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Making iPS Cells in the Laboratory

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Craft in Biomedical Research
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Abstract

In this chapter, the focus is turned from the hypothetical and anticipatory perspective of stem cell-based clinical translation to the “realities” of laboratory life with human pluripotent stem cells. Here practical challenges of instrumentalizing the artificially created iPS cell lines and their volatile and fickle vitality become poignant. The chapter describes the discovery of the revolutionary method of cellular reprogramming, followed by the analyses on what is required of biomedical craftwork to make use of the new biological tool and how this work is conditioned by and dependent on the bourgeoning life science industry. Theorizing laboratory labor through pragmatist discussion on craftwork, the chapter shows that biomedical research is essentially an embodied craft and the skill of cellular reprogramming begins as bodily practices.

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Notes

  1. 1.

    I have chosen to keep with the idea of constitutive relationality proposed by Haraway for the sake of conceptual clarity. However, constitutive relations between humans and nonhumans have been deliberated in many ways in the field of STS and feminist science studies in particular, and I acknowledge that the discussion in this chapter could be framed also in relation to Karen Barad’s conceptual work on humans, technologies, and science. Like much of Haraway’s work, Barad’s theory on intra-action aims to advance the philosophical premise that “humans enter not fully formed, preexisting subjects but as subjects intra-actively co-constituted through the material-discursive practices that they engage in” (Barad 2007, p. 168). Furthermore, Barad thinks that agency does not reside in humans only nor aligns mainly with intentionality or subjectivity (see also Chap. 1).

  2. 2.

    When inserted into the cell with the help of viral vectors, the reprogramming genes initiate a transcription network in the inner cell mass that is essential for pluripotency. The inserted genes bind to so-called target genes in the DNA which have a role in either upregulating pluripotency or downregulating lineage commitment. This commences a transcriptional regulatory network, thereby controlling the flow of genetic information from DNA to messenger RNA concerning pluripotency and differentiation (Babu et al. 2004; Gilbert 2010; Mikkola 2012).

  3. 3.

    I am aware of the problematic of depicting the first findings on iPS cells in such a concise way, suggesting a linear and “unmessy” story of research developments within the field of stem cell science. If we take the lessons of STS seriously, the emergence of the new tool cannot be such a tidy process. My access to the initial making of the iPS cells and the reprogramming method is however limited to scientific publications, which tell the history of scientific discovery in a rather restricted way, omitting much of the wider constellations of, for example, cultural and political interests. Later in the chapter I will hopefully be able to pluralize the view on the emergence of the iPS cell technology with the accounts and experiences from laboratories trying to make the tool work. Nevertheless, a detailed sociohistory of the iPS cell technology remains to be written, where “various constituencies” (Jordan and Lynch 1998) associated with the technology could be traced, including the local and global efforts to “find” the way to reprogram cells and to outperform others in this competition.

  4. 4.

    The ability of a particular stem cell to generate numerous different types of differentiated cells is its potency. Cells are classified according to the grade of their potency from totipotent to pluri- and multipotent to more limited differentiation potential (Gilbert 2010). Pluripotent stem cells can both renew themselves and become all the cell types that are found in an implanted embryo, fetus, or developed organism. IPS cells have been classified as one of five pluripotent stem cell types that have been characterized thus far. The other four are embryonic carcinoma cells, embryonic germ cells, embryonic stem cells, and adult testis-derived germline stem cells (Mikkola 2012). The category of pluripotency, however, is a sustained topic of discussion in the field of stem cell research since it has been used as a vital demarcation criterion separating the embryonic stem cell research from somatic or adult stem cell research. Research has shown that the criteria of pluripotency are not given but rather constantly challenged with the interplay of new biological knowledge, practical expertise, and ethical and legal debates (e.g. Eriksson and Webster 2008; Hogle 2010; Meskus and de Miguel Beriain 2013).

  5. 5.

    In the case of stem cell tools, and from the perspective of scientific craftwork, the distinction between the creation and use of the tool is problematic and even misleading as both phases involve substantial genetic manipulation and similar challenges of cell culture and maintenance. It must be emphasized, however, that I focus on the local generation of the tool while leaving out of the picture the subsequent uses of iPS cell lines in generating differentiated patient-specific cell lines, such as neuronal, cardiac or pancreatic cell lines. During the early years of the iPS cell technology, research laboratories I visited were still struggling in generating fully characterized, functional and caryotypically normal iPS cell lines. Thus, my analysis is centered more on the situated creation of the novel cellular tool than its further uses in differentiation experiments.

  6. 6.

