockers. Mol Pharmacol 90:188–198. https://doi.org/10.1124/mol.116.105346
Macalino SJ, Gosu V, Hong S, Choi S (2015) Role of computer-aided drug design in modern drug discovery. Arch Pharm Res 38:1686–1701. https://doi.org/10.1007/s12272-015-0640-5
Macías-Rubalcava ML, Sánchez-Fernández RE (2017) Secondary metabolites of endophytic Xylaria species with potential applications in medicine and agriculture. World J Microbiol Biotechnol 33:15. https://doi.org/10.1007/s11274-016-2174-5
Manter DK, Delgado JA, Holm DG, Stong RA (2010) Pyrosequencing reveals a highly diverse and cultivar-specific bacterial endophyte community in potato roots. Microb Ecol 60:157–166
Maróti G, Kondorosi É (2014) Nitrogen-fixing Rhizobium-legume symbiosis: are polyploidy and host peptide-governed symbiont differentiation general principles of endosymbiosis. Front Microbiol 5:326. https://doi.org/10.3389/fmicb.2014.00326
Martínez-Pérez C, Ward C, Turnbull AK, Mullen P, Cook G, Meehan J, Jarman EJ, Thomson PIT, Campbell JC, McPhail DM, Harrison DJ, Langdon SP (2016) Antitumour activity of the novel flavonoid Oncamex in preclinical breast cancer models. Br J Cancer 114:905–916. https://doi.org/10.1038/bjc.2016.6
Mayura K, Amol B (2015) Role of computational chemistry in drug design: an overview. Asian J Biochem Pharm Res 5:2231–2560
Meanwell NA (2016) Improving drug design: an update on recent applications of efficiency metrics, strategies for replacing problematic elements, and compounds in nontraditional drug space. Chem Res Toxicol 29:564–616
Mendes R, Garbeva P, Raaijmakers JM (2013) The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms. FEMS Microbiol Rev 37:634–663
Meng X, Liang H, Luo L (2016) Antitumor polysaccharides from mushrooms: a review on the structural characteristics, antitumor mechanisms, and immunomodulating activities. Carbohydr Res 424:30–41. https://doi.org/10.1016/j.carres.2016.02.008
Meyling NV, Hajek AE (2010) Principles of community and metapopulation ecology: application to fungal entomopathogens. BioControl 55:39–54
Michael S, Auld D, Klumpp C, Jadhav A, Zheng W, Thorne N, Austin CP, Inglese J, Simeonov A (2008) A robotic platform for quantitative high-throughput screening. Assay Drug Dev Technol 6:637–657
Michalak K, Wesołowska O (2012) Polyphenols counteract tumor cell chemoresistance conferred by multidrug resistance proteins. Anticancer Agents Med Chem 12:880–890
Mignani S, Bryszewska M, Klajnert-Maculewicz B, Zablocka M, Majoral JP (2015) Advances in combination therapies based on nanoparticles for efficacious cancer treatment: an analytical report. Biomacromolecules 16:1–27. https://doi.org/10.1021/bm501285t
Miller KD, Siegel RL, Lin CC, Mariotto AB, Kramer JL, Rowland JH, Stein KD, Alteri R, Jemal A (2016) Cancer treatment and survivorship statistics, 2016. CA Cancer J Clin 66:271–289
Miron A, Aprotosoaie AC, Trifan A, Xiao J (2017) Flavonoids as modulators of metabolic enzymes and drug transporters. Ann NY Acad Sci 1398:152–167
Mishra J, Dromund J, Quazi SH, Satya Sridhar Karanki SS, Shaw JJ, Chen B, Kumar N (2013) Prospective of colon cancer treatments and scope for a combinatorial approach to enhanced cancer cell apoptosis. Crit Rev Oncol Hematol 86:232–250
Mishra P, Kumar A, Nagireddy A, Mani DN, Shukla AK, Tiwari R, Sundaresan V (2016) DNA barcoding: an efficient tool to overcome authentication challenges in the herbal market. Plant Biotechnol J 14:8–21
Mishra M, Mishra VK, Kashaw V, Iyer AK, Kashaw SK (2017) Comprehensive review of various strategies for antimalarial drug discovery. Eur J Med Chem 125:1300–1320
Miyamoto S, Komiya M, Fujii G, Hamoya T, Nakanishi R, Fujimoto K, Mutoh M (2017) Preventive effects of heat-killed Enterococcus faecalis strain EC-12 on mouse intestinal tumor development. Int J Mol Sci 18:826. https://doi.org/10.3390/ijms18040826
Modok S, Mellor HR, Callaghan R (2006) Modulation of multidrug resistance efflux pump activity to overcome chemoresistance in cancer. Curr Opin Pharmacol 6:350–354
Molina LG, da Fonseca GC, de Morais GL, de Oliveira LFV, de Carvalho JB, Kulcheski FR, Margis R (2012) Metatranscriptomic analysis of small RNAs present in soybean deep sequencing libraries. Genet Mol Biol 35:292–303
Monteiro MC, de la Cruz M, Cantizani J, Moreno C, Tormo JR, Mellado E, De Lucas JR, Asensio F, Valiante V, Brakhage AA, Latgé JP, Genilloud O, Vicente F (2012) A new approach to drug discovery: high-throughput screening of microbial natural extracts against Aspergillus fumigatus using resazurin. J Biomol Screen 17:542–549
Monteiro MS, Carvalho M, Bastos ML, Guedes de Pinho P (2013) Metabolomics analysis for biomarker discovery: advances and challenges. Curr Med Chem 20:257–271
