Collection
Functional Genomics
- Submission status
- Open
- Open for submission from
- 01 January 2020
- Submission deadline
- Ongoing
This is an ongoing topical collection.
Editors
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Francisco Cánovas
Co Editor-in-Chief of Trees
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Ulrich Lüttge
Co Editor-in-Chief of Trees
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Rob Guy
Co Editor-in-Chief of Trees
Articles (34 in this collection)
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Transcriptomics analysis reveals Xanthoceras sorbifolia Bunge leaves’ adaptation strategy to low nitrogen
Authors (first, second and last of 5)
- Xinlin Li
- Jixiang Zou
- Hua Jin
- Content type: Original Article
- Published: 22 June 2023
- Pages: 1153 - 1166
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Genome-wide identification and functional analysis of the peach (P. persica) laccase gene family reveal members potentially involved in endocarp lignification
Authors (first, second and last of 10)
- Keli Qui
- Hui Zhou
- Jinling He
- Content type: Original Article
- Published: 03 April 2022
- Pages: 1477 - 1496
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Single nucleotide polymorphism discovery and functional annotation analysis of blackberry fruit
Authors (first, second and last of 6)
- Yaqiong Wu
- Chunhong Zhang
- Lianfei Lyu
- Content type: Original Article
- Published: 23 March 2022
- Pages: 1313 - 1324
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Flavonoid components and gene expression analysis reveal flower pigmentation difference between Magnolia biondii and its variety M. biondii var. purpurascens
Authors (first, second and last of 13)
- Ning-hang Wang
- Meng-yi Dai
- Ya-mei Shen
- Content type: Original Article
- Published: 28 October 2021
- Pages: 583 - 591
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Metabolite profiling in albino tea mutant Camellia sinensis ‘Fuyun 6’ using LC–ESI–MS/MS
Authors (first, second and last of 8)
- Xinying Lin
- Xuejin Chen
- Naixing Ye
- Content type: Original Article
- Published: 28 August 2021
- Pages: 261 - 272
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Genomic insights into growth and development of bamboos: what have we learnt and what more to discover?
Authors (first, second and last of 9)
- Mridushree Basak
- Smritikana Dutta
- Malay Das
- Content type: Review
- Published: 21 August 2021
- Pages: 1771 - 1791
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GC–MS fingerprints of essential oils from agarwood grown in wild and artificial environments
Authors (first, second and last of 5)
- Cheng-piao Tian
- Xing-dong Yao
- Ai-qun Wu
- Content type: Original Article
- Published: 23 July 2021
- Pages: 2105 - 2117
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Transcriptome and morpho-physiological analyses reveal factors regulating cone bud differentiation in Qinghai spruce (Picea crassifolia Kom.)
Authors (first, second and last of 6)
- Tianqing Zhu
- Jiwen Hu
- Junhui Wang
- Content type: Original Article
- Published: 05 May 2021
- Pages: 1151 - 1166
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Transcriptome of weeping pinyon pine, Pinus pinceana, shows differences across heterogeneous habitats
Authors (first, second and last of 4)
- Laura Figueroa-Corona
- Patricia Delgado Valerio
- Daniel Piñero
- Content type: Original Article
- Published: 19 April 2021
- Pages: 1351 - 1365
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Exogenous melatonin-stimulated transcriptomic alterations of Davidia involucrata seedlings under drought stress
Authors (first, second and last of 5)
- Qinsong Liu
- Zhiqiang Feng
- Xiao Xu
- Content type: Original Article
- Published: 01 March 2021
- Pages: 1025 - 1038
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Expression of the SPL-like gene LaSPL9 in Japanese larch (Larix leptolepis) is regulated by miR156 during somatic embryogenesis
Authors (first, second and last of 5)
- Li-feng Zhang
- Yan-ru Fan
- Su-ying Han
- Content type: Short Communication
- Published: 15 January 2021
- Pages: 1727 - 1737
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Transcriptome sequencing and gene expression profiling of Populus wutunensis, a natural hybrid, during salinity stress
Authors
- Jixiang Zou
- Hua Jin
- Content type: Original Article
- Published: 03 August 2020
- Pages: 1427 - 1438
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Genome-wide characterization and development of simple sequence repeat markers for genetic studies in pomegranate (Punica granatum L.)
Authors (first, second and last of 12)
- Prakash G. Patil
- N. V. Singh
- Jyotsana Sharma
- Content type: Original Article
- Published: 12 April 2020
- Pages: 987 - 998
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Genome-wide identification of multifunctional laccase gene family in Eucalyptus grandis: potential targets for lignin engineering and stress tolerance
Authors (first, second and last of 8)
- Mariana L. C. Arcuri
- Larissa C. Fialho
- Ivan G. Maia
- Content type: Original Article
- Published: 15 February 2020
- Pages: 745 - 758
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Molecular cloning and biochemical characterization of a Tau class glutathione S-transferase from Pinus brutia Ten
Authors (first, second and last of 4)
- Meltem Alper
- Elif Öztetik
- Feray Köçkar
- Content type: Original Article
- Published: 14 February 2020
- Pages: 835 - 843
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Molecular cloning and functional analysis of the BplSPL1 gene from Betula platyphylla Suk.