    Scientific work on stem cells requires so-called healthy wild-type control cells, in order to conduct comparisons with the created disease-specific cell lines (e.g. Saha and Jaenisch 2009).

  7. 7.

    Only those lines, which work in the experiments, are reported in scientific papers, indicating the phenomenon of data bias in research publications. This problem does not pertain only to stem cells science, but is rather a common feature in scientific publishing. According to John P. Ioannidis’s (2005) famously critical analysis of the publication system, it stems from the fallacy of viewing negative data or failures to replicate experiments as uninteresting or harmful pieces of information (see Meskus et al. 2017).

  8. 8.

    In Epistemic Cultures (2000, pp. 283–285) Karin Knorr Cetina reports a discussion she had with an artist-philosopher on the anthropomorphic classifications she noted in her study on experimental high energy physics. I confess having experienced similar frustration as Knorr Cetina does in the face of arguments that humanizing and personifying characterizations of nonhumans are “merely” a sign of anthropomorphization. These arguments often relate to anthropomorphism having become a sign of unscientific approach (Horowitz 2007). I agree with Knorr Cetina that the term does not itself explain anything and that the phenomenon cannot be explained away as being “just” that. Knorr Cetina tackles the question by emphasizing anthropomorphic classifications as systematic patterns of scientists relating to their objects in situations where technical vocabulary turns out narrow and inadequate. My line of analysis does not focus on the vocabulary as such but on the embodied relations stem cell science as a field of practice produces and demands. Writing about human-animal relationships and empirical testing of anthropomorphisms, Alexandra Horowitz (2007) notes that it is often professional observers of animals, who with exposure and despite their training are more likely to anthropomorphize. Turning to cells and the history of tissue culture, Hannah Landecker (2009) shows that personification of cell lines as well as endowing individualized identity and intentional action to cell-level phenomena has been a visible tendency in the scientific literature. Landecker argues that it should not be dismissed as simplification for the purposes of popularization. Rather, it is part of the scientists’ relation to the material they are working with, however biased the descriptions may be. Agreeing with this interpretation I suggest that in the case if iPS cell culture, anthropomorphizing accounts of cell behavior underscore the point about the variable vitality of the research material. IPS cell populations produced in the lab are substantially manipulated living material the vitality of which researchers experience as full of character.

  9. 9.

    I attempted to get the right to reprint the figure from Lonza. For a few weeks, it looked as if the permission would be granted; however, before the final signing of the permission request form, the product manager in charge and the company legal department wanted to review the text section I was intending to illustrate with the image. Unfortunately, they decided to withdraw the permission but kindly offered a detailed reason for the decision, which is informative to disclose here. The e-mail I received stated that while the Lonza personnel agreed with my “underlying premise that research progress is not in the long term benefited by shortcuts”, they argued that this premise is not “universal” in the sense that “Lonza can and does provide valuable products/services that speed up research progress without impacting scientific growth through experience”. The response further reads, “there is absolutely high value for beginning grad students/post docs, or any investigator starting in a new research area to ‘explore the maze’ as you suggest. But once past that early learning and understanding stage (e.g. iPSC generation/differentiation), it does make sense to utilize the broader life science community and take advantage of specialized expertise and products.” Therefore, it was felt in the company that, even if perhaps inadvertently, the way I was intending to use the image would “potentially reflect negatively on our brand and products” (e-mail exchange with Lonza marketing communications department, 26 June 2017). Although I do not find my analysis significantly different or conflictual to Lonza’s interpretation , I agree with the company’s view that the effect of using ready-made products in developing researchers skills and getting experienced with a new technology changes with time and practice gained. However, this does not omit the general dilemma of learning by experience in biomedical research, which emerges through hands-on experiments with the living cellular material. As biomedical research is increasingly embedded in and dependent on the life science industry also in the labor-intensive field of stem cell science, the enabling and disabling effects of this development need to be studied further.

References

  • Aalto-Setälä, K., Conklin, B. R., & Lo, B. (2009). Obtaining consent for future research with induced pluripotent cells: Opportunities and challenges. PLoS Biology, 7(2), 0204–0208.

    Article  Google Scholar 

  • Babu, M. M., Luscombe, N. M., Aravind, L., et al. (2004). Structure and evolution of transcriptional regulatory networks. Current Opinion in Structural Biology, 14(3), 283–291.

    Article  Google Scholar 

  • Barad, K. (2007). Meeting the universe halfway: Quantum physics and the entanglement of matter and meaning. Durham: Duke University Press.

    Book  Google Scholar 

  • Canguilhem, G. (2008). In P. Marrati & T. Meyers (Eds.), Knowledge of life. New York: Fordham University Press.