Morales SE, Holben WE (2010) Linking bacterial identities and ecosystem processes: can “omic” analyses be more than the sum of their parts. FEMS Microbiol Ecol 75:2–16
Moudi M, Go R, Yien CYS, Nazre M (2013) Vinca alkaloids. Int J Prev Med 4:1231–1235
Munoz M, Henderson M, Haber M, Norris M (2007) Role of the MRP1/ABCC1 multidrug transporter protein in cancer. IUBMB Life 59:752–757
Nair DN, Padmavathy S (2014) Impact of endophytic microorganisms on plants, environment and humans. Sci World J 22:250693. https://doi.org/10.1155/2014/250693
Narayana KKC, Aswathanarayan JB, Vittal RR (2017) Endophytic peptides-a source of therapeutic agents. Curr Protein Pept Sci 18:284–290
Nasir B, Fatima H, Ahmed M, Haq IU (2015) Recent trends and methods in antimicrobial drug discovery from plant sources. Austin J Microbiol 1:1002
Navarro SL, Randolph TW, Shireman LM, Raftery D, McCune JS (2016) Pharmaco-metabonomic prediction of busulfan clearance in hematopoietic cell transplant recipients. J Proteome Res 15:2802–2811
Negreiros de Carvalho PL, Silva Ede O, Chagas-Paula DA, Hortolan Luiz JH, Ikegaki M (2016) Importance and implications of the production of phenolic secondary metabolites by endophytic fungi: a mini-review. Mini Rev Med Chem 16:259–271
Newman DJ, Cragg GM (2007) Natural products as sources of new drugs over the last 25 years. J Nat Prod 70:461–477
Newman DJ, Cragg GM (2012) Natural products as sources of new drugs over the 30 years from 1981 to 2010. J Nat Prod 75:311–335
Newman DJ, Cragg GM (2015) Endophytic and epiphytic microbes as “sources” of bioactive agents. Front Chem 3:34. https://doi.org/10.3389/fchem.2015.00034
Newman DJ, Cragg GM (2016) Natural products as sources of new drugs from 1981 to 2014. J Nat Prod 79:629−661
Nicoletti R, Fiorentino A (2015) Plant bioactive metabolites and drugs produced by endophytic fungi of spermatophyta. Agriculture 5:918–970
Nicoletti R, Trincone A (2016) Bioactive compounds produced by strains of Penicillium and Talaromyces of marine origin. Mar Drugs 14:2. https://doi.org/10.3390/md14020037
Nielsen KF, Mansson M, Rank C, Frisvad JC, Larsen TO (2011) Dereplication of microbial natural products by LC-DAD-TOFMS. J Nat Prod 74:2338–2348
Nisa H, Kamili AN, Nawchoo IA, Shafi S, Shameem N, Bandh SA (2015) Fungal endophytes as a prolific source of phytochemicals and other bioactive natural products: a review. Microb Pathog 82:50–59
Nishiumi S, Suzuki M, Kobayashi T, Matsubara A, Azuma T, Yoshida M (2014) Metabolomics for biomarker discovery in gastroenterological cancer. Metabolites 4:547–571
Nobili S, Lippi D, Witort E, Donnini M, Bausi L, Mini E, Capaccioli S (2009) Natural compounds for cancer treatment and prevention. Pharmacol Res 59:365–378
Nobili S, Landini I, Mazzei T, Mini E (2012) Overcoming tumor multidrug resistance using drugs able to evade P-glycoprotein or to exploit its expression. Med Res Rev 32:1220–1262
Nováková J, Farkašovský M (2013) Bioprospecting microbial metagenome for natural products. Biologia 68:1079–1086
O’Connor CJ, Beckmann HSG, Spring DR (2012) Diversity-oriented synthesis: producing chemical tools for dissecting biology. Chem Soc Rev 41:4444–4456
Ohgaki H, Kleihues P (2005) Epidemiology and etiology of gliomas. Acta Neuropathol 109:93–108
Okazaki S, Tittabutr P, Teulet A, Thouin J, Fardoux J, Chaintreuil C, Gully D, Arrighi JF, Furuta N, Miwa H, Yasuda M, Nouwen N, Teaumroong N, Giraud E (2016) Rhizobium-legume symbiosis in the absence of Nod factors: two possible scenarios with or without the T3SS. ISME J 10:64–74
Omuro AM, Delattre JY (2007) Editorial: what is new in the treatment of gliomas. Curr Opin Neurol 20:704–707
Ozawa M, Shimojima M, Goto H, Watanabe S, Hatta Y, Kiso M, Furuta Y, Horimoto T, Peters NR, Hoffmann FM, Kawaoka Y (2013) A cell-based screening system for influenza A viral RNA transcription/replication inhibitors. Sci Rep 3:1106. https://doi.org/10.1038/srep01106
Palmeira A, Sousa E, Vasconcelos MH, Pinto MM (2012) Three decades of P-gp inhibitors: skimming through several generations and scaffolds. Curr Med Chem 19:1946–2025
Pandya HJ, Park K, Chen W, Chekmareva MA, Foran DJ, Desai JP (2015) Simultaneous MEMS-based electro-mechanical phenotyping of breast cancer. Lab Chip 15:3695–3706
Panzarini E, Dini L (2014) Nanomaterial induced autophagy: a new reversal MDR tool in cancer therapy. Mol Pharm 11:2527–2538
Patel KN, Patel JK, Patel MP, Rajput GC, Patel HA (2010) Introduction to hyphenated techniques and their applications in pharmacy. Pharm Methods 1:2–13
Patel DA, Patel AC, Nolan WC, Zhang Y, Holtzman MJ (2012) High throughput screening for small molecule enhancers of the interferon signaling pathway to drive next-generation antiviral drug discovery. PLoS One 7:e36594. https://doi.org/10.1371/journal.pone.0036594