Authors (first, second and last of 7)
- Jing Tian
- Xiaoqing Hu
- Xuemei Liu
- Content type: Original Article
- Published: 05 February 2020
- Pages: 801 - 811
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Genetic diversity in the endangered Camellia nitidissima assessed using transcriptome-based SSR markers
Authors (first, second and last of 5)
- Xin-lei Li
- Jie Wang
- Heng-fu Yin
- Content type: Original Article
- Published: 26 November 2019
- Pages: 543 - 552
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De novo transcriptomic analysis of light-induced flavonoid pathway, transcription factors in the flower buds of Lonicera japonica
Authors (first, second and last of 8)
- Hailing Fang
- Xiwu Qi
- Xin Liu
- Content type: Original Article
- Published: 02 November 2019
- Pages: 267 - 283
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Genome-wide analysis of the poplar NF-Y gene family and its expression in floral bud development of Populus tomentosa
Authors (first, second and last of 8)
- Juan Li
- Kai Gao
- Xinmin An
- Content type: Original Article
- Published: 28 October 2019
- Pages: 285 - 296
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Identification, molecular characterization, and expression analysis of the SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) gene family in Betula platyphylla Suk.
Authors (first, second and last of 8)
- Xiaoqing Hu
- Chuang Liu
- Xuemei Liu
- Content type: Original Article
- Published: 27 September 2019
- Pages: 229 - 241
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Selection and verification of candidate reference genes for gene expression by quantitative RT-PCR in Hibiscus hamabo Sieb.et Zucc.
Authors (first, second and last of 6)
- Longjie Ni
- Zhiquan Wang
- Chunsun Gu
- Content type: Original Article
- Published: 25 June 2019
- Pages: 1591 - 1601
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Isolation and characterisation of Ty1-copia retrotransposons from Pongamia pinnata
Authors
- Rahul G. Shelke
- Latha Rangan
- Content type: Original Article
- Published: 06 June 2019
- Pages: 1559 - 1570
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Development and validation of EST-SSR markers of Magnolia wufengensis using de novo transcriptome sequencing
Authors (first, second and last of 7)
- Li Wang
- Xiaoqiang Gong
- Luyi Ma
- Content type: Original Article
- Published: 02 May 2019
- Pages: 1213 - 1223
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Anatomy and transcriptome analysis in leaves revealed how nitrogen (N) availability influence drought acclimation of Populus
Authors (first, second and last of 9)
- Mei Lu
- Mengmeng Chen
- Yi Zhang
- Content type: Original Article
- Published: 11 April 2019
- Pages: 1003 - 1014
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Genome-wide identification of WOX genes and their expression patterns under different hormone and abiotic stress treatments in tea plant (Camellia sinensis)
Authors (first, second and last of 7)
- Pengjie Wang
- Yongchun Guo
- Naixing Ye
- Content type: Original Article
- Published: 11 April 2019
- Pages: 1129 - 1142
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Identification and characterization of dwarf mistletoe responding genes in Ziarat juniper tree (Juniperus excelsa M.Bieb) through suppression subtractive hybridization and deep sequencing
Authors
- Humaira Abdul Wahid
- Muhammad Younas Khan Barozai
- Muhammad Din
- Content type: Original Article
- Published: 04 April 2019
- Pages: 1027 - 1039
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Diversification and geographical distribution of Psidium (Myrtaceae) species with distinct ploidy levels
Authors (first, second and last of 8)
- Amélia Carlos Tuler
- Tatiana Tavares Carrijo
- Wellington Ronildo Clarindo
- Content type: Original Article
- Published: 02 April 2019
- Pages: 1101 - 1110
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SNP development and diversity analysis for Ginkgo biloba based on transcriptome sequencing
Authors (first, second and last of 5)
- Yaqiong Wu
- Qi Zhou
- Li-an Xu
- Content type: Original Article
- Published: 02 January 2019
- Pages: 587 - 597
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Genome-wide identification and characterization of growth-regulating factors in mulberry (Morus spp.)
Authors (first, second and last of 4)
- M. S. Rukmangada
- R. Sumathy
- V. Girish Naik
- Content type: Original Article
- Published: 27 July 2018
- Pages: 1695 - 1705
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Somatic hybridization between diploid Poncirus and Citrus improves natural chilling and light stress tolerances compared with equivalent doubled-diploid genotypes
Authors (first, second and last of 11)
- Julie Oustric
- Raphaël Morillon
- J.érémie Santini
- Content type: Original Article
- Published: 15 March 2018
- Pages: 883 - 895
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Development and validation of SSR markers based on transcriptome sequencing of Casuarina equisetifolia
Authors (first, second and last of 7)
- Nan Li
- Yong-Qi Zheng
- Hai-Bo Li
- Content type: Original Article
- Published: 29 August 2017
- Pages: 41 - 49
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Sequence characterization and expression analysis of NAC genes from Betula platyphylla
Authors (first, second and last of 4)
- Huiyan Guo
- Zhiyuan Cui
- Chao Wang
- Content type: Original Article
- Published: 18 August 2017
- Pages: 1919 - 1931
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Association analysis for pomological traits in mango (Mangifera indica L.) by genic-SSR markers
Authors (first, second and last of 7)
- Shiv Lal
- Anand Kumar Singh
- Nagendra Kumar Singh
- Content type: Original Article
- Published: 02 May 2017
- Pages: 1391 - 1409