    Google Scholar 

  • Cooper, M. (2008). Life as surplus: Biotechnology & capitalism in the neoliberal era. Seattle: University of Washington Press.

    Google Scholar 

  • Dewey, J. (2008). Experience and education. In J. A. Boydston (Ed.), John Dewey. The later works, 1925–1953. Volume 13: 1938–1939 (pp. 1–62). Carbondale: Southern Illinois University Press.

    Google Scholar 

  • Doing, P. (2008). Give me a laboratory and I will raise a discipline: The past, present, and future politics of laboratory studies in STS. In E. J. Hackett, O. Amsterdamska, M. Lynch, & J. Wajcman (Eds.), The handbook of science and technology studies (Third ed., pp. 279–295). Cambridge: The MIT Press.

    Google Scholar 

  • Eriksson, L., & Webster, A. (2008). Standardizing the unknown: Practicable pluripotency as doable futures. Science as Culture, 17(1), 57–69.

    Article  Google Scholar 

  • Eriksson, L., & Webster, A. (2015). Standardizing work as a recursive process: Shaping the embryonic stem cell field. New Genetics and Society, 34(1), 72–88.

    Article  Google Scholar 

  • EuroStemCell, iCeMS, Elsevier. (2013). Stem cell research: Trends and perspectives on the evolving international landscape. Available at: http://www.eurostemcell.org/files/Stem-Cell-Report-Trends-and-Perspectives-on-the-Evolving-International-Landscape_Dec2013.pdf

  • Franklin, S. (2007). Dolly mixtures: The remaking of genealogy. Durham/London: Duke University Press.

    Book  Google Scholar 

  • Franklin, S. (2013). Biological relatives: IVF, stem cells, and the future of kinship. Durham: Duke University Press.

    Google Scholar 

  • Fujimura, J. (1996). Crafting science: A sociohistory of the quest for the genetics of cancer. Cambridge/London: Harvard University Press.

    Book  Google Scholar 

  • Gane, N. (2006). When we have never been human, what is to be done? Interview with Donna Haraway. Theory, Culture & Society, 23(7/8), 135–158.

    Article  Google Scholar 

  • Gilbert, S. F. (2010). Developmental biology (9th ed.). Sunderland: Sinauer Associates.

    Google Scholar 

  • Gurdon, J. B. (1962). The developmental capacity of nuclei taken from intestinal epithelium cells of feeding tadpoles. Journal of Embryology and Experimental Morphology, 10, 622–640.

    Google Scholar 

  • Gurdon, J. B., Laskey, R. A., & Reeves, O. R. (1975). The developmental capacity of nuclei transplanted from keratinized skin cells of adult frogs. Journal of Embryology and Experimental Morphology, 34(1), 93–112.

    Google Scholar 

  • Haraway, D. J. (1991). Simians, cyborgs, and women: The reinvention of nature. London: Free Association Books.

    Google Scholar 

  • Helosvuori, E. (2018). Assembling viability: The art of mundane embryo selection in IVF. BioSocieties. https://doi.org/10.1057/s41292-018-0114-3.

  • Hogle, L. F. (2010). Characterizing human embryonic stem cells: Biological and social markers of identity. Medical Anthropology Quarterly, 24(4), 433–450.

    Article  Google Scholar 

  • Horowitz, A. (2007). Anthropomorphism. In M. Bekoff (Ed.), Encyclopedia of human-animal relationships (pp. 60–66). Westport: Greenwood Publishing Group.

    Google Scholar 

  • Hyun, I. (2008). Stem cells. In M. Crowley (Ed.), From birth to death and bench to clinic: The Hastings Center bioethics briefing book for journalists, policymakers, and campaigns (pp. 159–162). The Hastings Center: Garrison.

    Google Scholar 

  • Ioannidis, J. P. A. (2005). Why most published research findings are false. PLoS Medicine, 2(8), e124.

    Article  Google Scholar 

  • Jasanoff, S. (2005). Designs on nature: Science and democracy in Europe and the United States. Princeton/Oxford: Princeton University Press.

    Book  Google Scholar 

  • Jent, K. (2017). Making stem cell niches: An ethnography of regenerative medicine in Scotland and the United States. Doctoral dissertation, St Catharine’s College, University of Cambridge.

    Google Scholar 

  • Jordan, K., & Lynch, M. (1998). The dissemination, standardization and routinization of a molecular biological technique. Social Studies of Science, 28(5/6), 773–800.

    Article  Google Scholar 

  • Kleinman, D. L. (2003). Impure cultures: University biology and the world of commerce. Madison: The University of Wisconsin Press.

