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Host and Guest: Vanilla Inhabited by Endophytes

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Part of the book series: Reference Series in Phytochemistry ((RSP))

Abstract

Fungal endophytes are known to produce secondary metabolites. The synthesis of vanillin and its precursors have never been clearly elucidated. Given fungi can produce such metabolites, it is speculated that fungal endophytes in vanilla could be contributing to vanillin and its precursors. An investigation was thus carried to find whether fungal endophytes are present in Vanilla planifolia. Additionally, vanilla flavor varies across cultivation regions; hence, the distribution of endophytes across regions was also assessed and found to differ. The metabolic changes brought by the fungi on vanillin and its precursors in vanilla pods were also evaluated. Out of 434 isolated fungal endophytes, two candidates emerged: Pestalotiopsis microspora and Diaporthe phaseolorum. However, P. microspora increased the most the absolute amounts (quantified by 1H NMR in μmol/g DW green pods) of vanillin (37.0 × 10−3), vanillyl alcohol (100.0 × 10−3), vanillic acid (9.2 × 10−3), and p-hydroxybenzoic acid (87.9 × 10−3) when cultured on green pod-based media. Given the physical proximity of fungi inside pods, endophytic biotransformation may contribute to the complexity of vanilla flavors.

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Abbreviations

DNA:

Deoxyribonucleic acid

GC-O:

Gas chromatography-olfactometry

H NMR:

Proton nuclear magnetic resonance

HPLC:

High-performance liquid chromatography

HPLC-DAD:

High-performance liquid chromatography-diode array detector

ITS:

Internal transcribed spacer

MOTU:

Molecular operational taxonomic unit

NMR:

Nuclear magnetic resonance

PCA:

Principal component analysis

PDA:

Potato dextrose agar

p-HB acid:

p-Hydroxybenzoic acid

p-HBAld:

p-Hydroxybenzaldehyde

rDNA:

Ribosomal deoxyribonucleic acid

References

  1. Ramachandra SR, Ravishankar GA (2000) Vanilla flavour: production by conventional and biotechnological routes. J Sci Food Agric 80:289–304

    Article  Google Scholar 

  2. Toth S, Lee KJ, Havkin-Frenkel D, Belanger FC, Hartman TG (2011) Volatile compounds in Vanilla. In: Havkin-Frenkel D, Belanger F (eds) Handbook of vanilla science and technology. Blackwell Publishing, West Sussex

    Google Scholar 

  3. Havkin-Frenkel D, French JC, Graft NM, Joel DM, Pak FE, Frenkel C (2004) Interrelation of curing and botany in vanilla (Vanilla planifolia) bean. Acta Hortic (ISHS) 629:93–102

    Article  CAS  Google Scholar 

  4. Dunphy P, Bala K (2012) The role of microorganisms in vanilla curing. Part 1: evidence for microbial involvement. Perfumer Flavorist 37:24–29

    CAS  Google Scholar 

  5. Leffingwell JC, Leffingwell D (2015) Flavours and fragrances: recent advances in biotechnology. Speciality Chemicals Magazine May:32–34

    Google Scholar 

  6. Perfumer and flavorist (2014) Givaudan submits patent application for vanilla fermentation process. Perfumer Flavorist. 6 Jan 2014

    Google Scholar 

  7. Sharp MD, Kocaoglu-Vurma NA, Langford V, Rodriguez-Saona LE, Harper WJ (2012) Rapid discrimination and characterization of vanilla bean extracts by attenuated total reflection infrared spectroscopy and selected ion flow tube mass spectrometry. J Food Sci 77:284–292

    Article  Google Scholar 

  8. Ranadive AS (2011) Quality control of vanilla beans and extracts. In: Havkin-Frenkel D, Belanger F (eds) Handbook of vanilla science and technology. Blackwell Publishing, West Sussex

    Google Scholar 

  9. Porras-Alfaro A, Bayman P (2007) Mycorrhizal fungi of vanilla: diversity, specificity and effects on seed germination and plant growth. Mycologia 99:510–525

    Article  CAS  Google Scholar 

  10. Pinaria AG, Liew ECY, Burgess LW (2010) Fusarium species associated with vanilla stem rot in Indonesia. Australas Plant Pathol 39:176–183

    Article  Google Scholar 

  11. Röling WF, Kerler J, Braster M, Apriyantono A, Stam H, van Verseveld HW (2001) Microorganisms with a taste for vanilla: microbial ecology of traditional Indonesian vanilla curing. Appl Environ Microbiol 67:1995–2003

    Article  Google Scholar 

  12. Khoyratty S, Dupont J, Lacoste S, Palama TL, Choi YH, Kim HK, Payet B, Grisoni M, Fouillaud M, Verpoorte R, Kodja H (2015) Fungal endophytes of Vanilla planifolia across Réunion Island: isolation, distribution and biotransformation. BMC Plant Biol 15:1–19

