Abstract
The aim of the study was to isolate, identify, and analyze the phylogenetic relationship of the secondary metabolite-producing actinobacterial strains isolated from the mangrove ecosystem of Krishna district, Andhra Pradesh. The potent bioactive metabolite-producing strain was isolated and designated as VLK-104. The identification of the strain was carried out by employing the micromorphological, cultural, physiological, and biochemical methods. The antimicrobial efficacy of the strain was evaluated by using four solvents such as chloroform, ethyl acetate, methanol, and acetone. Among the solvents used, ethyl acetate extract exhibited maximum antimicrobial activity, whereas the other solvent extracts showed moderate to minimum activity against the Gram-positive and Gram-negative bacteria and fungi. Phylogenetic analysis of 16S rRNA gene sequence showed that the strain VLK-104 forms a distinct clade within the Nocardiopsis 16S rRNA gene tree and is closely related to Nocardiopsis lucentensis.
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References
Amrita K, Nitin J, Subathra Devi C (2012) Novel bioactive compounds from mangrove derived actinomycetes. Int Res J Pharm 3:25–29
Bérdy J (2012) Thoughts and facts about antibiotics: where we are now and where we are heading. J Antibiot 65:1–11
Bozzola JJ, Russell LD (1999) Electron microscopy principles and techniques for biologists, 2nd edn. Jones & Bartlett, Sudbury
Cappuccino JG, Sherman N (2004) Microbiology, a laboratory manual. Pearson Education, New Delhi, pp 282–283
Goodfellow M, Fiedler HP (2010) A guide to successful bioprospecting: informed by actinobacterial systematics. Antonie Van Leeuwenhoek 98:119–142
Hardesty J, Juang P (2011) Fidaxomicin: a macrocyclic antibiotic for the treatment of Clostridium difficile infection. Pharmacotherapy 31(9):877–886
Holding AJ, Collee JG (1971) Routine biochemical tests. In: Methods in microbiology, vol 6A. Academic Press, London, pp 1–131
Joint I, Mühling M, Querellou J (2010) Culturing marine bacteria—an essential prerequisite for biodiscovery. Microb Biotechnol 3:564–575
Kampfer P, Kroppenstedt RM, Dott W (1991) A numerical classification of the genera Streptomyces and Streptoverticillium using miniaturized physiological tests. J Gen Microbiol 137:1831–1891
Shirling EB, Gottlieb D (1966) Methods for characterization of Streptomyces sp. Int J Syst Bacteriol 16:313–340
Stach JEM, Maldonado LA, Ward AC, Goodfellow M, Bull AT (2003) New primers for the class Actinobacteria: application to marine and terrestrial environments. Environ Microbiol 5:828–841
Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 30(12):2725–2729
Williams ST (1989) In: Williams ST (ed) Bergey’s manual of systematic bacteriology, vol 4. Williams & Wilkins, Baltimore
Acknowledgment
The author was thankful to SERB (Science and Engineering Research Board), New Delhi, for providing the financial support for the present study.
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Naragani, K. (2020). Rare Actinobacteria Nocardiopsis lucentensis VLK-104 Isolated from Mangrove Ecosystem of Krishna District, Andhra Pradesh. In: Khasim, S.M., Long, C., Thammasiri, K., Lutken, H. (eds) Medicinal Plants: Biodiversity, Sustainable Utilization and Conservation. Springer, Singapore. https://doi.org/10.1007/978-981-15-1636-8_33
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DOI: https://doi.org/10.1007/978-981-15-1636-8_33
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