    Google Scholar 

  • Knorr Cetina, K. (1981). The manufacture of knowledge: An essay on the constructivist and contextual nature of science. Oxford: Pergamon Press.

    Google Scholar 

  • Knorr Cetina, K. (1992). The couch, the cathedral, and the laboratory: On the relationship between experiment and laboratory in science. In A. Pickering (Ed.), Science as practice and culture (pp. 113–138). Chicago/London: The University of Chicago Press.

    Google Scholar 

  • Knorr Cetina, K. (2000). Epistemic cultures: How the sciences make knowledge. Cambridge, MA: Harvard University Press.

    Google Scholar 

  • Kohler, R. E. (1994). Lords of the fly: Drosophila genetics and the experimental life. Chicago: The University of Chicago Press.

    Google Scholar 

  • Krupalnik, V., & Hanna, J. H. (2014). The quest for the perfect reprogrammed cell. Nature, 511(7508), 160–162.

    Article  Google Scholar 

  • Landecker, H. (2003). On beginning and ending with apoptosis: Cell death and biomedicine. In S. Franklin & M. Lock (Eds.), Remaking life and death. Toward anthropology of the biosciences (pp. 23–59). Santa Fe/Oxford: School of American Press/James Currey.

    Google Scholar 

  • Landecker, H. (2009). Culturing life: How cells became technologies. Cambridge, MA: Harvard University Press.

    Google Scholar 

  • Latour, B. (1983). Give me a laboratory and I will raise the world. In K. Knorr-Cetina & M. Mulkay (Eds.), Science observed: Perspectives on the social study of science (pp. 141–170). London: Sage.

    Google Scholar 

  • Latour, B., & Woolgar, S. (1986). Laboratory life: The construction of scientific facts. Princeton: Princeton University Press.

    Google Scholar 

  • Life Technologies. (2017). Essential 8™ medium. Product overview. Available at: https://www.thermofisher.com/

  • Lynch, M. (1985). Art and artifact in laboratory science: A study of shop work and shop talk in a research laboratory. London: Routledge & Kegan Paul.

    Google Scholar 

  • Mattout, A., Biran, A., & Meshorer, E. (2011). Global epigenetic changes during somatic cell reprogramming to iPS cells. Journal of Molecular Cell Biology, 3(6), 341–350.

    Article  Google Scholar 

  • Meskus, M., & de Miguel Beriain, I. (2013). Embryo-like features of induced pluripotent stem cells defy legal and ethical boundaries. Croatian Medical Journal, 54(6), 589–591.

    Article  Google Scholar 

  • Meskus, M., Marelli, L., & D’Agostino, G. (2017). Research misconduct in the age of open science: The case of STAP stem cells. Science as Culture. https://doi.org/10.1080/09505431.2017.1316975.

  • Mikkola, M. (2012). Human pluripotent stem cells: Glycomic approaches for culturing and characterization. Helsinki: Unigrafia Oy.

    Google Scholar 

  • Myers, N. (2008). Molecular embodiments and the body-work of modeling in protein crystallography. Social Studies of Science, 38(2), 163–199.

    Article  Google Scholar 

  • Myers, N. (2015). Rendering life molecular: Models, modelers, and excitable matter. Durham/London: Duke University Press.

    Book  Google Scholar 

  • Nobel Prize Press Release. (2012, October 8). The Nobel Assembly at Karolinska Institutet Press Release. Available at: http://www.nobelprize.org/nobel_prizes/medicine/laureates/2012/press.html

  • Obokata, H., Wakayama, T., Sasai, Y., et al. (2014a). Stimulus-triggered fate conversion of somatic cells into pluripotency. Nature, 505(7485), 641–647. Retracted 03 July 2014.

    Article  Google Scholar 

  • Obokata, H., Sasai, Y., Niwa, H., et al. (2014b). Bidirectional developmental potential in reprogrammed cells with acquired pluripotency. Nature, 505(7485), 676–680. Retracted 03 July 2014.

    Article  Google Scholar 

  • Petryna, A., & Kleinman, A. (2007). The pharmaceutical nexus. In A. Petryna, A. Lakoff, & A. Kleinman (Eds.), Global pharmaceuticals: Ethics, markets, practices (pp. 1–32). Durham/London: Duke University Press.

    Google Scholar 

  • Rabinow, P. (1996). Making PCR: A story of biotechnology. Chicago: The University of Chicago Press.

    Google Scholar 

  • Ravetz, J. R. (1996 [1971]). Scientific knowledge and its social problems. New Brunswick/London: Transaction Publishers.

    Google Scholar 

  • Rose, N. (2007). The politics of life itself. Biomedicine, power and subjectivity in the twenty-first century. Princeton: Princeton University Press.