Patel DA, Patel AC, Nolan WC, Huang G, Romero AG, Charlton N, Agapov E, Zhang Y, Holtzman MJ (2014) High-throughput screening normalized to biological response: application to antiviral drug discovery. J Biomol Screen 19:119–130
Patil YB, Swaminathan SK, Sadhukha T, Ma L, Panyam J (2010) The use of nanoparticle-mediated targeted gene silencing and drug delivery to overcome tumor drug resistance. Biomaterials 31:358–365
Patridge E, Gareiss P, Kinch MS, Hoyer D (2016) An analysis of FDA-approved drugs: natural products and their derivatives. Drug Discov Today 21:204–207
Pawar SV, Ho JC, Yadav GD, Yadav VG (2017) The impending renaissance in discovery and development of natural products. Curr Top Med Chem 17:251–267
Paytubi S, de La Cruz M, Tormo JR, Martín J, González I, González-Menendez V, Balsalobre C (2017) A high-throughput screening platform of microbial natural products for the discovery of molecules with antibiofilm properties against Salmonella. Front Microbiol 8:326. https://doi.org/10.3389/fmicb.2017.00326
Pedrosa MO, da Cruz RMD, Viana JO, Moura RO, Ishiki HM, Filho JMB, Diniz MFFM, Scotti MT, Scotti L, Mendonca FJB (2017) Hybrid compounds as direct multitarget ligands: a review. Curr Top Med Chem 17:1044–1079
Pei C, Mi C, Sun L, Liu W, Li O, Hu X (2017) Diversity of endophytic bacteria of Dendrobium officinale based on culture dependent and culture independent methods. Biotechnol Biotechnol Equip 31:112–119. https://doi.org/10.1080/13102818.2016.1254067
Pereira RB, Andrade PB, Valentão P (2016) Chemical diversity and biological properties of secondary metabolites from sea hares of Aplysia genus. Mar Drugs 14:2. https://doi.org/10.3390/md14020039
Pérez-Herrero E, Fernández-Medarde A (2015) Advanced targeted therapies in cancer: drug nanocarriers, the future of chemotherapy. Eur J Pharm Biopharm 93:52–79
Pérez-Victoria I, Martín J, Reyes F (2016) Combined LC/UV/MS and NMR strategies for the Dereplication of marine natural products. Planta Med 82:857–871
Perkins C, Siddiqui S, Puri M, Demain AL (2016) Biotechnological applications of microbial bioconversions. Crit Rev Biotechnol 36:1050–1065
Perotto S, Angelini P, Bianciotto V, Bonfante P, Girlanda M, Kull T, Mello A, Pecoraro L, Perini C, Persiani MA, Saitta A, Sarrocco S, Vannacci G, Venanzoni R, Venturella G, Selosse MA (2013) Interactions of fungi with other organisms. Plant Biosyst 147:208–218
Petrini O (1991) Fungal endophytes of tree leaves. In: Andrews JH, Hirano SS (eds) Microbial ecology of leaves. Springer, New York, pp 179–197
Philippot L, Raaijmakers JM, Lemanceau P, van der Putten WH (2013) Going back to the roots: the microbial ecology of the rhizosphere. Nat Rev Microbiol 11:789–799
Piccart M (2003) The role of taxanes in the adjuvant treatment of early-stage breast cancer. Breast Cancer Res Treat 79:S25–S34
Pick A, Müller H, Mayer R, Haenisch B, Pajeva IK, Weigt M (2011) Structure activity relationships of flavonoids as inhibitors of breast cancer resistance protein (BCRP). Bioorg Med Chem 19:2090–2102
Pickens LB, Tang YI, Chooi YH (2011) Metabolic engineering for the production of natural products. Annu Rev Chem Biomol Eng 2:211–236
Pimentel MR, Molina G, Dionisio AP, Maróstica MR, Pastore GM (2011) Use of endophytes to obtain bioactive compounds and their application in biotransformation process. Biotechnol Res Int 2011:576286. https://doi.org/10.4061/2011/576286
Plodek A, Bracher F (2016) New perspectives in the chemistry of marine pyridoacridine alkaloids. Mar Drugs 14:2. https://doi.org/10.3390/md14020026
Porras-Alfaro A, Bayman P (2011) Hidden fungi, emergent properties: endophytes and microbiomes. Annu Rev Phytopathol 49:291–315
Prado-Prado F, Garcia-Mera X, Rodriguez-Borges JE, Concu R, Perez-Montoto LG, Gonzalez-Diaz H, Duardo-Sanchez A (2013) Patents of bio-active compounds based on computer-aided drug discovery techniques. Front Biosci 5:399–407
Prasad R, Kumar M, Varma A (2015) Role of PGPR in soil fertility and plant health. In: Egamberdieva D, Shrivastava S, Varma A (eds) Plant growth-promoting rhizobacteria (PGPR) and medicinal plants. Springer, New York, pp 247–260
Probst AJ, Weinmaier T, DeSantis TZ, Santo Domingo JW, Ashbolt N (2015) New perspectives on microbial community distortion after whole-genome amplification. PLoS One 10:e0124158. https://doi.org/10.1371/journal.pone.0124158
Qayyum RS, Bakhsh L, Husnain T (2012) Entomopathogenic fungi as biological controllers: new insights into their virulence and pathogenicity. Arch Biol Sci 64:21–42
Qi BL, Liu P, Wang QY, Cai WJ, Yuan BF, Feng YQ (2014) Derivatization for liquid chromatography mass spectrometry. TrAC Trends Anal Chem 59:121–132