    Article  Google Scholar 

  13. Tan XM, Chen XM, Wang CL, Jin XH, Cui JL, Chen J (2012) Isolation and identification of endophytic fungi in roots of nine Holcoglossum plants (Orchidaceae) collected from Yunnan, Guangxi, and Hainan provinces of China. Curr Microbiol 64:140–147

    Article  CAS  Google Scholar 

  14. Rodriguez RJ, White JF Jr, Arnold AE, Redman RS (2009) Fungal endophytes: diversity and functional roles. New Phytol 182:314–330

    Article  CAS  Google Scholar 

  15. Mejı’a CL, Rojas EI, Maynard Z, Bael SV, Arnold AE, Hebbar P (2008) Endophytic fungi as biocontrol agents of Theobroma cacao pathogens. Biol Control 46:4–14

    Article  Google Scholar 

  16. Tadych M, Bergen MS, Johnson-Cicalese J, Polashock JJ, Vorsa N, White JF Jr (2012) Endophytic and pathogenic fungi of developing cranberry ovaries from flower to mature fruit: diversity and succession. Fungal Divers 54:101–116

    Article  Google Scholar 

  17. Palama TL, Khatib A, Choi YH, Payet B, Fock I, Verpoorte R (2009) Metabolic changes in different developmental stages of Vanilla planifolia pods. J Agric Food Chem 57:7651–7658

    Article  CAS  Google Scholar 

  18. Vitorino LC, Silva FG, Lima WC, Soares MA, Pedroso RCN, Silva MR (2013) Metabolic response induced by endophytic fungi and bacteria in H. marrubioides Epling in vitro microplants. Quim Nova 36:1014–1020

    Article  CAS  Google Scholar 

  19. Dixon RA (2011) Vanillin biosynthesis – not as simple as it seems? In: Havkin-Frenkel D, Belanger F (eds) Handbook of vanilla science and technology. Blackwell Publishing, West Sussex

    Google Scholar 

  20. Sachan A, Ghosh S, Mitra A (2005) Biotransformation of p-coumaric acid by Paecilomyces variotii. Lett Appl Microbiol 42:35–41

    Article  Google Scholar 

  21. Henderson MEK, Farmer VC (1955) Utilization by soil fungi of p-hydroxybenzaldehyde, ferulic acid, syringaldehyde and vanillin. J Gen Microbiol 12:37–46

    Article  CAS  Google Scholar 

  22. Rahouti M, Seigle-Murandi F, Steiman R, Eriksson KE (1989) Metabolism of ferulic acid by Paecilomyces variotii and Pestalotia palmarum. Appl Environ Microbiol 55:2391–2398

    CAS  Google Scholar 

  23. Dunphy P, Bala K (2012) The role of microorganisms in vanilla curing. Part 2: microbial transformation of phenols and other compounds. Perfumer Flavorist 37(September):22–27

    CAS  Google Scholar 

  24. Ramos HP, Said S (2011) Modulation of biological activities produced by an endophytic fungus under different culture conditions. Adv Biosci Biotechnol 2:443–449

    Article  Google Scholar 

  25. Hernandez-Hernandez J (2011) Vanilla Diseases. In: Havkin-Frenkel D, Belanger F (eds) Handbook of vanilla science and technology. Blackwell Publishing, West Sussex

    Google Scholar 

  26. Shanmugavalli N, Umashankar V, Raheem S (2009) Antimicrobial activity of Vanilla planifolia. Indian J Sci Technol 2:37–40

    CAS  Google Scholar 

  27. Hanson CA, Allison SD, Bradford MA, Wallenstein MD, Treseder KK (2008) Fungal taxa target different carbon sources in forest soil. Ecosystems 11:1157–1167

    Article  CAS  Google Scholar 

  28. Le Comité d’experts FAO/OMS sur les additifs alimentaires (2001) Compendium of food additive specifications, A 496 ddendum 9. In: Joint FAO/WHO Expert Committee on Food Additives 57th session: 2001 June 5–14. Food and Agriculture Organization of the United Nations FAO, Rome

    Google Scholar 

  29. Hoffman PG, Zapf CM (2011) Flavor, quality, and authentication. In: Havkin-Frenkel D, Belanger F (eds) Handbook of vanilla science and technology. Blackwell Publishing, West Sussex

    Google Scholar 

  30. Crozier J, Thomas SE, Aime MC, Evans HC, Holmes KA (2006) Molecular characterization of fungal endophytic morphospecies isolated from stems and pods of Theobroma cacao. Plant Pathol 55:783–791

    Article  CAS  Google Scholar 

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Correspondence to Shahnoo Khoyratty .

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Khoyratty, S., Choi, Y.H., Dupont, J., Verpoorte, R., Kodja, H. (2017). Host and Guest: Vanilla Inhabited by Endophytes. In: Mérillon, JM., Ramawat, K. (eds) Fungal Metabolites. Reference Series in Phytochemistry. Springer, Cham. https://doi.org/10.1007/978-3-319-25001-4_36

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