    Book  Google Scholar 

  • Saha, K., & Jaenisch, R. (2009). Technical challenges in using human induced pluripotent stem cells to model disease. Cell Stem Cell, 5(6), 584–595.

    Article  Google Scholar 

  • Sánchez Alvarado, A., & Yamanaka, S. (2014). Rethinking differentiation: Stem cells, regeneration, and plasticity. Cell, 157(1), 110–119.

    Article  Google Scholar 

  • Scudellari, M. (2016). How iPS cells changed the world. Nature, 534(7607), 310–312.

    Article  Google Scholar 

  • Sennett, R. (2008). The craftsman. New Haven/London: Yale University Press.

    Google Scholar 

  • Sennett, R. (2012). Together: The rituals, pleasures and politics of cooperation. New Haven/London: Yale University Press.

    Google Scholar 

  • Shapin, S. (2008). The scientific life: A moral history of a late modern vocation. Chicago/London: The University of Chicago Press.

    Book  Google Scholar 

  • Stephens, N., Atkinson, P., & Glasner, P. (2011). Documenting the doable and doing the documented: Bridging strategies at the UK Stem Cell Bank. Social Studies of Science, 41(6), 791–813.

    Article  Google Scholar 

  • Sunder Rajan, K. (2012). Lively capital: Biotechnologies, ethics, and governance in global markets. Durham: Duke University Press.

    Book  Google Scholar 

  • Takahashi, K., & Yamanaka, S. (2006). Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors. Cell, 126(4), 663–676.

    Article  Google Scholar 

  • Takahashi, K., & Yamanaka, S. (2016). A decade of transcription factor-mediated reprogramming of pluripotency. Nature Reviews. Molecular Cell Biology, 17(3), 183–193.

    Article  Google Scholar 

  • Takahashi, K., Tanabe, K., Ohnuki, M., et al. (2007). Induction of pluripotent stem cells from adult human fibroblasts by defined factors. Cell, 131(5), 861–872.

    Article  Google Scholar 

  • Thompson, C. (2005). Making parents: The ontological choreography of reproductive technologies. Cambridge: The MIT Press.

    Google Scholar 

  • Thompson, C. (2013). Good science: The ethical choreography of stem cell research. Cambridge, MA: The MIT Press.

    Google Scholar 

  • Timmermans, S., & Berg, M. (1997). Standardization in action: Achieving local universality through medical protocols. Social Studies of Science, 27(2), 273–305.

    Article  Google Scholar 

  • Toivonen, S., Ojala, M., Hyysalo, S., et al. (2013). Comparative analysis of targeted differentiation of human induced pluripotent stem cells (hiPSCs) and human embryonic stem cells reveals variability associated with incomplete transgene silencing in retrovirally derived hiPSC lines. Stem Cells Translational Medicine, 2(2), 83–93.

    Article  Google Scholar 

  • Tonge, P. D., Corso, A. J., Monetti, C., & others. (2014). Divergent reprogramming routes lead to alternative stem-cell states. Nature, 516(7530), 192–197.

    Article  Google Scholar 

  • University of Helsinki. (2012). Reprogramming of fibroblasts into iPSC using Sendai viruses (Cytotune). Compiled by R. Trokovic. Available at: https://www.helsinki.fi/en/researchgroups/pluripotency-and-disease-modeling/protocols

  • Webster, A., & Eriksson, L. (2008). Governance-by-standards in the field of stem cells: Managing uncertainty in the world of “basic innovation”. New Genetics and Society, 27(2), 99–111.

    Article  Google Scholar 

  • WiCell MTA iPS. (2012). Induced pluripotent stem cells: Material transfer agreement for non-profit recipients. Retrieved from https://www.wicell.org/media/WiCellAgreements/WiCell-iPS-MTA.pdf

  • Yamanaka, S. (2007). Strategies and new developments in the generation of patient-specific pluripotent stem cells. Cell Stem Cell, 1(1), 39–49.

    Article  Google Scholar 

  • Yu, J., Vodyanik, M. A., Smuga-Otto, K., et al. (2007). Induced pluripotent stem cell lines derived from human somatic cells. Science, 318(5858), 1917–1920.

    Article  Google Scholar 

  • Yu, J., Hu, K., Smuga-Otto, K., Tian, S., et al. (2009). Human induced pluripotent stem cells free of vector and transgene sequences. Science, 324(5928), 797–801.

    Article  Google Scholar 

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Meskus, M. (2018). Making iPS Cells in the Laboratory. In: Craft in Biomedical Research. Palgrave Macmillan, New York. https://doi.org/10.1057/978-1-137-46910-6_4

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