Qin S, Chen HH, Zhao GZ, Li J, Zhu WY, Xu LH, Jiang JH, Li WJ (2012) Abundant and diverse endophytic actinobacteria associated with medicinal plant Maytenus austroyunnanensis in Xishuangbanna tropical rainforest revealed by culture-dependent and culture-independent methods. Environ Microbiol Rep 4:522–531
Qiu Q, Shi W, Li Z, Zhang B, Pan M, Cui J, Dai Y, Huang W, Qian H (2017) Exploration of 2-((Pyridin-4-ylmethyl)amino) nicotinamide derivatives as potent reversal agents against P-Glycoprotein-mediated multidrug resistance. J Med Chem 60:2930–2943
Quesada-Moraga E, López-Díaz C, Landa BB (2014) The hidden habit of the entomopathogenic fungus Beauveria bassiana: first demonstration of vertical plant transmission. PLoS One 9:e89278. https://doi.org/10.1371/journal.pone.0089278
Raj R, Mongia P, Kumar Sahu S, Ram A (2016) Nanocarriers based anticancer drugs: current scenario and future perceptions. Curr Drug Targets 17:206–228
Reed LK, Baer CF, Edison AS (2017) Considerations when choosing a genetic model organism for metabolomics studies. Curr Opin Chem Biol 36:7–14
Reinhold-Hurek B, Thomas Hurek T (2011) Living inside plants: bacterial endophytes. Curr Opin Plant Biol 14:435–443
Ren L, Perera C, Hemar Y (2012) Antitumor activity of mushroom polysaccharides: a. Food Funct 3:1118–1130
Richter C, Helaly SE, Thongbai B, Hyde KD, Stadler M (2016) Pyristriatins A and B: Pyridinocyathane antibiotics from the Basidiomycete Cyathus Cf. striatus. J Nat Prod 79:1684–1688
Rillig MC, Wendt S, Antonovics J, Hempel S, Kohler J, Wehner J, Caruso T (2013) Interactive effects of root endophytes and arbuscular mycorrhizal fungi on an experimental plant community. Oecologia 174:263–270
Riveiro ME, De Kimpe N, Moglioni A, Vázquez R, Monczor F, Shayo C, Davio C (2010) Coumarins: old compounds with novel promising therapeutic perspectives. Curr Med Chem 17:1325–1330
Roblesa O, Romoa D (2014) Chemo and site-selective derivatizations of natural products enabling biological studies. Nat Prod Rep 31:318–334
Rodriguez RJ, White JF Jr, Arnold AE, Redman RS (2009) Fungal endophytes: diversity and functional roles. New Phytol 182:314–330
Romagnolia R, Baraldia PG, Salvadora MK, Chayaha M, Camachoa ME, Prencipea F, Hamelb E, Consolaroc F, Bassoc G, Violac G (2014) Design, synthesis and biological evaluation of arylcinnamide hybrid derivatives as novel anticancer agents. Eur J Med Chem 81:394–407
Rosenblueth M, Martínez-Romero E (2006) Bacterial endophytes and their interactions with hosts. Mol Plant-Microbe Interact 19:827–837
Roy MA, McDonald PR, Sittampalam S, Chagutur R (2010) Open access high throughput drug discovery in the public domain: a Mount Everest. Curr Pharm Biotechnol 11:764–778
Rudgers JA, Clay K (2012) Microbial mutualists and biodiversity in ecosystems. In: Ohgushi T, Schmitz O, Holt RD (eds) Trait-mediated indirect interactions: ecological and evolutionary perspectives. Cambridge University Press, New York, pp 391–413
Rudgers J, Fischer S, Clay K (2010) Managing plant symbiosis: fungal endophyte genotype alters plant community composition. J Appl Ecol47:468–477
Ryan E, Reid GE (2016) Chemical derivatization and ultrahigh resolution and accurate mass spectrometrystrategies for “Shotgun” Lipidome analysis. Acc Chem Res 49:1596–1604
Sajesh BV, Guppy BJ, McManus KJ (2013) Synthetic genetic targeting of genome instability in cancer. Cancers 5:739–761
Sandercock AM, Rust S, Guillard S, Sachsenmeier KF, Holoweckyj N, Hay C, Flynn M, Huang Q, Yan K, Herpers B, Price LS, Soden J, Freeth J, Jermutus L, Hollingsworth R, Minter R (2015) Identification of anti-tumour biologics using primary tumour models, 3-D phenotypic screening and image-based multi-parametric profiling. Mol Cancer 14:147
Santoyo G, Moreno-Hagelsieb G, Orozco-Mosqueda Mdel C, Glick BR (2016) Plant growth-promoting bacterial endophytes. Microbiol Res 183:92–99
Sarasan M, Puthumana J, Job N, Han J, Lee JS, Philip R (2017) Marine algicolous endophytic fungi-A promising drug resource of the era. J Microbiol Biotechnol 27:1039–1052
Saultz JN, Garzon R (2016) Acute myeloid leukemia: a concise review. J Clin Med 5:E33. https://doi.org/10.3390/jcm5030033
Scheurer ME, Bondy ML, Aldape KD, Albrecht T, El-Zein R (2008) Detection of human CMV in different histological types of glioma. Acta Neuropathol 116:79–86
Sengupta S, Ganguli S, Singh PK (2017) Metagenome analysis of the root endophytic microbial community of Indian rice (O. sativa L.) Genom Data 12:41–43
Shanmugam MK, Lee JH, Chai EZ, Kanchi MM, Kar S, Arfuso F, Dharmarajan A, Kumar AP, Ramar PS, Looi CY, Mustafa MR, Tergaonkar V, Bishayee A, Ahn KS, Sethi G (2016) Cancer prevention and therapy through the modulation of transcription factors by bioactive natural compounds. Semin Cancer Biol 41:35–47
