Abstract
Lipids play an important role in maintaining P-type ATPase structure and function, and often they are crucial for ATPase activity. When the P-type ATPases are in the membrane, they are surrounded by a mix of different lipid species with varying aliphatic chain lengths and saturation, and the complex interplay between the lipids and the P-type ATPases are still not well understood. We here describe a robust method to exchange the majority of the lipids surrounding the ATPase after solubilisation and/or purification with a target lipid of interest. The method is based on an ultracentrifugation step, where the protein sample is spun through a dense buffer containing large excess of the target lipid, which results in an approximately 80–85 % lipid exchange. The method is a very gently technique that maintains protein folding during the process, hence allowing further characterization of the protein in the presence of a target lipid of interest.
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References
Starling AP, East JM, Lee AG (1993) Effects of phosphatidylcholine fatty acyl chain length on calcium binding and other functions of the (Ca(2+)-Mg2+)-ATPase. Biochemistry 32:1593–1600
Cornea RL, Thomas DD (1994) Effects of membrane thickness on the molecular dynamics and enzymatic activity of reconstituted Ca-ATPase. Biochemistry 33:2912–2920
Gustavsson M, Traaseth NJ, Karim CB et al (2011) Lipid-mediated folding/unfolding of phospholamban as a regulatory mechanism for the sarcoplasmic reticulum Ca2+-ATPase. J Mol Biol 408:755–765
Sonntag Y, Musgaard M, Olesen C et al (2011) Mutual adaptation of a membrane protein and its lipid bilayer during conformational changes. Nat Commun 2:304
Johannsson A, Smith GA, Metcalfe JC (1981) The effect of bilayer thikness on the activity of (Na+ + K+)-ATPase. Biochim Biophys Acta 641:416–421
Lee AG (2003) Lipid–protein interactions in biological membranes: a structural perspective. Biochim Biophys Acta—Biomembr 1612:1–40
Marsh D, Horváth LI (1998) Structure, dynamics and composition of the lipid-protein interface. Perspectives from spin-labelling. Biochim Biophys Acta 1376:267–296
Drachmann ND, Olesen C, Møller JV et al (2014) Comparing crystal structures of Ca(2+)-ATPase in the presence of different lipids. FEBS J. doi:10.1111/febs.12957
Warren GB, Toon P, Birdsall NJ et al (1974) Reconstitution of a calcium pump using defined membrane components. Proc Natl Acad Sci U S A 71:622–626
Warren GB, Toon PA, Birdsall NJM et al (1974) Complete control of the lipid envirenment of membrane-bound proteins: application to a calcium transport system. FEBS Lett 4:160–162
Le Maire M, Lind KE, Jørgensen KE et al (1978) Enzymatically Active Ca2+ ATPase from Sarcoplasmic Reticulum Membranes, Solubilized by Nonionic Detergents. J Biol Chem 253:7051–7060
Acknowledgement
We would like to thank Jesper Vuust Møller for comments and discussion in the preparation of this book chapter.
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Drachmann, N.D., Olesen, C. (2016). Lipid Exchange by Ultracentrifugation. In: Bublitz, M. (eds) P-Type ATPases. Methods in Molecular Biology, vol 1377. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-3179-8_35
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DOI: https://doi.org/10.1007/978-1-4939-3179-8_35
Publisher Name: Humana Press, New York, NY
Print ISBN: 978-1-4939-3178-1
Online ISBN: 978-1-4939-3179-8
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