Sharma SB, Gupta R (2015) Drug development from natural resource: a systematic approach. Mini Rev Med Chem 15:52–57
Sheibani-Tezerji R, Rattei T, Sessitsch A, Trognitz F, Mitter B (2015) Transcriptome profiling of the endophyte Burkholderia phytol firmans PsJN indicates sensing of the plant environment and drought stress. mBio 6:e00621–e00615. https://doi.org/10.1128/mBio.0062115
Shen SY, Fulthorpe R (2015) Seasonal variation of bacterial endophytes in urban trees. Front Microbiol 6:427. https://doi.org/10.3389/fmicb.2015.00427
Shendure J, Ji H (2008) Next-generation DNA sequencing. Nat Biotechnol 26:1135–1145
Siegel RL, Miller KD, Jemal A (2017) Cancer statistics, 2017. CA Cancer J Clin 67:7–30
Simon C, Daniel R (2017) Construction of small-insert and large-insert metagenomic libraries. In: Streit WR, Daniel R (eds) Metagenomics: methods and protocols. Humana Press, New York, pp 1–12
Singh A, Yadav M, Singh P, Srivastava R, Singh N, Verma R, Singh RK (2014) N-heterocyclic analogs as peptide deformylase inhibitors: molecular modeling, synthesis, and antibacterial evaluation. BMC Infect Dis 14:E18. https://doi.org/10.1186/1471-2334-14-S3-E18
Solyanik GI (2010) Multifactorial nature of tumor drug resistance. Exp Oncol 32:181–185
Specian V, Sarragiotto MH, Pamphile JA, Clemente E (2012) Chemical characterization of bioactive compounds from the endophytic fungus Diaporthe helianthus isolated from Luehea divaricata. Braz J Microbiol 43:1174–1182
Staniek A, Woerdenbag HJ, Kayser O (2008) Endophytes: exploiting biodiversity for the improvement of natural product-based drug discovery. J Plant Interact 3:75–93
Stege A, Krühn A, Lage H (2010) Overcoming multidrug resistance by RNA interference. Methods Mol Biol 596:447–465
Stepniewska Z, Kuzniar A (2013) Endophytic microorganisms-promising applications in bioremediation of greenhouse gases. Appl Microbiol Biotechnol 97:9589–9596
Sternson LA, Stobaugh JF, Reid TJ, de Montigny P (1988) Chemical derivatization as a strategy to enhance detectability of agents used in cancer management. J Pharm Biomed Anal 6:657–668
Stierle AA, Stierle DB (2015) Bioactive secondary metabolites produced by the fungal endophytes of conifers. Nat Prod Commun 10:1671–1682
Stierle A, Strobel GA, Stierle D (1993) Taxol and taxane production by Taxomyces andreanae, an endophytic fungus of Pacific yew. Science 260:214–216
Stolnicu S, Moldovan C, Podoleanu C, Georgescu R (2015) Mesenchymal tumors and tumor-like lesions of the breast: a contemporary approach review. Ann Pathol 35:15–31
Strobel GA, Daisy B, Castillo U, Harper J (2004) Natural products from endophytic microorganisms. J Nat Prod 67:257–268
Sun X, Guo LD (2012) Endophytic fungal diversity: a review of traditional and molecular techniques. Mycology 3:65–76
Sun Q, Zhou Z, Qiu N, Shen Y (2017) Rational design of cancer nanomedicine: nano properly integration and synchronization. Adv Mater 29:201606628. https://doi.org/10.1002/adma.201606628
Suryanarayanan TS (2013) Endophyte research: going beyond isolation and metabolite documentation. Fungal Ecol 6:561–568
Suryanarayanan TS, Thirunavukkarasu N, Govindarajulu MB, Sasse F, Jansen R, Mural TS (2009) Fungal endophytes and bioprospecting. Fungal Biol Rev 23:9–19
Swamy MK, Akthar MS, Sinniah UR (2016a) Root exudates and their molecular interactions with rhizospheric microbes. In: Hakeem KR, Akhtar MS (eds) Plant, soil and microbes: volume 2: mechanisms and molecular interactions. Springer, Cham, pp 59–77
Swamy MK, Akthar MS, Sinniah UR (2016b) Response of PGPR and AM fungi toward growth and secondary metabolite production in medicinal and aromatic plants. In: Hakeem KR, Akhtar MS (eds) Plant, soil and microbes: volume 2: mechanisms and molecular interactions. Springer, Cham, pp 145–168
Szakacs G, Paterson JK, Ludwig JA, Booth-Genthe C, Gottesman MM (2006) Targeting multidrug resistance in cancer. Nat Rev Drug Discov 5:219–234
Szakács G, Hall MD, Gottesman MM, Boumendjel A, Kachadourian R, Day BJ, Baubichon-Cortay H, Di Pietro A (2014) Targeting the achilles heel of multidrug-resistant cancer by exploiting the fitness cost of resistance. Chem Rev 114:5753–5774
Tan PH, Ellis IO (2013) Myoepithelial and epithelial-myoepithelial, mesenchymal and fibroepithelial breast lesions: updates from the WHO classification of tumours of the breast 2012. J Clin Pathol 66:465–470
Tan W, Mei H, Chao L, Liu T, Pan X, Shu M, Yang L (2013) Combined QSAR and molecule docking studies on predicting P-glycoprotein inhibitors. J Comput Aided Mol Des 27:1067–1073
Tan BY, Acs G, Apple SK, Badve S, Bleiweiss IJ, Brogi E, Calvo JP, Dabbs DJ, Ellis IO, Eusebi V, Farshid G, Fox SB, Ichihara S, Lakhani SR, Rakha EA, Reis-Filho JS, Richardson AL, Sahin A, Schmitt FC, Schnitt SJ, Siziopikou KP, Soares FA, Tse GM, Vincent-Salomon A, Tan PH (2016) Phyllodes tumours of the breast: a consensus review. Histopathology 68:5–21
Tari LW (2012) The utility of structural biology in drug discovery. In: Tari LW (ed) Structure-based drug discovery, methods in molecular biology, vol 841. Springer, New York, pp 1–28
Tashiro E, Imoto M (2012) Target identification of bioactive compounds. Bioorg Med Chem 20:1910–1921
Telerman A, Ofir R, Kashman Y, Elmann A (2017) 3,5,4′-trihydroxy-6,7,3′-trimethoxyflavone protects against β-amyloid-induced neurotoxicity through antioxidative activity and interference with cell signaling. BMC Complement Altern Med 17:332. https://doi.org/10.1186/s12906-017-1840-y
Teng YN, Sheu MJ, Hsieh YW, Wang RY, Chiang YC, Hung CC (2016) β-carotene reverses multidrug resistant cancer cells by selectively modulating human P-glycoprotein function. Phytomedicine 23:316–323. https://doi.org/10.1016/j.phymed.2016.01.008
Thomas H, Coley HM (2003) Overcoming multidrug resistance in cancer: an update on the clinical strategy of inhibiting p-glycoprotein. Cancer Control 10:159–165
Tian CF, Zhou YJ, Zhang YM, Li QQ, Zhang YZ, Li DF, Wang S, Wang J, Gilbert LB, Li YR, Chen WX (2012) Comparative genomics of rhizobia nodulating soybean suggests extensive recruitment of lineage specific genes in adaptations. Proc Natl Acad Sci USA 109:8629–8634
Tiwari AK, Sodani K, Dai CL, Ashby CR Jr, Chen ZS (2011) Revisiting the ABCs of multidrug resistance in cancer chemotherapy. Curr Pharm Biotechnol 12:570–594
Torre LA, Bray F, Siegel RL, Ferlay J, Lortet-Tieulent J, Jemal A (2015) Global cancer statistics, 2012. CA Cancer J Clin 65:87–108
Toyooka T (2017) Derivatization-based high-throughput bioanalysis by LC-MS. Anal Sci 33:555–564
Tsurumaru H, Okubo T, Okazaki K, Hashimoto M, Kakizaki K, Hanzawa E, Takahashi H, Asanome N, Tanaka F, Sekiyama Y, Ikeda S, Minamisawa K (2015) Metagenomic analysis of the bacterial community associated with the taproot of sugar beet. Microbes Environ 30:63–69
Tu Q, Yu H, He Z, Deng Y, Wu L, Van Nostrand JD, Zhou A, Voordeckers J, Lee YJ, Qin Y, Hemme CL, Shi Z, Xue K, Yuan T, Wang A, Zhou J (2014) GeoChip 4: a functional gene-array-based high-throughput environmental technology for microbial community analysis. Mol Ecol Resour 14:914–928
Turner TR, Ramakrishnan K, Walshaw J, Heavens D, Alston M, Swarbreck D, Osbourn A, Grant A, Poole PS (2013) Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants. ISME J 7:2248–2258
Ullah MF (2008) Cancer multidrug resistance (MDR): a major impediment to effective chemotherapy. Asian Pac J Cancer Prev 9:1–6
Ullah S, Saeed M, Halimi SMA, Muhammad Imran Fakhri MI, Khan KM, Khan I, Perveen S (2016) Med Chem Res 25:1468–1475
Umashankar T, Govindappa M, Yarappa Lakshmikantha R, Padmalatha Rai S, Channabasava (2015) Isolation and characterization of coumarin isolated from endophyte, Alternaria species-1of Crotalaria pallida and its apoptotic action on hela cancer cell line. Metabolomics 5:158. https://doi.org/10.4172/2153-0769.1000158
van Hattum H, Waldmann H (2014) Biology-oriented synthesis: harnessing the power of evolution. J Am Chem Soc 136:11853–11859
Vasundhara M, Kumar A, Reddy MS (2016) Molecular approaches to screen bioactive compounds from endophytic fungi. Front Microbiol 7:1774. https://doi.org/10.3389/fmicb.2016.01774
Vega FE, Goettel MS, Blackwell M, Chandler D, Jackson MA, Keller S, Koike M, Maniania NK, Monzon A, Ownley BH, Pell JK, Rangel DEN, Roy HE (2009) Fungal entomopathogens: new insights on their ecology. Fungal Ecol 2:1–11
Vempati UD, Przydzial MJ, Chung C, Abeyruwan S, Mir A, Sakurai K, Visser U, Lemmon VP, Schüre SC (2012) Formalization, annotation and analysis of diverse drug and probe screening assay datasets using the BioAssay Ontology (BAO). PLoS One 7:e49198. https://doi.org/10.1371/journal.pone.0049198
Venugopalan A, Srivastava S (2015) Endophytes as in vitro production platforms of high-value plant secondary metabolites. Biotechnol Adv 33:873–887
Visser U, Abeyruwan S, Vempati U, Smith RP, Lemmon V, Schürer SC (2011) Bioassay Ontology(BAO): a semantic description of bioassays and high-throughput screening results. BMC Bioinform 12:257. https://doi.org/10.1186/1471-2105-12-257
Wang LW, Zhang YL, Lin FC, Hu YZ, Zhang CL (2011) Natural products with antitumor activity from endophytic fungi. Mini Rev Med Chem 11:1056–1074
Wang D, Yang S, Tang F, Zhu H (2012) Symbiosis specificity in the legume: rhizobial mutualism. Cell Microbiol 14:334–342
Wang L, Ma C, Wipf P, Liu H, Su W, Xie XQ (2013) Target hunter: an in silico target identification tool for predicting therapeutic potential of small organic molecules based on the chemogenomic database. AAPS J 15:395–406
Wang X, Zhang X, Liu L, Xiang M, Wang W, Sun X, Che Y, Guo L, Liu G, Guo L, Wang C, Yin WB, Stadler M, Zhang X, Liu X (2015) Genomic and transcriptomic analysis of the endophytic fungus Pestalotiopsis fici reveals its lifestyle and high potential for synthesis of natural products. BMC Genomics 16:28. https://doi.org/10.1186/s12864-014-1190-9
Wang L, Qiu P, Long X-F, Zhang S, Zeng ZG, Tian YQ (2016) Comparative analysis of chemical constituents, antimicrobial and antioxidant activities of ethylacetate extracts of Polygonum cuspidatum and its endophytic actinomycete, Streptomyces sp. A0916. Chin J Nat Med 14:117–123
Wawer MJ, Li K, Gustafsdottir SM, Ljosa V, Bodycombe NE, Marton MA, Sokolnicki KL, Bray MA, Kemp MM, Winchester E, Taylor B, Grant GB, Hon CS, Duvall JR, Wilson JA, Bittker JA, Dančík V, Narayan R, Subramanian A, Winckler W, Golub TR, Carpenter AE, Shamji AF, Schreiber SL, Clemons PA (2014) Toward performance-diverse small-molecule libraries for cell-based phenotypic screening using multiplexed high-dimensional profiling. Proc Natl Acad Sci USA 111:10911–10916
Webster NS, Thomas T (2016) The sponge hologenome. MBio 7:e00135–e00116. https://doi.org/10.1128/mBio.00135-16
Weinstock GM (2012) Genomic approaches to studying the human microbiota. Nature 489:250–256. https://doi.org/10.1038/nature11553
Weishampel PA, Bedford BL (2006) Wetland dicots and monocots differ in colonization by arbuscular mycorrhizal fungi and dark septate endophytes. Mycorrhiza 16:495–502
Wen PY, Macdonald DR, Reardon DA, Cloughesy TF, Sorensen AG, Galanis E, Degroot J, Wick W, Gilbert MR, Lassman AB, Tsien C, Mikkelsen T, Wong ET, Chamberlain MC, Stupp R, Lamborn KR, Vogelbaum MA, van den Bent MJ, Chang SM (2010) Updated response assessment criteria for high-grade gliomas: response assessment in neuro-oncology working group. J Clin Oncol 28:1963–1972
Wetzel S, Bon RS, Kumar K, Waldmann H (2011) Biology-oriented synthesis. Angew Chem Int Ed Engl 50:10800–10826
Wilson D (1995) Endophyte: the evolution of a term, and clarification of its use and definition. Oikos 73:274–276
Wiseman H, Kaur H, Halliwell B (1995) DNA damage and cancer: measurement and mechanism. Cancer Lett 93:113–120
Wishart DS, Mandal R, Stanislaus A, Ramirez-Gaona M (2016) Cancer metabolomics and the human metabolome database. Metabolites 2:6. https://doi.org/10.3390/metabo6010010
Wisniewski-Dyé F, Vial L (2015) Cell-cell communication in Azospirillum and related PGPR. In: Dario CF, Creus YO, Cecilia M (eds) Handbook for Azospirillum, technical issues and protocols. Springer, New York, pp 263–285
Wong IL, Chan KF, Tsang KH, Lam CY, Zhao Y, Chan TH, Chow LM (2009) Modulation of multidrug resistance Protein 1 (MRP1/ABCC1)-mediated multidrug resistance by bivalent Apigenin homodimers and their derivatives. J Med Chem 52:5311–5322
Wright KM, Chapman S, McGeachy K, Humphris S, Campbell E, Toth IK, Holden NJ (2013) The endophytic lifestyle of Escherichia coli O157: H7: quantification and internal localization in roots. Phytopathology 103:333–340
Wu CP, Ohnuma S, Ambudkar SV (2011) Discovering natural product modulators to overcome multidrug resistance in cancer chemotherapy. Curr Pharm Biotechnol 12:609–620
Wu C, Gong MQ, Liu BY, Zhuo RX, Cheng SX (2017) Co-delivery of multiple drug resistance inhibitors by polymer/inorganic hybrid nanoparticles to effectively reverse cancer drug resistance. Colloids Surf B Biointerfaces 149:250–259
Xu GB, He G, Bai HH, Yang T, Zhang GL, Wu LW, Li GY (2015) Indole alkaloids from Chaetomium globosum. J Nat Prod 78:1479–1485
Xue X, Liang XJ (2012) Overcoming drug efflux-based multidrug resistance in cancer with nanotechnology. Chin J Cancer 31:100–109
Yamakawa Y, Kusuhara M, Terashima M, Kinugasa Y, Sugino T, Abe M, Mochizuki T, Hatakeyama K, Kami K, Yamaguchi K (2017) CD44 variant 9 expression as a predictor of gastric cancer recurrence: Immunohistochemical and metabolomic analysis of surgically resected tissues. Biomed Res 38:41–52
Yan JK, Pei JJ, Ma HL, Wang ZB, Liu YS (2017) Advances in antitumor polysaccharides from phellinus sensu lato: production, isolation, structure, antitumor activity, and mechanisms. Crit Rev Food Sci Nutr 57:1256–1269
Yarla NS, Bishayee A, Sethi G, Reddanna P, Kalle AM, Dhananjaya BL, Dowluru KS, Chintala R, Duddukuri GR (2016) Targeting arachidonic acid pathway by natural products for cancer prevention and therapy. Semin Cancer Biol 40–41:48–81
Yoo C, Park YS (2015) Companion diagnostics for the targeted therapy of gastric cancer. World J Gastroenterol 21:10948–10955
Yu H, Zhang L, Li L, Zheng C, Guo L, Li W, Sun P, Qin L (2010) Recent developments and future prospects of antimicrobial metabolites produced by endophytes. Microbiol Res 165:437–449
Yule KM, Miller TEX, Rudgers JA (2013) Costs, benefits, and loss of vertically transmitted symbionts affect host population dynamics. Oikos 122:1401–1410
Zamioudis C, Pieterse CMJ (2012) Modulation of host immunity by beneficial microbes. Mol Plant-Microbe Interact 25:139–150
Zander Balderud L, Murray D, Larsson N, Vempati U, Schürer SC, Bjäreland M, Engkvist O (2015) Using the BioAssay Ontology for analyzing high-throughput screening data. J Biomol Screen 20:402–415
Zennaro L, Vanzani P, Nicolè L, Cappellesso R, Fassina A (2017) Metabonomics by proton nuclear magnetic resonance in human pleural effusions: a route to discriminate between benign and malignant pleural effusions and to target small molecules as potential cancer biomarkers. Cancer 125:341–348. https://doi.org/10.1002/cncy.21832
Zhang HW, Song YC, Tan RX (2006) Biology and chemistry of endophytes. Nat Prod Rep 23:753–771
Zhang D, Ge H, Xie D, Chen R, Zou J-H, Tao X, Dai J (2013) Periconiasins A-C, new cytotoxic cytochalasans with an unprecedented 9/6/5 tricyclic ring system from endophytic fungus Periconia sp. Org Lett 15:1674–1677
Zhang HW, Ying C, Bai XL (2014a) Advancement in endophytic microbes from medicinal plants. Int J Pharm Sci Res 5:1589–1600
Zhang XY, Tang GL, Xu XY, Nong XH, Qi SH (2014b) Insights into deep-sea sediment fungal communities from the east Indian ocean using targeted environmental sequencing combined with traditional cultivation. PLoS One 9:e109118
Zhang Y, Ling J, Yang Q, Wen C, Yan Q, Sun H, Van Nostrand JD, Shi Z, Zhou J, Dong J (2015) The functional gene composition and metabolic potential of coral-associated microbial communities. Sci Rep 5:16191. https://doi.org/10.1038/srep16191
Zhang CG, Zhu WJ, Liu Y, Yuan ZQ, Yang SD, Chen WL, Li JZ, Zhou XF, Liu C, Zhang XN (2016) Novel polymer micelle mediated co-delivery of doxorubicin and P-glycoprotein siRNA for reversal of multidrug resistance and synergistic tumor therapy. Sci Rep 6:23859. https://doi.org/10.1038/srep23859
Zhang MM, Qiao Y, Ang EL, Zhao H (2017) Using natural products for drug discovery: the impact of the genomics era. Expert Opin Drug Discovery 12:475–487
Zhao Y, He M, Ding J, Xi Q, Loake GJ, Zheng W (2016) Regulation of anticancer styrylpyrone biosynthesis in the medicinal mushroom Inonotus obliquus requires thioredoxin-mediated transnitrosylation of s-nitrosoglutathione reductase. Sci Rep 6:37601. https://doi.org/10.1038/srep37601
Zhou B, Xiao JF, Tuli L, Ressom HW (2012) LC-MS based metabolomics. Mol Biosyst 8:470–481
Zhou Z, Han Z, Zeng Y, Zhang M, Cui Y, Xu L, Zhang L (2014) Chinese FDA approved fungal glycan-based drugs: an overview of structures, mechanisms and clinical related studies. Transl Med 4:141. https://doi.org/10.4172/2161-1025.1000141
Zhou J, He Z, Yang Y, Deng Y, Tringe SG, Alvarez-Cohen L (2015) High- throughput metagenomic technologies for complex microbial community analysis: open and closed formats. MBio 6:e02288–e02214
Zhou R, Han YJ, Zhang MH, Zhang KR, Ng TB, Liu F (2017) Purification and characterization of a novel ubiquitin-like antitumor protein with hemagglutinating and deoxyribonuclease activities from the edible mushroom Ramaria botrytis. AMB Exp 7:47. https://doi.org/10.1186/s13568-017-0346-9
Zinzi L, Capparelli E, Cantore M, Contino M, Leopoldo M, Colabufo NA (2014) Small and innovative molecules as a new strategy to revert MDR. Front Oncol 4:2. https://doi.org/10.3389/fonc.2014.00002
Zoete V, Daina A, Bovigny C, Michielin OJ (2016) Swisssimilarity: a web tool for low to ultra high throughput ligand-based virtual screening. Chem Inf Model 56:1399–1404
Acknowledgments
We thank the editors and the all anonymous reviewers for their constructive comments, which helped us to improve this chapter.
Conflict of Interest
The author certifies that there is no conflict of interest with any financial organization regarding the material discussed in this chapter.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2018 Springer Nature Singapore Pte Ltd.
About this chapter
Cite this chapter
Filho, J.A.C. (2018). Endophytic Microbes as a Novel Source for Producing Anticancer Compounds as Multidrug Resistance Modulators. In: Akhtar, M., Swamy, M. (eds) Anticancer Plants: Natural Products and Biotechnological Implements. Springer, Singapore. https://doi.org/10.1007/978-981-10-8064-7_15
Download citation
DOI: https://doi.org/10.1007/978-981-10-8064-7_15
Published:
Publisher Name: Springer, Singapore
Print ISBN: 978-981-10-8063-0
Online ISBN: 978-981-10-8064-7
eBook Packages: Biomedical and Life SciencesBiomedical and Life Sciences (R0)